PcyM_1420900 | conserved Plasmodium protein, unknown function

_IDPredictionOTHERSPmTPCS_Position
PcyM_1420900OTHER0.9999360.0000540.000010
No Results

  • Fasta :-

    >PcyM_1420900 MTTMIKLHYDEKNDEEENMIIRCADYETFKSYVLKKYDKIYEIVNYENENINYYSVKWIN FINRRVPILLQNKSGPCPLLCITNILLLRNQLQIDKKIKKISQSFLESKIMNILLESNRK NVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFSNIHSFEYTKGLCIFDMLNIPLYHG WVISSDDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADESSNEKTTILYQLEDVKE EKMDDCDLGKPCERDALMDGPTNNPGGASNSDQKGIPNDTIVDLAKGTNKSTEKNDKKKS INGIPIFPDDLDKISEENFKTTLFQDSSSVHAGTISPLDTDTTKKKNTTFGKKNTSGDAC SSKRRTHSNVINLKQPCSLDLEKATNKYSTETGRKSDGFFVKEGKTPSNLAFSTKKNNAN RNASIGANVNISTIANVVSSISSDNSSGDVNVVTTPKFPEDPLPTTSTSLIPIEYSSEGN TQDRSKKSVLDEKAIRNNELFMESNKIASLTSETVNADIADNYTENSENFIMKNYNTDIN LTPYEIHEAIIISEFLETYKTQLTLVGLKLLRENLNPNQLVAFFRNNHFNTLFKYENKLF LLAADISFLHLSCTWELFDSVDNDTSYYDNNFRCISNQKNLENNLNHSIIYLKNYDRNSA KNNTHCVKSNTSLSTTKKKKKKCTFM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1420900.fa Sequence name : PcyM_1420900 Sequence length : 686 VALUES OF COMPUTED PARAMETERS Coef20 : 2.929 CoefTot : -0.387 ChDiff : 1 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.488 0.094 0.607 MesoH : -0.707 0.271 -0.406 0.235 MuHd_075 : 14.069 6.315 3.966 2.269 MuHd_095 : 17.249 8.977 2.816 2.919 MuHd_100 : 15.684 8.402 2.271 2.792 MuHd_105 : 10.389 6.523 0.869 2.448 Hmax_075 : -15.167 -6.300 -6.484 -0.187 Hmax_095 : -10.800 -3.600 -6.770 0.300 Hmax_100 : -13.000 -5.800 -6.788 -0.280 Hmax_105 : -13.000 -6.100 -6.989 -0.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9893 0.0107 DFMC : 0.9835 0.0165
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 686 PcyM_1420900 MTTMIKLHYDEKNDEEENMIIRCADYETFKSYVLKKYDKIYEIVNYENENINYYSVKWINFINRRVPILLQNKSGPCPLL 80 CITNILLLRNQLQIDKKIKKISQSFLESKIMNILLESNRKNVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFSNIHS 160 FEYTKGLCIFDMLNIPLYHGWVISSDDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADESSNEKTTILYQLEDVKE 240 EKMDDCDLGKPCERDALMDGPTNNPGGASNSDQKGIPNDTIVDLAKGTNKSTEKNDKKKSINGIPIFPDDLDKISEENFK 320 TTLFQDSSSVHAGTISPLDTDTTKKKNTTFGKKNTSGDACSSKRRTHSNVINLKQPCSLDLEKATNKYSTETGRKSDGFF 400 VKEGKTPSNLAFSTKKNNANRNASIGANVNISTIANVVSSISSDNSSGDVNVVTTPKFPEDPLPTTSTSLIPIEYSSEGN 480 TQDRSKKSVLDEKAIRNNELFMESNKIASLTSETVNADIADNYTENSENFIMKNYNTDINLTPYEIHEAIIISEFLETYK 560 TQLTLVGLKLLRENLNPNQLVAFFRNNHFNTLFKYENKLFLLAADISFLHLSCTWELFDSVDNDTSYYDNNFRCISNQKN 640 LENNLNHSIIYLKNYDRNSAKNNTHCVKSNTSLSTTKKKKKKCTFM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......P......................................................................... 560 ................................................................................ 640 .............................