_IDPredictionOTHERSPmTPCS_Position
PcyM_1463900OTHER0.9955180.0000130.004469
No Results
  • Fasta :-

    >PcyM_1463900 MFKHYQKAVKRIMNAKYENESFVSTGSDKNCDEENSALLQNKEASGMNKRKSKKSNNDNG KYKYYENFFNKKRNKKWNYFMIFFLGICFGFAIWPFFMTIITYKLFYKDNFNSSNFNTSN SSASLKPYGNDRNKKGENEKVSLKDQSQKNSSPHFRPIRFEEIAGIDESKLELLEVVDFI RNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAK RIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTV HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDK IARLTPGFSGADLENVVNEATILATRNKKSVVTIGELFEARDKVSMGPERKSLRQSDHQR RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLA VCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYS SNRLSAQTISTIEVEVKALVEKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKKII DPNNTRDYSGKVPALSKDTKSDSTSSGPENDKREKNSTRGEGRNTDENRTNVKRTGPSAP NDRHEEKQADTGTPAEELKSASSDNVLKKKGKRGEREKRRHTSTRDNDKIEIVRKDAKNV AKKIKKKYAKDPNVKNKKILKVVNEHKPYDVDRKADGGNLQNKNGKTGLNGSNGSNGPNG PLGKLDKRSYPKGHSPHDDNNNSVVKNMSEVFSKDFASPAEQNGDNESPDYVKAKEMTLN NFKEAVDTSHIKNVGEMKKFNIFEHNLGKLFLFDIFGS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1463900.fa Sequence name : PcyM_1463900 Sequence length : 878 VALUES OF COMPUTED PARAMETERS Coef20 : 3.449 CoefTot : -0.877 ChDiff : 32 ZoneTo : 17 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.647 2.176 0.431 0.938 MesoH : -0.542 0.332 -0.336 0.218 MuHd_075 : 12.132 5.611 2.455 3.447 MuHd_095 : 45.548 24.981 12.232 9.284 MuHd_100 : 44.799 27.499 12.878 9.368 MuHd_105 : 37.374 26.030 11.855 8.577 Hmax_075 : -6.500 1.900 -4.577 1.120 Hmax_095 : 5.250 7.700 -1.205 3.500 Hmax_100 : 6.700 10.100 -0.860 3.740 Hmax_105 : 15.300 15.700 2.403 5.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5588 0.4412 DFMC : 0.7320 0.2680
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 878 PcyM_1463900 MFKHYQKAVKRIMNAKYENESFVSTGSDKNCDEENSALLQNKEASGMNKRKSKKSNNDNGKYKYYENFFNKKRNKKWNYF 80 MIFFLGICFGFAIWPFFMTIITYKLFYKDNFNSSNFNTSNSSASLKPYGNDRNKKGENEKVSLKDQSQKNSSPHFRPIRF 160 EEIAGIDESKLELLEVVDFIRNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAK 240 RIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLR 320 PGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDKIARLTPGFSGADLENVVNEATILATRNKKSVVTIGELFEA 400 RDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLA 480 VCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTISTIEVEVKALV 560 EKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKKIIDPNNTRDYSGKVPALSKDTKSDSTSSGPENDKREKNSTRG 640 EGRNTDENRTNVKRTGPSAPNDRHEEKQADTGTPAEELKSASSDNVLKKKGKRGEREKRRHTSTRDNDKIEIVRKDAKNV 720 AKKIKKKYAKDPNVKNKKILKVVNEHKPYDVDRKADGGNLQNKNGKTGLNGSNGSNGPNGPLGKLDKRSYPKGHSPHDDN 800 NNSVVKNMSEVFSKDFASPAEQNGDNESPDYVKAKEMTLNNFKEAVDTSHIKNVGEMKKFNIFEHNLGKLFLFDIFGS 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................................P........... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .............................................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1463900 3 ----MFK|HY 0.071 . PcyM_1463900 7 MFKHYQK|AV 0.081 . PcyM_1463900 10 HYQKAVK|RI 0.064 . PcyM_1463900 11 YQKAVKR|IM 0.176 . PcyM_1463900 16 KRIMNAK|YE 0.084 . PcyM_1463900 29 VSTGSDK|NC 0.063 . PcyM_1463900 42 SALLQNK|EA 0.075 . PcyM_1463900 49 EASGMNK|RK 0.069 . PcyM_1463900 50 ASGMNKR|KS 0.198 . PcyM_1463900 51 SGMNKRK|SK 0.146 . PcyM_1463900 53 MNKRKSK|KS 0.130 . PcyM_1463900 54 NKRKSKK|SN 0.253 . PcyM_1463900 61 SNNDNGK|YK 0.075 . PcyM_1463900 63 NDNGKYK|YY 0.088 . PcyM_1463900 71 YENFFNK|KR 0.065 . PcyM_1463900 72 ENFFNKK|RN 0.080 . PcyM_1463900 73 NFFNKKR|NK 0.167 . PcyM_1463900 75 FNKKRNK|KW 0.064 . PcyM_1463900 76 NKKRNKK|WN 0.269 . PcyM_1463900 104 MTIITYK|LF 0.063 . PcyM_1463900 108 TYKLFYK|DN 0.071 . PcyM_1463900 126 NSSASLK|PY 0.081 . PcyM_1463900 132 KPYGNDR|NK 0.083 . PcyM_1463900 134 YGNDRNK|KG 0.065 . PcyM_1463900 135 GNDRNKK|GE 0.296 . PcyM_1463900 140 KKGENEK|VS 0.059 . PcyM_1463900 144 NEKVSLK|DQ 0.077 . PcyM_1463900 149 LKDQSQK|NS 0.073 . PcyM_1463900 156 NSSPHFR|PI 0.176 . PcyM_1463900 159 PHFRPIR|FE 0.283 . PcyM_1463900 170 AGIDESK|LE 0.056 . PcyM_1463900 181 EVVDFIR|NR 0.095 . PcyM_1463900 183 VDFIRNR|EK 0.090 . PcyM_1463900 185 FIRNREK|YQ 0.080 . PcyM_1463900 192 YQEMGAR|MP 0.099 . PcyM_1463900 195 MGARMPK|GV 0.226 . PcyM_1463900 207 GPPGSGK|TM 0.056 . PcyM_1463900 212 GKTMLAR|AV 0.144 . PcyM_1463900 240 YVGQGAK|RI 0.065 . PcyM_1463900 241 VGQGAKR|IR 0.110 . PcyM_1463900 243 QGAKRIR|QL 0.122 . PcyM_1463900 250 QLFAHAR|SV 0.260 . PcyM_1463900 268 IDAIGGK|RS 0.064 . PcyM_1463900 269 DAIGGKR|SS 0.284 . PcyM_1463900 280 VNGAGQR|EH 0.097 . PcyM_1463900 310 VIGATNR|ID 0.065 . PcyM_1463900 320 LDSALLR|PG 0.076 . PcyM_1463900 323 ALLRPGR|FD 0.201 . PcyM_1463900 326 RPGRFDR|IV 0.496 . PcyM_1463900 338 LPDVNGR|KR 0.077 . PcyM_1463900 339 PDVNGRK|RI 0.069 . PcyM_1463900 340 DVNGRKR|IL 0.211 . PcyM_1463900 347 ILEIYIK|KI 0.060 . PcyM_1463900 348 LEIYIKK|IK 0.088 . PcyM_1463900 350 IYIKKIK|SD 0.084 . PcyM_1463900 354 KIKSDLK|AE 0.058 . PcyM_1463900 360 KAEDIDK|IA 0.060 . PcyM_1463900 363 DIDKIAR|LT 0.071 . PcyM_1463900 386 ATILATR|NK 0.070 . PcyM_1463900 388 ILATRNK|KS 0.061 . PcyM_1463900 389 LATRNKK|SV 0.630 *ProP* PcyM_1463900 401 GELFEAR|DK 0.097 . PcyM_1463900 403 LFEARDK|VS 0.056 . PcyM_1463900 410 VSMGPER|KS 0.080 . PcyM_1463900 411 SMGPERK|SL 0.185 . PcyM_1463900 414 PERKSLR|QS 0.140 . PcyM_1463900 420 RQSDHQR|RI 0.131 . PcyM_1463900 421 QSDHQRR|IT 0.172 . PcyM_1463900 440 AYFLQPK|TD 0.059 . PcyM_1463900 446 KTDPIHK|AT 0.066 . PcyM_1463900 452 KATIISR|GN 0.083 . PcyM_1463900 467 QIPVDDR|HN 0.077 . PcyM_1463900 472 DRHNYFK|SQ 0.101 . PcyM_1463900 478 KSQMEAK|LA 0.077 . PcyM_1463900 486 AVCMGGR|TA 0.105 . PcyM_1463900 495 EEIVFGK|SE 0.082 . PcyM_1463900 508 ASSDISR|AT 0.164 . PcyM_1463900 515 ATEIAYK|MV 0.076 . PcyM_1463900 525 EWGMSDK|LG 0.056 . PcyM_1463900 532 LGPLNYK|KR 0.056 . PcyM_1463900 533 GPLNYKK|RM 0.117 . PcyM_1463900 534 PLNYKKR|MG 0.228 . PcyM_1463900 543 DGYSSNR|LS 0.079 . PcyM_1463900 557 TIEVEVK|AL 0.073 . PcyM_1463900 562 VKALVEK|GK 0.075 . PcyM_1463900 564 ALVEKGK|SL 0.112 . PcyM_1463900 572 LSEEILR|RH 0.081 . PcyM_1463900 573 SEEILRR|HR 0.099 . PcyM_1463900 575 EILRRHR|KE 0.129 . PcyM_1463900 576 ILRRHRK|EL 0.351 . PcyM_1463900 588 AFALLDK|ET 0.062 . PcyM_1463900 597 LSGEEIK|KI 0.073 . PcyM_1463900 598 SGEEIKK|II 0.102 . PcyM_1463900 606 IDPNNTR|DY 0.117 . PcyM_1463900 611 TRDYSGK|VP 0.069 . PcyM_1463900 617 KVPALSK|DT 0.061 . PcyM_1463900 620 ALSKDTK|SD 0.102 . PcyM_1463900 632 SGPENDK|RE 0.056 . PcyM_1463900 633 GPENDKR|EK 0.162 . PcyM_1463900 635 ENDKREK|NS 0.065 . PcyM_1463900 639 REKNSTR|GE 0.118 . PcyM_1463900 643 STRGEGR|NT 0.127 . PcyM_1463900 649 RNTDENR|TN 0.078 . PcyM_1463900 653 ENRTNVK|RT 0.072 . PcyM_1463900 654 NRTNVKR|TG 0.139 . PcyM_1463900 663 PSAPNDR|HE 0.121 . PcyM_1463900 667 NDRHEEK|QA 0.109 . PcyM_1463900 679 TPAEELK|SA 0.102 . PcyM_1463900 688 SSDNVLK|KK 0.069 . PcyM_1463900 689 SDNVLKK|KG 0.150 . PcyM_1463900 690 DNVLKKK|GK 0.115 . PcyM_1463900 692 VLKKKGK|RG 0.068 . PcyM_1463900 693 LKKKGKR|GE 0.205 . PcyM_1463900 696 KGKRGER|EK 0.198 . PcyM_1463900 698 KRGEREK|RR 0.068 . PcyM_1463900 699 RGEREKR|RH 0.372 . PcyM_1463900 700 GEREKRR|HT 0.251 . PcyM_1463900 705 RRHTSTR|DN 0.363 . PcyM_1463900 709 STRDNDK|IE 0.060 . PcyM_1463900 714 DKIEIVR|KD 0.069 . PcyM_1463900 715 KIEIVRK|DA 0.115 . PcyM_1463900 718 IVRKDAK|NV 0.086 . PcyM_1463900 722 DAKNVAK|KI 0.073 . PcyM_1463900 723 AKNVAKK|IK 0.122 . PcyM_1463900 725 NVAKKIK|KK 0.079 . PcyM_1463900 726 VAKKIKK|KY 0.089 . PcyM_1463900 727 AKKIKKK|YA 0.140 . PcyM_1463900 730 IKKKYAK|DP 0.080 . PcyM_1463900 735 AKDPNVK|NK 0.054 . PcyM_1463900 737 DPNVKNK|KI 0.100 . PcyM_1463900 738 PNVKNKK|IL 0.103 . PcyM_1463900 741 KNKKILK|VV 0.072 . PcyM_1463900 747 KVVNEHK|PY 0.067 . PcyM_1463900 753 KPYDVDR|KA 0.191 . PcyM_1463900 754 PYDVDRK|AD 0.095 . PcyM_1463900 763 GGNLQNK|NG 0.079 . PcyM_1463900 766 LQNKNGK|TG 0.065 . PcyM_1463900 784 PNGPLGK|LD 0.059 . PcyM_1463900 787 PLGKLDK|RS 0.071 . PcyM_1463900 788 LGKLDKR|SY 0.244 . PcyM_1463900 792 DKRSYPK|GH 0.073 . PcyM_1463900 806 NNNSVVK|NM 0.071 . PcyM_1463900 814 MSEVFSK|DF 0.069 . PcyM_1463900 833 ESPDYVK|AK 0.066 . PcyM_1463900 835 PDYVKAK|EM 0.071 . PcyM_1463900 843 MTLNNFK|EA 0.058 . PcyM_1463900 852 VDTSHIK|NV 0.078 . PcyM_1463900 858 KNVGEMK|KF 0.072 . PcyM_1463900 859 NVGEMKK|FN 0.097 . PcyM_1463900 869 FEHNLGK|LF 0.059 . ____________________________^_________________
  • Fasta :-

    >PcyM_1463900 ATGTTTAAGCATTACCAAAAAGCGGTGAAGAGAATTATGAATGCCAAGTATGAAAATGAA AGCTTCGTGTCAACAGGGTCAGATAAAAACTGCGATGAGGAAAATTCAGCGTTGTTACAG AACAAAGAGGCGTCAGGAATGAACAAAAGGAAATCAAAAAAATCAAACAATGATAATGGG AAGTACAAATATTACGAAAACTTCTTTAACAAAAAGAGAAATAAAAAATGGAATTATTTT ATGATATTTTTTCTGGGCATATGTTTTGGCTTTGCCATTTGGCCCTTCTTCATGACCATA ATAACGTATAAATTATTTTACAAAGACAATTTTAACAGCTCCAATTTTAACACCAGCAAC AGTTCAGCATCATTGAAGCCCTATGGAAATGACAGAAATAAAAAAGGTGAAAATGAAAAG GTATCCTTAAAAGATCAGTCCCAGAAAAATTCCTCTCCCCATTTTAGGCCAATCCGATTT GAAGAAATCGCTGGAATTGATGAATCAAAGTTGGAACTCCTCGAAGTTGTTGACTTTATA AGGAATAGAGAAAAGTACCAAGAAATGGGCGCAAGGATGCCTAAGGGGGTTCTTCTGGTT GGTCCTCCAGGGTCAGGAAAAACCATGCTAGCTAGGGCAGTAGCCACAGAAGCAAATGTC CCATATATTTATACGTCCGGGCCAGAGTTCATCGAGATATATGTAGGCCAAGGGGCAAAA AGAATAAGACAATTATTTGCACACGCAAGGTCGGTTGCTCCATCGATCGTTTTTATTGAC GAAATTGATGCCATAGGAGGGAAAAGAAGTTCCGGTTCTGTCAATGGTGCTGGTCAGAGA GAACATGATCAAACTCTTAACCAGTTGTTAGTCGAAATGGATGGTTTTAGCAACACCGTC CATATTATGGTAATAGGTGCAACCAATCGAATTGATACTCTAGATAGTGCCTTACTTCGT CCTGGGAGATTCGATCGAATTGTTTATGTCCCCCTACCTGATGTTAATGGAAGGAAAAGG ATCCTAGAAATTTATATCAAAAAAATTAAAAGTGATTTAAAAGCAGAAGATATTGATAAA ATAGCTAGATTGACTCCTGGTTTTTCAGGTGCTGACTTAGAAAATGTGGTAAATGAAGCA ACCATCCTAGCCACTAGAAATAAAAAAAGTGTAGTCACCATTGGGGAGCTCTTCGAAGCT AGAGATAAAGTTTCCATGGGTCCAGAGAGAAAATCTCTAAGACAGTCTGATCATCAGAGA AGAATTACTGCTTATCACGAAGCGGGACATGCCATCGTGGCGTACTTTCTTCAACCCAAA ACGGACCCAATACATAAGGCTACCATTATCTCAAGAGGCAATGCCCTTGGATACGTAGAA CAAATACCAGTAGATGATAGACACAACTATTTTAAAAGCCAAATGGAAGCAAAATTGGCT GTCTGTATGGGTGGAAGAACTGCAGAAGAAATCGTTTTTGGAAAATCTGAAACGAGTAGT GGTGCTTCTAGTGATATTTCTAGAGCTACCGAAATTGCTTACAAAATGGTAACGGAGTGG GGAATGTCAGACAAGTTGGGCCCACTGAATTATAAGAAAAGAATGGGAGATGGATACTCA TCAAATCGATTATCAGCTCAAACTATTTCTACCATTGAAGTAGAGGTGAAGGCGCTGGTA