PcyM_1457700 | aspartyl protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1457700SP0.0247860.9738320.001382CS pos: 27-28. THN-ET. Pr: 0.3632
No Results

  • Fasta :-

    >PcyM_1457700 MITRLVKMGRIVPLLFALAALLLYTHNETVCSGYHLDEAVRKTPHKFRHSGGGVDGVDDA SMTNRVNAASTTYKVNSASTNNWVNSASTNNWVNSASTNNWVNSGSTASKGNSLIEAKTK NKQDYFSLKLNEQNFRWSVPLLMGSKKKSLQFGVVTSTPITALYCSYNANQSDEMKDLKY EVDESEGVKYVGCKSRHCTAVGNGKSCAPIENLLQMVHDLGLRKKTCTKRFCNYVNDINF LNVNTKLDKKNMSVCSFSSNINWEHIEGFYFRDSFYLYDKVKFDYNHFGCITKSDDLTFN NTISGFIGLAYNRTDATDHSKESPSILHTLVQKSLSKKNIFGLCFIEGGGFASFGGANYE ALKKKVPAVSKLQMGLQHLEADAPIELLADQQATSHEIVWLAYSGTSKNTYNLLLKEVNM VSGTKPLASENGGVAVVDSYSYFLSFPADIAAKLKTAVHTSCVGEGNTCSDIINKGVFTL KNQGVANFPTIELVFHDGKVLIQPKDYLIHEGDGVYRVLINSEGTLKLGIPFFLNKYLIF DNENGKLGVGPSDCAFTLEGTSPGVDLSIAEEGPKEEPEDEYSSEESFFQANKLIILALT SLSVVGGIVGGVYFFS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1457700.fa Sequence name : PcyM_1457700 Sequence length : 616 VALUES OF COMPUTED PARAMETERS Coef20 : 4.843 CoefTot : 0.401 ChDiff : -3 ZoneTo : 27 KR : 3 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.076 2.329 0.470 0.797 MesoH : -0.320 0.358 -0.317 0.249 MuHd_075 : 16.831 14.738 3.611 4.608 MuHd_095 : 20.400 16.882 4.247 4.692 MuHd_100 : 26.882 18.866 6.346 6.051 MuHd_105 : 35.675 23.478 9.048 8.969 Hmax_075 : 19.717 18.100 4.237 5.320 Hmax_095 : 18.900 25.300 4.353 7.520 Hmax_100 : 20.000 23.800 3.305 6.560 Hmax_105 : 19.100 23.800 3.964 7.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4458 0.5542 DFMC : 0.6679 0.3321
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 616 PcyM_1457700 MITRLVKMGRIVPLLFALAALLLYTHNETVCSGYHLDEAVRKTPHKFRHSGGGVDGVDDASMTNRVNAASTTYKVNSAST 80 NNWVNSASTNNWVNSASTNNWVNSGSTASKGNSLIEAKTKNKQDYFSLKLNEQNFRWSVPLLMGSKKKSLQFGVVTSTPI 160 TALYCSYNANQSDEMKDLKYEVDESEGVKYVGCKSRHCTAVGNGKSCAPIENLLQMVHDLGLRKKTCTKRFCNYVNDINF 240 LNVNTKLDKKNMSVCSFSSNINWEHIEGFYFRDSFYLYDKVKFDYNHFGCITKSDDLTFNNTISGFIGLAYNRTDATDHS 320 KESPSILHTLVQKSLSKKNIFGLCFIEGGGFASFGGANYEALKKKVPAVSKLQMGLQHLEADAPIELLADQQATSHEIVW 400 LAYSGTSKNTYNLLLKEVNMVSGTKPLASENGGVAVVDSYSYFLSFPADIAAKLKTAVHTSCVGEGNTCSDIINKGVFTL 480 KNQGVANFPTIELVFHDGKVLIQPKDYLIHEGDGVYRVLINSEGTLKLGIPFFLNKYLIFDNENGKLGVGPSDCAFTLEG 560 TSPGVDLSIAEEGPKEEPEDEYSSEESFFQANKLIILALTSLSVVGGIVGGVYFFS 