PcyM_1429300 | trypsin-like serine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1429300OTHER0.9876340.0117550.000612
No Results

  • Fasta :-

    >PcyM_1429300 MRGTYLWIFYCRTKHLRIQDSFPFLKLRAEQLADNFVRNYGDTINGVKNELKIMCSLCNM SLRMVHVSLCESENSGGERTADGCERSFDCSFDRTFDRSSERTFDRSSECTFDRSSECTF DRSSECTFDRSSECTFEHSPEHRLSDGDHDAPAESDQLEQNTQPEKNDRSKLATHLIIHY VKEYVKYVAHSLLHFYFYLCDTFYRTLSVLSKSYLEFPKQFDYYASISDNLMTSFVTIYK IYKQSNSSEFCFKLDQLAFLGSGFIYDKRGYVLTAAHNITNTEGTFVIKNEDNFYVATLA GLHRESDICVMKINSEEQFSHIPLNSSREFLKPGEPVITYGQIQNFDKETYSIGVVNQPR QTFTKFENFCEKEQTCLYPFIQISNPINKGMSGSPLIDKHGNLVGMIQKKIDNYGLALPV NILKNITTHLQEEGTYKEPFLGIVLREKEQSTSAVYKNCKNELKIEDVLVNSPADVAGIT KGDIMLTINNTGIKNICDVHEILNSTSDGYVTVDIIRHGKNKKIKVKM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1429300.fa Sequence name : PcyM_1429300 Sequence length : 528 VALUES OF COMPUTED PARAMETERS Coef20 : 4.266 CoefTot : -0.422 ChDiff : -9 ZoneTo : 19 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.741 1.259 0.109 0.482 MesoH : -0.457 0.221 -0.389 0.216 MuHd_075 : 21.643 3.381 2.733 4.556 MuHd_095 : 19.832 7.555 4.529 3.789 MuHd_100 : 17.407 8.200 3.593 3.587 MuHd_105 : 8.771 5.604 2.252 1.406 Hmax_075 : 4.500 7.583 -0.386 2.880 Hmax_095 : 9.300 6.500 0.761 3.930 Hmax_100 : 11.700 8.600 0.737 4.090 Hmax_105 : 6.650 7.900 1.272 3.383 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8834 0.1166 DFMC : 0.8388 0.1612
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 528 PcyM_1429300 MRGTYLWIFYCRTKHLRIQDSFPFLKLRAEQLADNFVRNYGDTINGVKNELKIMCSLCNMSLRMVHVSLCESENSGGERT 80 ADGCERSFDCSFDRTFDRSSERTFDRSSECTFDRSSECTFDRSSECTFDRSSECTFEHSPEHRLSDGDHDAPAESDQLEQ 160 NTQPEKNDRSKLATHLIIHYVKEYVKYVAHSLLHFYFYLCDTFYRTLSVLSKSYLEFPKQFDYYASISDNLMTSFVTIYK 240 IYKQSNSSEFCFKLDQLAFLGSGFIYDKRGYVLTAAHNITNTEGTFVIKNEDNFYVATLAGLHRESDICVMKINSEEQFS 320 HIPLNSSREFLKPGEPVITYGQIQNFDKETYSIGVVNQPRQTFTKFENFCEKEQTCLYPFIQISNPINKGMSGSPLIDKH 400 GNLVGMIQKKIDNYGLALPVNILKNITTHLQEEGTYKEPFLGIVLREKEQSTSAVYKNCKNELKIEDVLVNSPADVAGIT 480 KGDIMLTINNTGIKNICDVHEILNSTSDGYVTVDIIRHGKNKKIKVKM 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1429300 2 -----MR|GT 0.095 . PcyM_1429300 12 LWIFYCR|TK 0.080 . PcyM_1429300 