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1420900 6 -MTTMIK|LH 0.056 . PcyM_1420900 12 KLHYDEK|ND 0.066 . PcyM_1420900 22 EENMIIR|CA 0.108 . PcyM_1420900 30 ADYETFK|SY 0.066 . PcyM_1420900 35 FKSYVLK|KY 0.098 . PcyM_1420900 36 KSYVLKK|YD 0.143 . PcyM_1420900 39 VLKKYDK|IY 0.064 . PcyM_1420900 57 INYYSVK|WI 0.081 . PcyM_1420900 64 WINFINR|RV 0.119 . PcyM_1420900 65 INFINRR|VP 0.089 . PcyM_1420900 73 PILLQNK|SG 0.058 . PcyM_1420900 89 TNILLLR|NQ 0.077 . PcyM_1420900 96 NQLQIDK|KI 0.057 . PcyM_1420900 97 QLQIDKK|IK 0.095 . PcyM_1420900 99 QIDKKIK|KI 0.082 . PcyM_1420900 100 IDKKIKK|IS 0.095 . PcyM_1420900 109 QSFLESK|IM 0.064 . PcyM_1420900 119 ILLESNR|KN 0.070 . PcyM_1420900 120 LLESNRK|NV 0.098 . PcyM_1420900 132 TASCNYR|KN 0.109 . PcyM_1420900 133 ASCNYRK|NI 0.094 . PcyM_1420900 146 DILPQLK|YG 0.057 . PcyM_1420900 154 GLDVNCK|FS 0.062 . PcyM_1420900 165 HSFEYTK|GL 0.064 . PcyM_1420900 195 MFYSYLK|DY 0.061 . PcyM_1420900 205 YNVIINK|IV 0.073 . PcyM_1420900 208 IINKIVR|YN 0.125 . PcyM_1420900 215 YNEYYER|KK 0.074 . PcyM_1420900 216 NEYYERK|KK 0.079 . PcyM_1420900 217 EYYERKK|KK 0.086 . PcyM_1420900 218 YYERKKK|KN 0.222 . PcyM_1420900 219 YERKKKK|NA 0.206 . PcyM_1420900 228 DESSNEK|TT 0.059 . PcyM_1420900 239 YQLEDVK|EE 0.052 . PcyM_1420900 242 EDVKEEK|MD 0.063 . PcyM_1420900 250 DDCDLGK|PC 0.061 . PcyM_1420900 254 LGKPCER|DA 0.106 . PcyM_1420900 274 ASNSDQK|GI 0.064 . PcyM_1420900 286 TIVDLAK|GT 0.075 . PcyM_1420900 290 LAKGTNK|ST 0.089 . PcyM_1420900 294 TNKSTEK|ND 0.059 . PcyM_1420900 297 STEKNDK|KK 0.067 . PcyM_1420900 298 TEKNDKK|KS 0.121 . PcyM_1420900 299 EKNDKKK|SI 0.261 . PcyM_1420900 313 FPDDLDK|IS 0.067 . PcyM_1420900 320 ISEENFK|TT 0.060 . PcyM_1420900 344 LDTDTTK|KK 0.059 . PcyM_1420900 345 DTDTTKK|KN 0.082 . PcyM_1420900 346 TDTTKKK|NT 0.116 . PcyM_1420900 352 KNTTFGK|KN 0.068 . PcyM_1420900 353 NTTFGKK|NT 0.088 . PcyM_1420900 363 GDACSSK|RR 0.063 . PcyM_1420900 364 DACSSKR|RT 0.152 . PcyM_1420900 365 ACSSKRR|TH 0.190 . PcyM_1420900 374 SNVINLK|QP 0.058 . PcyM_1420900 383 CSLDLEK|AT 0.061 . PcyM_1420900 387 LEKATNK|YS 0.064 . PcyM_1420900 394 YSTETGR|KS 0.089 . PcyM_1420900 395 STETGRK|SD 0.098 . PcyM_1420900 402 SDGFFVK|EG 0.061 . PcyM_1420900 405 FFVKEGK|TP 0.058 . PcyM_1420900 415 NLAFSTK|KN 0.078 . PcyM_1420900 416 LAFSTKK|NN 0.082 . PcyM_1420900 421 KKNNANR|NA 0.160 . PcyM_1420900 457 NVVTTPK|FP 0.072 . PcyM_1420900 484 EGNTQDR|SK 0.148 . PcyM_1420900 486 NTQDRSK|KS 0.060 . PcyM_1420900 487 TQDRSKK|SV 0.674 *ProP* PcyM_1420900 493 KSVLDEK|AI 0.068 . PcyM_1420900 496 LDEKAIR|NN 0.080 . PcyM_1420900 506 LFMESNK|IA 0.064 . PcyM_1420900 533 SENFIMK|NY 0.077 . PcyM_1420900 560 EFLETYK|TQ 0.053 . PcyM_1420900 569 LTLVGLK|LL 0.055 . PcyM_1420900 572 VGLKLLR|EN 0.061 . PcyM_1420900 585 QLVAFFR|NN 0.089 . PcyM_1420900 594 HFNTLFK|YE 0.064 . PcyM_1420900 598 LFKYENK|LF 0.056 . PcyM_1420900 633 YYDNNFR|CI 0.090 . PcyM_1420900 639 RCISNQK|NL 0.069 . PcyM_1420900 653 HSIIYLK|NY 0.057 . PcyM_1420900 657 YLKNYDR|NS 0.078 . PcyM_1420900 661 YDRNSAK|NN 0.074 . PcyM_1420900 668 NNTHCVK|SN 0.076 . PcyM_1420900 677 TSLSTTK|KK 0.061 . PcyM_1420900 678 SLSTTKK|KK 0.138 . PcyM_1420900 679 LSTTKKK|KK 0.099 . PcyM_1420900 680 STTKKKK|KK 0.107 . PcyM_1420900 681 TTKKKKK|KC 0.114 . PcyM_1420900 682 TKKKKKK|CT 0.175 . ____________________________^_________________