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1457700 4 ---MITR|LV 0.111 . PcyM_1457700 7 MITRLVK|MG 0.097 . PcyM_1457700 10 RLVKMGR|IV 0.101 . PcyM_1457700 41 HLDEAVR|KT 0.082 . PcyM_1457700 42 LDEAVRK|TP 0.092 . PcyM_1457700 46 VRKTPHK|FR 0.081 . PcyM_1457700 48 KTPHKFR|HS 0.210 . PcyM_1457700 65 DASMTNR|VN 0.102 . PcyM_1457700 74 AASTTYK|VN 0.082 . PcyM_1457700 110 SGSTASK|GN 0.085 . PcyM_1457700 118 NSLIEAK|TK 0.062 . PcyM_1457700 120 LIEAKTK|NK 0.068 . PcyM_1457700 122 EAKTKNK|QD 0.063 . PcyM_1457700 129 QDYFSLK|LN 0.080 . PcyM_1457700 136 LNEQNFR|WS 0.092 . PcyM_1457700 146 PLLMGSK|KK 0.056 . PcyM_1457700 147 LLMGSKK|KS 0.104 . PcyM_1457700 148 LMGSKKK|SL 0.222 . PcyM_1457700 176 NQSDEMK|DL 0.087 . PcyM_1457700 179 DEMKDLK|YE 0.061 . PcyM_1457700 189 DESEGVK|YV 0.091 . PcyM_1457700 194 VKYVGCK|SR 0.073 . PcyM_1457700 196 YVGCKSR|HC 0.139 . PcyM_1457700 205 TAVGNGK|SC 0.094 . PcyM_1457700 223 VHDLGLR|KK 0.058 . PcyM_1457700 224 HDLGLRK|KT 0.079 . PcyM_1457700 225 DLGLRKK|TC 0.093 . PcyM_1457700 229 RKKTCTK|RF 0.062 . PcyM_1457700 230 KKTCTKR|FC 0.185 . PcyM_1457700 246 FLNVNTK|LD 0.062 . PcyM_1457700 249 VNTKLDK|KN 0.057 . PcyM_1457700 250 NTKLDKK|NM 0.078 . PcyM_1457700 272 IEGFYFR|DS 0.115 . PcyM_1457700 280 SFYLYDK|VK 0.060 . PcyM_1457700 282 YLYDKVK|FD 0.073 . PcyM_1457700 293 HFGCITK|SD 0.072 . PcyM_1457700 313 IGLAYNR|TD 0.062 . PcyM_1457700 321 DATDHSK|ES 0.067 . PcyM_1457700 333 LHTLVQK|SL 0.085 . PcyM_1457700 337 VQKSLSK|KN 0.060 . PcyM_1457700 338 QKSLSKK|NI 0.134 . PcyM_1457700 363 ANYEALK|KK 0.058 . PcyM_1457700 364 NYEALKK|KV 0.092 . PcyM_1457700 365 YEALKKK|VP 0.097 . PcyM_1457700 371 KVPAVSK|LQ 0.060 . PcyM_1457700 408 AYSGTSK|NT 0.065 . PcyM_1457700 416 TYNLLLK|EV 0.075 . PcyM_1457700 425 NMVSGTK|PL 0.060 . PcyM_1457700 453 PADIAAK|LK 0.063 . PcyM_1457700 455 DIAAKLK|TA 0.062 . PcyM_1457700 475 CSDIINK|GV 0.082 . PcyM_1457700 481 KGVFTLK|NQ 0.066 . PcyM_1457700 499 LVFHDGK|VL 0.060 . PcyM_1457700 505 KVLIQPK|DY 0.072 . PcyM_1457700 517 EGDGVYR|VL 0.098 . PcyM_1457700 527 NSEGTLK|LG 0.056 . PcyM_1457700 536 IPFFLNK|YL 0.066 . PcyM_1457700 546 FDNENGK|LG 0.054 . PcyM_1457700 575 IAEEGPK|EE 0.057 . PcyM_1457700 593 SFFQANK|LI 0.066 . ____________________________^_________________