14 IFYCRTK|HL 0.066 . PcyM_1429300 17 CRTKHLR|IQ 0.087 . PcyM_1429300 26 DSFPFLK|LR 0.058 . PcyM_1429300 28 FPFLKLR|AE 0.081 . PcyM_1429300 38 LADNFVR|NY 0.136 . PcyM_1429300 48 DTINGVK|NE 0.056 . PcyM_1429300 52 GVKNELK|IM 0.059 . PcyM_1429300 63 LCNMSLR|MV 0.194 . PcyM_1429300 79 ENSGGER|TA 0.179 . PcyM_1429300 86 TADGCER|SF 0.149 . PcyM_1429300 94 FDCSFDR|TF 0.082 . PcyM_1429300 98 FDRTFDR|SS 0.159 . PcyM_1429300 102 FDRSSER|TF 0.087 . PcyM_1429300 106 SERTFDR|SS 0.180 . PcyM_1429300 114 SECTFDR|SS 0.154 . PcyM_1429300 122 SECTFDR|SS 0.154 . PcyM_1429300 130 SECTFDR|SS 0.163 . PcyM_1429300 143 EHSPEHR|LS 0.105 . PcyM_1429300 166 QNTQPEK|ND 0.062 . PcyM_1429300 169 QPEKNDR|SK 0.114 . PcyM_1429300 171 EKNDRSK|LA 0.079 . PcyM_1429300 182 LIIHYVK|EY 0.063 . PcyM_1429300 186 YVKEYVK|YV 0.079 . PcyM_1429300 205 LCDTFYR|TL 0.083 . PcyM_1429300 212 TLSVLSK|SY 0.101 . PcyM_1429300 219 SYLEFPK|QF 0.062 . PcyM_1429300 240 SFVTIYK|IY 0.061 . PcyM_1429300 243 TIYKIYK|QS 0.072 . PcyM_1429300 253 SSEFCFK|LD 0.066 . PcyM_1429300 268 SGFIYDK|RG 0.055 . PcyM_1429300 269 GFIYDKR|GY 0.117 . PcyM_1429300 289 EGTFVIK|NE 0.059 . PcyM_1429300 304 TLAGLHR|ES 0.100 . PcyM_1429300 312 SDICVMK|IN 0.080 . PcyM_1429300 328 IPLNSSR|EF 0.080 . PcyM_1429300 332 SSREFLK|PG 0.080 . PcyM_1429300 348 QIQNFDK|ET 0.071 . PcyM_1429300 360 GVVNQPR|QT 0.123 . PcyM_1429300 365 PRQTFTK|FE 0.081 . PcyM_1429300 372 FENFCEK|EQ 0.060 . PcyM_1429300 389 ISNPINK|GM 0.077 . PcyM_1429300 399 GSPLIDK|HG 0.062 . PcyM_1429300 409 LVGMIQK|KI 0.066 . PcyM_1429300 410 VGMIQKK|ID 0.106 . PcyM_1429300 424 LPVNILK|NI 0.069 . PcyM_1429300 437 QEEGTYK|EP 0.061 . PcyM_1429300 446 FLGIVLR|EK 0.119 . PcyM_1429300 448 GIVLREK|EQ 0.062 . PcyM_1429300 457 STSAVYK|NC 0.086 . PcyM_1429300 460 AVYKNCK|NE 0.063 . PcyM_1429300 464 NCKNELK|IE 0.061 . PcyM_1429300 481 DVAGITK|GD 0.060 . PcyM_1429300 494 INNTGIK|NI 0.074 . PcyM_1429300 517 VTVDIIR|HG 0.067 . PcyM_1429300 520 DIIRHGK|NK 0.129 . PcyM_1429300 522 IRHGKNK|KI 0.086 . PcyM_1429300 523 RHGKNKK|IK 0.101 . PcyM_1429300 525 GKNKKIK|VK 0.083 . PcyM_1429300 527 NKKIKVK|M- 0.078 . ____________________________^_________________