GAGAAGGGCAAAAGCTTATCCGAAGAAATCCTAAGAAGGCACAGAAAGGAACTTGACAAT TTAGCCTTTGCACTACTCGATAAAGAAACCTTATCCGGAGAGGAAATAAAAAAGATTATT GACCCAAACAACACGAGGGATTACTCCGGCAAAGTGCCTGCTCTAAGTAAGGACACCAAA TCGGACAGCACTTCAAGCGGCCCAGAAAATGACAAACGGGAAAAAAATTCCACACGTGGG GAAGGAAGAAACACAGATGAGAACCGCACAAATGTGAAACGGACGGGTCCAAGCGCACCA AATGACCGACACGAAGAAAAGCAGGCCGATACAGGAACCCCCGCGGAAGAACTCAAAAGT GCTAGCAGTGATAATGTGCTCAAAAAAAAGGGCAAACGAGGTGAACGGGAGAAGCGCAGG CATACATCCACCAGAGACAATGACAAAATCGAAATTGTGAGGAAAGACGCCAAAAATGTT GCCAAAAAGATAAAGAAGAAATATGCCAAAGACCCCAATGTTAAGAATAAAAAAATACTG AAAGTTGTGAATGAGCATAAACCGTACGACGTTGATAGGAAGGCGGATGGGGGAAATTTA CAAAATAAAAATGGCAAAACGGGATTAAATGGCTCAAATGGCTCAAATGGCCCAAATGGC CCACTGGGAAAACTGGATAAACGCAGTTACCCGAAGGGACACTCGCCCCACGACGACAAT AACAACAGCGTGGTAAAAAATATGAGCGAAGTGTTTAGCAAAGATTTTGCTTCCCCCGCC GAACAAAACGGCGATAACGAAAGCCCCGATTATGTAAAAGCGAAAGAAATGACCCTTAAC AATTTCAAGGAAGCCGTGGACACGTCGCACATAAAGAACGTCGGCGAAATGAAGAAGTTC AACATTTTTGAGCACAACTTGGGTAAACTCTTCCTCTTTGACATTTTTGGTAGCTAG
  • Download Fasta
  • Fasta :-

    MFKHYQKAVKRIMNAKYENESFVSTGSDKNCDEENSALLQNKEASGMNKRKSKKSNNDNG KYKYYENFFNKKRNKKWNYFMIFFLGICFGFAIWPFFMTIITYKLFYKDNFNSSNFNTSN SSASLKPYGNDRNKKGENEKVSLKDQSQKNSSPHFRPIRFEEIAGIDESKLELLEVVDFI RNREKYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAK RIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTV HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVNGRKRILEIYIKKIKSDLKAEDIDK IARLTPGFSGADLENVVNEATILATRNKKSVVTIGELFEARDKVSMGPERKSLRQSDHQR RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLA VCMGGRTAEEIVFGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYS SNRLSAQTISTIEVEVKALVEKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKKII DPNNTRDYSGKVPALSKDTKSDSTSSGPENDKREKNSTRGEGRNTDENRTNVKRTGPSAP NDRHEEKQADTGTPAEELKSASSDNVLKKKGKRGEREKRRHTSTRDNDKIEIVRKDAKNV AKKIKKKYAKDPNVKNKKILKVVNEHKPYDVDRKADGGNLQNKNGKTGLNGSNGSNGPNG PLGKLDKRSYPKGHSPHDDNNNSVVKNMSEVFSKDFASPAEQNGDNESPDYVKAKEMTLN NFKEAVDTSHIKNVGEMKKFNIFEHNLGKLFLFDIFGS

  • title: ATP binding site
  • coordinates: P202,P203,G204,S205,G206,K207,T208,M209,D260,N309
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1463900142 SNEKVSLKDQ0.998unspPcyM_1463900142 SNEKVSLKDQ0.998unspPcyM_1463900142 SNEKVSLKDQ0.998unspPcyM_1463900147 SLKDQSQKNS0.994unspPcyM_1463900412 SPERKSLRQS0.997unspPcyM_1463900592 SKETLSGEEI0.997unspPcyM_1463900623 STKSDSTSSG0.994unspPcyM_1463900626 SDSTSSGPEN0.994unspPcyM_1463900703 SRRHTSTRDN0.998unspPcyM_1463900795 SPKGHSPHDD0.996unspPcyM_146390052 SNKRKSKKSN0.998unspPcyM_146390055 SKSKKSNNDN0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India