  • Fasta :-

    >PcyM_1457700 ATGATAACACGTTTGGTAAAGATGGGACGAATTGTCCCCCTGCTGTTCGCCCTGGCGGCA CTCCTTTTGTACACACACAATGAAACAGTTTGTTCTGGGTATCATTTGGACGAAGCGGTG AGGAAGACGCCTCACAAGTTTCGTCACAGCGGAGGAGGGGTCGACGGGGTGGACGACGCC AGCATGACCAACAGGGTGAACGCCGCCAGCACTACCTACAAGGTGAACTCCGCCAGCACG AACAACTGGGTGAACTCCGCCAGCACGAACAACTGGGTGAACTCCGCCAGCACGAACAAC TGGGTGAACTCCGGCAGCACGGCCAGCAAGGGGAACTCCCTCATAGAAGCGAAAACAAAA AACAAGCAGGACTACTTCAGCTTAAAGCTAAATGAACAGAATTTCAGGTGGAGTGTGCCC CTCTTGATGGGGTCGAAGAAGAAGTCCCTTCAGTTTGGCGTCGTCACGTCCACCCCCATA ACCGCCCTTTACTGTTCCTATAATGCTAATCAGAGTGACGAAATGAAGGATTTAAAATAT GAAGTAGACGAATCAGAAGGTGTAAAATATGTTGGTTGCAAAAGTAGACACTGTACTGCT GTAGGAAATGGCAAATCATGTGCACCGATTGAAAATTTGCTTCAGATGGTTCATGACTTA GGGTTGAGAAAAAAAACTTGTACCAAAAGATTTTGTAACTACGTAAATGATATAAATTTT TTAAATGTTAACACCAAGTTGGACAAGAAGAACATGTCCGTGTGTTCGTTTAGCTCAAAT ATTAATTGGGAACACATAGAGGGCTTTTATTTTAGAGATTCGTTTTACCTGTACGATAAG GTTAAATTCGACTACAACCACTTCGGATGTATAACAAAGAGTGACGACTTGACCTTCAAT AATACCATTTCTGGTTTTATCGGATTAGCATATAACCGTACAGATGCTACTGACCACTCG AAAGAGTCCCCTTCCATTTTGCATACCTTGGTACAGAAGTCTCTGTCTAAGAAGAACATC TTCGGATTATGCTTTATTGAAGGAGGGGGTTTTGCATCCTTCGGTGGAGCTAACTATGAA GCATTAAAGAAGAAGGTCCCAGCTGTATCGAAATTGCAGATGGGTCTTCAACACCTGGAA GCAGATGCCCCGATAGAACTTCTGGCAGACCAGCAAGCCACTTCTCACGAAATTGTGTGG CTCGCATATTCGGGCACTTCCAAGAACACGTACAACCTTCTCTTGAAAGAGGTCAACATG GTGTCGGGCACGAAGCCCCTGGCGAGTGAAAACGGCGGGGTGGCTGTCGTCGATTCATAC AGTTACTTCCTGTCCTTCCCAGCCGATATCGCCGCCAAGCTGAAGACCGCCGTGCACACC TCCTGCGTTGGCGAGGGCAACACCTGCTCCGATATCATTAACAAGGGTGTATTCACACTG AAAAACCAAGGCGTTGCAAACTTCCCCACGATAGAGCTCGTATTCCACGACGGGAAGGTG CTGATTCAGCCCAAGGACTACCTAATCCACGAAGGCGACGGAGTGTATCGAGTTTTGATA AATTCGGAGGGAACCCTCAAGTTAGGGATCCCTTTTTTCCTAAACAAGTATCTCATCTTC GACAATGAAAATGGGAAGCTGGGAGTAGGCCCATCTGATTGCGCCTTCACATTGGAGGGG ACTTCTCCCGGAGTCGATTTGAGCATCGCGGAAGAGGGCCCCAAGGAGGAACCCGAGGAT GAGTACTCATCGGAGGAAAGCTTCTTTCAGGCAAATAAGTTAATCATCCTTGCGCTCACT TCTTTAAGCGTTGTGGGGGGCATTGTCGGGGGCGTTTATTTCTTCAGTTAA
  • Download Fasta

  • Fasta :-

    MITRLVKMGRIVPLLFALAALLLYTHNETVCSGYHLDEAVRKTPHKFRHSGGGVDGVDDA SMTNRVNAASTTYKVNSASTNNWVNSASTNNWVNSASTNNWVNSGSTASKGNSLIEAKTK NKQDYFSLKLNEQNFRWSVPLLMGSKKKSLQFGVVTSTPITALYCSYNANQSDEMKDLKY EVDESEGVKYVGCKSRHCTAVGNGKSCAPIENLLQMVHDLGLRKKTCTKRFCNYVNDINF LNVNTKLDKKNMSVCSFSSNINWEHIEGFYFRDSFYLYDKVKFDYNHFGCITKSDDLTFN NTISGFIGLAYNRTDATDHSKESPSILHTLVQKSLSKKNIFGLCFIEGGGFASFGGANYE ALKKKVPAVSKLQMGLQHLEADAPIELLADQQATSHEIVWLAYSGTSKNTYNLLLKEVNM VSGTKPLASENGGVAVVDSYSYFLSFPADIAAKLKTAVHTSCVGEGNTCSDIINKGVFTL KNQGVANFPTIELVFHDGKVLIQPKDYLIHEGDGVYRVLINSEGTLKLGIPFFLNKYLIF DNENGKLGVGPSDCAFTLEGTSPGVDLSIAEEGPKEEPEDEYSSEESFFQANKLIILALT SLSVVGGIVGGVYFFS

    No Results
  • title: Active site flap
  • coordinates: S258,S259,N260,I261,H265,I266,E267,G268
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1457700336 SQKSLSKKNI0.994unspPcyM_1457700336 SQKSLSKKNI0.994unspPcyM_1457700336 SQKSLSKKNI0.994unspPcyM_1457700583 SEDEYSSEES0.996unspPcyM_1457700113 SSKGNSLIEA0.992unspPcyM_1457700320 SATDHSKESP0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India