PcyM_1464200 | 3-hydroxyisobutyryl-coenzyme A hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1464200OTHER0.7965780.0002200.203202
No Results

  • Fasta :-

    >PcyM_1464200 MQKLGLRLHLGEAHCGRRGFHHYVVKPEKGGSLFCIIPHFCTRHFSAKKGNPQRELNSAP FAEGRQTSSFFSKASYNCSVDGKGRNEIFFEKMEKKNSKTFHLTKQSVSSEKAASRDSAK GGQVDEAENERNAGNAKNAKNAKNAKNAEEEALLKDGDENKMGSRKGENQNCDPLSPVID LELSEVWSKKTLILNFKNSVFEIILNRPEKLNAINKDMINGLFNIVKSLNNDDRCHIIVI KSSNTTCFCSGSDVKGIVQNKEKGMQHLKQLYMYIHYLGKMKKPVLCIWNGYTMGGGLGI SMYAKFRIINKKAIFAMPENKIGFFPDVTCCYFFNKYFGRNIGLHLGLTSLRLNEVDLVN YKICTNYIEDVDALLNEIYNIGKKANQNEFDAELASVLDKYPPKVTTDTEPVLTQKLINN INKYYSLATSLDDLVSRLNKDQDNNPFCQETLEAINQNCYSSCNLWFEYFLYSYDKPLEE VLDNDFKITQHFLYHTDTFEKGVTELLVKKNKSFKWSSAREYGDVHAGPSVEDILTNSGV LSIRGEFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1464200.fa Sequence name : PcyM_1464200 Sequence length : 548 VALUES OF COMPUTED PARAMETERS Coef20 : 3.596 CoefTot : -3.784 ChDiff : 7 ZoneTo : 54 KR : 10 DE : 2 CleavSite : 53 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 0.941 0.188 0.576 MesoH : -0.305 0.355 -0.315 0.258 MuHd_075 : 48.312 29.476 14.633 9.738 MuHd_095 : 37.300 17.689 12.421 8.144 MuHd_100 : 32.744 17.006 10.012 7.472 MuHd_105 : 29.179 15.079 9.700 6.832 Hmax_075 : 15.167 11.317 1.467 5.425 Hmax_095 : 9.100 12.075 2.272 3.859 Hmax_100 : 12.100 12.800 0.898 3.190 Hmax_105 : 13.767 14.400 3.963 5.343 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1619 0.8381 DFMC : 0.1981 0.8019 This protein is probably imported in mitochondria. f(Ser) = 0.0370 f(Arg) = 0.0926 CMi = 0.18553 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 548 PcyM_1464200 MQKLGLRLHLGEAHCGRRGFHHYVVKPEKGGSLFCIIPHFCTRHFSAKKGNPQRELNSAPFAEGRQTSSFFSKASYNCSV 80 DGKGRNEIFFEKMEKKNSKTFHLTKQSVSSEKAASRDSAKGGQVDEAENERNAGNAKNAKNAKNAKNAEEEALLKDGDEN 160 KMGSRKGENQNCDPLSPVIDLELSEVWSKKTLILNFKNSVFEIILNRPEKLNAINKDMINGLFNIVKSLNNDDRCHIIVI 240 KSSNTTCFCSGSDVKGIVQNKEKGMQHLKQLYMYIHYLGKMKKPVLCIWNGYTMGGGLGISMYAKFRIINKKAIFAMPEN 320 KIGFFPDVTCCYFFNKYFGRNIGLHLGLTSLRLNEVDLVNYKICTNYIEDVDALLNEIYNIGKKANQNEFDAELASVLDK 400 YPPKVTTDTEPVLTQKLINNINKYYSLATSLDDLVSRLNKDQDNNPFCQETLEAINQNCYSSCNLWFEYFLYSYDKPLEE 480 VLDNDFKITQHFLYHTDTFEKGVTELLVKKNKSFKWSSAREYGDVHAGPSVEDILTNSGVLSIRGEFT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1464200 3 ----MQK|LG 0.054 . PcyM_1464200 7 MQKLGLR|LH 0.065 . PcyM_1464200 17 GEAHCGR|RG 0.085 . PcyM_1464200 18 EAHCGRR|GF 0.170 . PcyM_1464200 26 FHHYVVK|PE 0.062 . PcyM_1464200 29 YVVKPEK|GG 