  • Fasta :-

    >PcyM_1429300 ATGAGGGGAACCTACCTGTGGATATTCTACTGCAGAACAAAGCACCTGCGGATTCAGGAC TCTTTCCCCTTTTTGAAGCTGCGTGCTGAACAATTAGCAGACAATTTTGTGCGTAATTAT GGTGACACGATTAATGGTGTAAAAAATGAGCTAAAGATTATGTGCAGTTTGTGTAACATG TCCCTGAGGATGGTTCATGTGTCCCTCTGCGAAAGTGAGAACAGCGGGGGTGAGAGGACT GCCGATGGATGCGAGCGTAGCTTTGATTGTAGCTTTGATCGTACCTTTGATCGTAGCTCT GAGCGTACCTTTGATCGTAGCTCTGAGTGTACCTTTGATCGTAGCTCTGAGTGTACCTTT GATCGTAGCTCTGAGTGTACCTTTGATCGTAGCTCTGAGTGTACCTTTGAGCATAGCCCC GAACATCGCCTCAGTGACGGTGACCATGACGCCCCCGCGGAGAGTGACCAGCTAGAGCAA AATACACAACCCGAAAAAAACGACCGTTCTAAATTAGCAACCCATCTAATAATTCACTAC GTTAAAGAATATGTGAAATATGTTGCCCACTCTTTACTTCATTTTTATTTCTATTTATGT GACACATTTTATCGAACCCTTTCTGTGTTGTCAAAGAGCTATTTAGAATTTCCAAAGCAG TTCGATTATTATGCGTCCATTTCGGACAACCTCATGACCAGCTTTGTTACGATTTATAAA ATCTATAAACAAAGTAACTCTTCAGAATTTTGCTTTAAGTTAGATCAACTGGCATTCTTG GGTTCGGGATTCATTTACGACAAAAGAGGATACGTTCTCACGGCTGCACATAACATAACG AATACAGAGGGCACATTCGTTATCAAAAATGAAGACAACTTTTATGTGGCAACGCTGGCC GGTTTGCACAGGGAATCCGATATATGCGTCATGAAAATTAACTCGGAGGAACAGTTTAGC CACATACCTCTAAACTCCAGCAGGGAATTCTTGAAGCCAGGAGAACCAGTAATCACGTAT GGACAAATACAGAATTTCGATAAAGAGACCTACAGTATCGGTGTCGTAAATCAACCTAGA CAGACCTTCACCAAATTTGAAAACTTTTGTGAAAAGGAGCAAACCTGTTTGTACCCCTTT ATTCAAATAAGCAATCCGATTAACAAAGGCATGTCTGGCTCTCCACTAATCGACAAGCAT GGAAATCTCGTAGGAATGATACAAAAAAAAATTGATAATTACGGGTTGGCCTTGCCCGTG AATATTTTAAAAAACATCACAACCCACTTGCAAGAGGAAGGGACATACAAGGAGCCATTT CTGGGAATTGTCTTGAGAGAAAAAGAGCAAAGTACCTCCGCAGTTTATAAAAATTGCAAA AATGAACTAAAAATAGAAGACGTTTTGGTTAACTCACCTGCGGACGTTGCCGGCATAACG AAAGGAGATATCATGTTGACGATTAACAATACGGGGATTAAAAACATTTGCGATGTGCAC GAAATTTTGAACAGCACATCGGATGGTTACGTCACAGTCGACATTATCCGCCATGGAAAA AACAAAAAAATAAAAGTGAAAATGTGA
  • Download Fasta

  • Fasta :-

    MRGTYLWIFYCRTKHLRIQDSFPFLKLRAEQLADNFVRNYGDTINGVKNELKIMCSLCNM SLRMVHVSLCESENSGGERTADGCERSFDCSFDRTFDRSSERTFDRSSECTFDRSSECTF DRSSECTFDRSSECTFEHSPEHRLSDGDHDAPAESDQLEQNTQPEKNDRSKLATHLIIHY VKEYVKYVAHSLLHFYFYLCDTFYRTLSVLSKSYLEFPKQFDYYASISDNLMTSFVTIYK IYKQSNSSEFCFKLDQLAFLGSGFIYDKRGYVLTAAHNITNTEGTFVIKNEDNFYVATLA GLHRESDICVMKINSEEQFSHIPLNSSREFLKPGEPVITYGQIQNFDKETYSIGVVNQPR QTFTKFENFCEKEQTCLYPFIQISNPINKGMSGSPLIDKHGNLVGMIQKKIDNYGLALPV NILKNITTHLQEEGTYKEPFLGIVLREKEQSTSAVYKNCKNELKIEDVLVNSPADVAGIT KGDIMLTINNTGIKNICDVHEILNSTSDGYVTVDIIRHGKNKKIKVKM

  • title: protein binding site
  • coordinates: F440,L441,G442,I443,L445,N495,I496,V499,H500
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1429300107 STFDRSSECT0.995unspPcyM_1429300107 STFDRSSECT0.995unspPcyM_1429300107 STFDRSSECT0.995unspPcyM_1429300108 SFDRSSECTF0.99unspPcyM_1429300116 SFDRSSECTF0.99unspPcyM_1429300124 SFDRSSECTF0.99unspPcyM_1429300145 SEHRLSDGDH0.998unspPcyM_142930099 STFDRSSERT0.997unspPcyM_1429300100 SFDRSSERTF0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India