  • Fasta :-

    >PcyM_1420900 ATGACAACTATGATCAAACTGCATTATGACGAGAAAAATGACGAAGAAGAGAATATGATT ATTCGGTGCGCCGATTACGAGACGTTCAAATCCTATGTACTAAAAAAATACGACAAAATA TACGAAATTGTAAACTACGAAAATGAAAACATAAACTATTATAGCGTCAAATGGATCAAC TTCATAAATAGGAGAGTACCAATTTTGTTGCAAAATAAAAGCGGACCATGTCCCCTTCTC TGTATTACGAACATTCTGCTTCTACGTAATCAGTTACAGATTGACAAGAAAATTAAAAAA ATATCACAGAGCTTCCTCGAAAGTAAAATTATGAACATACTGTTAGAATCCAATAGAAAA AATGTAACCGATAATACCGCGTCATGTAATTATAGGAAAAACATAATCGAGTGTGTAGAT ATATTGCCCCAGTTAAAATACGGACTTGACGTTAATTGTAAATTTTCTAATATTCATTCA TTTGAGTACACCAAAGGGTTGTGCATTTTTGATATGCTGAATATCCCATTATATCATGGT TGGGTCATCTCGTCAGACGATGTGATGTTTTACTCCTACTTAAAAGATTATTCCTACAAT GTGATAATAAATAAAATTGTGAGATATAATGAATACTACGAGAGAAAGAAGAAAAAAAAT GCAGACGAATCGTCCAATGAGAAAACCACCATTTTGTACCAGTTGGAGGATGTGAAAGAG GAAAAAATGGACGACTGCGATTTGGGAAAACCCTGTGAGAGGGATGCGCTCATGGATGGC CCGACAAATAACCCAGGAGGAGCCTCCAACAGTGATCAGAAAGGTATCCCCAATGATACC ATCGTCGATCTAGCCAAAGGAACAAACAAAAGTACAGAAAAAAATGATAAAAAAAAAAGC ATAAATGGTATACCCATTTTTCCAGATGACCTTGATAAAATTTCAGAAGAAAATTTCAAA ACGACATTATTTCAAGACAGCTCTTCTGTGCACGCTGGTACCATCTCTCCGTTGGATACA GACACAACAAAAAAAAAGAACACAACTTTTGGAAAAAAAAACACGAGTGGAGATGCGTGT AGCAGTAAGAGGAGAACACACAGCAACGTGATTAACTTGAAGCAGCCATGCTCCTTAGAT TTGGAAAAAGCTACAAATAAGTATAGCACCGAAACGGGGAGGAAATCGGACGGATTTTTT GTGAAGGAAGGTAAAACGCCAAGCAATTTGGCCTTCTCTACAAAAAAAAACAACGCCAAT AGGAATGCTTCTATTGGCGCTAATGTAAATATTAGTACCATTGCCAATGTTGTTAGCTCT ATCAGCAGTGATAACAGCAGCGGCGATGTGAACGTGGTAACCACGCCAAAATTTCCGGAG GACCCCCTGCCGACCACCTCCACCAGTCTAATTCCAATTGAATACTCTTCTGAGGGAAAT ACCCAGGATAGGTCAAAAAAATCCGTGTTGGACGAAAAAGCGATCAGAAATAATGAACTA TTCATGGAATCCAACAAAATAGCTAGCTTAACTAGCGAAACGGTGAATGCAGATATAGCA