0.059 . PcyM_1464200 43 IPHFCTR|HF 0.132 . PcyM_1464200 48 TRHFSAK|KG 0.099 . PcyM_1464200 49 RHFSAKK|GN 0.098 . PcyM_1464200 54 KKGNPQR|EL 0.107 . PcyM_1464200 65 APFAEGR|QT 0.103 . PcyM_1464200 73 TSSFFSK|AS 0.083 . PcyM_1464200 83 NCSVDGK|GR 0.077 . PcyM_1464200 85 SVDGKGR|NE 0.093 . PcyM_1464200 92 NEIFFEK|ME 0.060 . PcyM_1464200 95 FFEKMEK|KN 0.065 . PcyM_1464200 96 FEKMEKK|NS 0.091 . PcyM_1464200 99 MEKKNSK|TF 0.066 . PcyM_1464200 105 KTFHLTK|QS 0.067 . PcyM_1464200 112 QSVSSEK|AA 0.069 . PcyM_1464200 116 SEKAASR|DS 0.124 . PcyM_1464200 120 ASRDSAK|GG 0.075 . PcyM_1464200 131 DEAENER|NA 0.108 . PcyM_1464200 137 RNAGNAK|NA 0.078 . PcyM_1464200 140 GNAKNAK|NA 0.087 . PcyM_1464200 143 KNAKNAK|NA 0.096 . PcyM_1464200 146 KNAKNAK|NA 0.095 . PcyM_1464200 155 EEEALLK|DG 0.064 . PcyM_1464200 161 KDGDENK|MG 0.070 . PcyM_1464200 165 ENKMGSR|KG 0.080 . PcyM_1464200 166 NKMGSRK|GE 0.093 . PcyM_1464200 189 LSEVWSK|KT 0.056 . PcyM_1464200 190 SEVWSKK|TL 0.109 . PcyM_1464200 197 TLILNFK|NS 0.056 . PcyM_1464200 207 FEIILNR|PE 0.061 . PcyM_1464200 210 ILNRPEK|LN 0.141 . PcyM_1464200 216 KLNAINK|DM 0.087 . PcyM_1464200 227 GLFNIVK|SL 0.081 . PcyM_1464200 234 SLNNDDR|CH 0.118 . PcyM_1464200 241 CHIIVIK|SS 0.073 . PcyM_1464200 255 CSGSDVK|GI 0.065 . PcyM_1464200 261 KGIVQNK|EK 0.069 . PcyM_1464200 263 IVQNKEK|GM 0.065 . PcyM_1464200 269 KGMQHLK|QL 0.072 . PcyM_1464200 280 YIHYLGK|MK 0.069 . PcyM_1464200 282 HYLGKMK|KP 0.056 . PcyM_1464200 283 YLGKMKK|PV 0.140 . PcyM_1464200 305 GISMYAK|FR 0.076 . PcyM_1464200 307 SMYAKFR|II 0.104 . PcyM_1464200 311 KFRIINK|KA 0.067 . PcyM_1464200 312 FRIINKK|AI 0.150 . PcyM_1464200 321 FAMPENK|IG 0.056 . PcyM_1464200 336 CCYFFNK|YF 0.080 . PcyM_1464200 340 FNKYFGR|NI 0.125 . PcyM_1464200 352 LGLTSLR|LN 0.077 . PcyM_1464200 362 VDLVNYK|IC 0.057 . PcyM_1464200 383 EIYNIGK|KA 0.072 . PcyM_1464200 384 IYNIGKK|AN 0.096 . PcyM_1464200 400 LASVLDK|YP 0.076 . PcyM_1464200 404 LDKYPPK|VT 0.074 . PcyM_1464200 416 EPVLTQK|LI 0.064 . PcyM_1464200 423 LINNINK|YY 0.075 . PcyM_1464200 437 LDDLVSR|LN 0.083 . PcyM_1464200 440 LVSRLNK|DQ 0.201 . PcyM_1464200 476 FLYSYDK|PL 0.074 . PcyM_1464200 487 VLDNDFK|IT 0.063 . PcyM_1464200 501 HTDTFEK|GV 0.076 . PcyM_1464200 509 VTELLVK|KN 0.053 . PcyM_1464200 510 TELLVKK|NK 0.086 . PcyM_1464200 512 LLVKKNK|SF 0.081 . PcyM_1464200 515 KKNKSFK|WS 0.096 . PcyM_1464200 520 FKWSSAR|EY 0.153 . PcyM_1464200 544 SGVLSIR|GE 0.092 . ____________________________^_________________