GATAATTACACAGAAAATAGTGAAAATTTTATTATGAAAAATTACAACACAGATATAAAT TTAACTCCATACGAAATTCACGAAGCGATAATCATTTCGGAATTTCTGGAAACGTATAAA ACTCAGTTGACATTAGTTGGGTTGAAATTATTGAGAGAAAATTTGAACCCAAATCAACTT GTAGCCTTTTTCAGGAATAACCATTTTAACACCCTTTTTAAATATGAAAATAAATTATTC CTGCTGGCTGCAGACATTTCCTTTCTACATTTGAGTTGTACATGGGAATTATTTGACAGC GTAGATAATGACACCTCCTACTATGATAACAATTTTAGGTGCATATCGAATCAGAAAAAT TTGGAAAATAATTTAAACCATTCCATTATTTATTTGAAGAATTATGATAGGAATAGTGCC AAAAATAACACGCATTGTGTTAAGTCCAATACGTCCCTTTCCACTACGAAGAAGAAGAAG AAAAAGTGTACCTTTATGTAG
  • Download Fasta

  • Fasta :-

    MTTMIKLHYDEKNDEEENMIIRCADYETFKSYVLKKYDKIYEIVNYENENINYYSVKWIN FINRRVPILLQNKSGPCPLLCITNILLLRNQLQIDKKIKKISQSFLESKIMNILLESNRK NVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFSNIHSFEYTKGLCIFDMLNIPLYHG WVISSDDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADESSNEKTTILYQLEDVKE EKMDDCDLGKPCERDALMDGPTNNPGGASNSDQKGIPNDTIVDLAKGTNKSTEKNDKKKS INGIPIFPDDLDKISEENFKTTLFQDSSSVHAGTISPLDTDTTKKKNTTFGKKNTSGDAC SSKRRTHSNVINLKQPCSLDLEKATNKYSTETGRKSDGFFVKEGKTPSNLAFSTKKNNAN RNASIGANVNISTIANVVSSISSDNSSGDVNVVTTPKFPEDPLPTTSTSLIPIEYSSEGN TQDRSKKSVLDEKAIRNNELFMESNKIASLTSETVNADIADNYTENSENFIMKNYNTDIN LTPYEIHEAIIISEFLETYKTQLTLVGLKLLRENLNPNQLVAFFRNNHFNTLFKYENKLF LLAADISFLHLSCTWELFDSVDNDTSYYDNNFRCISNQKNLENNLNHSIIYLKNYDRNSA KNNTHCVKSNTSLSTTKKKKKKCTFM

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1420900659 SYDRNSAKNN0.996unspPcyM_1420900659 SYDRNSAKNN0.996unspPcyM_1420900659 SYDRNSAKNN0.996unspPcyM_1420900291 SGTNKSTEKN0.991unspPcyM_1420900488 SRSKKSVLDE0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India