  • Fasta :-

    >PcyM_1464200 ATGCAAAAATTAGGCTTGCGACTCCATCTGGGAGAGGCCCATTGCGGAAGACGGGGCTTT CACCATTATGTAGTCAAGCCTGAGAAGGGTGGCTCTCTTTTCTGTATTATTCCCCATTTT TGTACACGCCATTTTTCTGCCAAAAAAGGCAACCCACAGAGGGAATTGAACAGCGCTCCT TTCGCAGAAGGGAGACAAACCAGCAGCTTCTTCAGCAAAGCGAGTTACAACTGTTCTGTC GATGGAAAAGGAAGAAATGAAATATTTTTTGAAAAAATGGAAAAAAAAAATAGCAAGACG TTCCATTTGACGAAGCAAAGTGTGTCCAGTGAAAAAGCAGCCTCACGGGATTCTGCAAAA GGGGGGCAAGTGGACGAAGCGGAAAATGAGAGAAACGCGGGAAACGCGAAAAACGCGAAA AATGCGAAGAACGCGAAAAACGCGGAAGAGGAGGCACTCCTCAAGGATGGGGATGAAAAC AAAATGGGCAGTCGAAAGGGGGAAAACCAAAATTGTGACCCCCTCTCCCCAGTCATAGAC CTAGAACTGTCCGAAGTGTGGTCCAAAAAAACGCTCATTCTAAATTTCAAAAATAGCGTA TTCGAAATAATTTTAAACAGACCAGAAAAGCTAAACGCAATTAACAAAGACATGATTAAT GGATTATTCAATATTGTGAAAAGCCTAAACAACGATGATAGGTGTCACATAATTGTAATT AAAAGCAGCAACACGACGTGCTTCTGCTCAGGTTCTGATGTCAAGGGCATTGTCCAAAAT AAAGAAAAGGGGATGCAGCATTTGAAGCAACTATACATGTACATTCACTACTTAGGCAAA ATGAAAAAACCCGTCTTGTGCATATGGAATGGGTATACTATGGGAGGAGGGTTAGGGATT TCTATGTATGCAAAATTTAGGATAATAAATAAAAAGGCCATATTTGCCATGCCGGAAAAT AAAATTGGCTTTTTCCCCGATGTCACTTGCTGCTACTTTTTTAACAAATATTTTGGAAGG AACATTGGTCTCCATCTAGGGTTGACTTCCCTACGATTAAACGAAGTCGATTTGGTTAAC TATAAAATTTGCACCAACTATATCGAAGACGTCGATGCACTCCTGAACGAAATTTACAAC ATTGGGAAGAAGGCAAACCAGAATGAGTTCGATGCGGAACTCGCCAGCGTTTTAGATAAG TACCCGCCCAAAGTAACTACAGACACGGAACCGGTACTTACGCAAAAGTTGATTAACAAC ATTAACAAGTACTACAGTTTGGCTACTAGTCTAGACGATCTTGTTAGCAGGTTGAATAAG GATCAGGATAATAACCCCTTTTGTCAAGAAACCCTTGAGGCTATAAACCAGAACTGCTAC TCCAGTTGTAACTTATGGTTTGAATATTTCCTTTACAGTTACGATAAACCGTTGGAGGAG GTGCTAGACAACGATTTTAAAATTACGCAGCATTTTTTGTATCACACTGATACGTTTGAG AAGGGAGTAACTGAGCTGCTTGTGAAGAAAAATAAATCTTTCAAGTGGAGCTCCGCGCGG GAATATGGCGATGTGCACGCGGGGCCAAGCGTTGAAGACATTCTAACAAACAGCGGGGTG CTGTCCATCCGGGGGGAATTCACATGA
  • Download Fasta

  • Fasta :-

    MQKLGLRLHLGEAHCGRRGFHHYVVKPEKGGSLFCIIPHFCTRHFSAKKGNPQRELNSAP FAEGRQTSSFFSKASYNCSVDGKGRNEIFFEKMEKKNSKTFHLTKQSVSSEKAASRDSAK GGQVDEAENERNAGNAKNAKNAKNAKNAEEEALLKDGDENKMGSRKGENQNCDPLSPVID LELSEVWSKKTLILNFKNSVFEIILNRPEKLNAINKDMINGLFNIVKSLNNDDRCHIIVI KSSNTTCFCSGSDVKGIVQNKEKGMQHLKQLYMYIHYLGKMKKPVLCIWNGYTMGGGLGI SMYAKFRIINKKAIFAMPENKIGFFPDVTCCYFFNKYFGRNIGLHLGLTSLRLNEVDLVN YKICTNYIEDVDALLNEIYNIGKKANQNEFDAELASVLDKYPPKVTTDTEPVLTQKLINN INKYYSLATSLDDLVSRLNKDQDNNPFCQETLEAINQNCYSSCNLWFEYFLYSYDKPLEE VLDNDFKITQHFLYHTDTFEKGVTELLVKKNKSFKWSSAREYGDVHAGPSVEDILTNSGV LSIRGEFT

  • title: substrate binding site
  • coordinates: L211,A213,T245,S250,G251,S252,D253,V254,Y292,M294,G295,G296,P318,E319,I322
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1464200118 SASRDSAKGG0.997unspPcyM_1464200118 SASRDSAKGG0.997unspPcyM_1464200118 SASRDSAKGG0.997unspPcyM_1464200513 SKKNKSFKWS0.991unspPcyM_1464200530 SHAGPSVEDI0.993unspPcyM_1464200109 SKQSVSSEKA0.994unspPcyM_1464200110 SQSVSSEKAA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India