SPAC12B10.05 | mitochondrial intermediate cleavage peptidase Icp55 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC12B10.05OTHER0.5746880.0000870.425225
No Results

  • Fasta :-

    >SPAC12B10.05 MSGYIRTLFIRNRFSNYRLRSQIIKYKYSNVSYLNKSALRCGQATDSTHPHILQPGELTP RISAQEYKTRRDRVASLLEDNDFMIVTSAPVRHMCGAAFYEYHQDPNFYYLTGCLEPNAV LLMFKNGASGSYDCSLYLPSKNPYIEKWEGLRTGSTLGKKLFQIENVYDSSLASSVINAL GKKSNRIFYNYQTGYLSKMPAASAPEFIQDTLTKLFRTSTQRSVDELLHPLRSIKSTAEL ECMKEAANISSNVYREIMRKRFEKEAEMSAEFNYRFCIGGCDRSAYVPVVAGGKNGLTIH YTINNDIFRPDEMVLVDAGGEFGGYVTDISRTWPINGKFSTVQRDLYQAVLNVQKKCIKY CCTSNGWSLADIHFESVKLMHEELKQVGIHGTKREITDILYPHSIGHEIGLEIHDCSTNN GYQPLRKNQVITIEPGLYVPEEDGWPQWAQGIAIRIEDSVIVGDDKPFVLTSAAPKEIEE IEALKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/179 Sequence name : 179 Sequence length : 486 VALUES OF COMPUTED PARAMETERS Coef20 : 4.975 CoefTot : -0.218 ChDiff : 1 ZoneTo : 45 KR : 9 DE : 0 CleavSite : 20 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.976 1.118 0.128 0.529 MesoH : -0.559 0.048 -0.385 0.182 MuHd_075 : 35.176 30.027 10.222 8.363 MuHd_095 : 24.050 21.077 7.156 7.124 MuHd_100 : 27.032 21.402 8.338 7.075 MuHd_105 : 28.594 19.758 9.085 6.621 Hmax_075 : 11.025 8.050 2.244 7.520 Hmax_095 : 2.100 13.300 1.506 3.885 Hmax_100 : 6.400 11.400 1.506 3.520 Hmax_105 : 12.400 7.525 3.482 3.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0077 0.9923 DFMC : 0.0231 0.9769 This protein is probably imported in mitochondria. f(Ser) = 0.1333 f(Arg) = 0.1333 CMi = 0.51948 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 486 SPAC12B10.05 MSGYIRTLFIRNRFSNYRLRSQIIKYKYSNVSYLNKSALRCGQATDSTHPHILQPGELTPRISAQEYKTRRDRVASLLED 80 NDFMIVTSAPVRHMCGAAFYEYHQDPNFYYLTGCLEPNAVLLMFKNGASGSYDCSLYLPSKNPYIEKWEGLRTGSTLGKK 160 LFQIENVYDSSLASSVINALGKKSNRIFYNYQTGYLSKMPAASAPEFIQDTLTKLFRTSTQRSVDELLHPLRSIKSTAEL 240 ECMKEAANISSNVYREIMRKRFEKEAEMSAEFNYRFCIGGCDRSAYVPVVAGGKNGLTIHYTINNDIFRPDEMVLVDAGG 320 EFGGYVTDISRTWPINGKFSTVQRDLYQAVLNVQKKCIKYCCTSNGWSLADIHFESVKLMHEELKQVGIHGTKREITDIL 400 YPHSIGHEIGLEIHDCSTNNGYQPLRKNQVITIEPGLYVPEEDGWPQWAQGIAIRIEDSVIVGDDKPFVLTSAAPKEIEE 480 IEALKK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC12B10.05 6 -MSGYIR|TL 0.085 . SPAC12B10.05 11 IRTLFIR|NR 0.078 . SPAC12B10.05 13 TLFIRNR|FS 0.107 . SPAC12B10.05 18 NRFSNYR|LR 0.104 . SPAC12B10.05 20 FSNYRLR|SQ 0.130 . SPAC12B10.05 25 LRSQIIK|YK 0.078 . SPAC12B10.05 27 SQIIKYK|YS 0.072 . SPAC12B10.05 36 NVSYLNK|SA 0.095 . SPAC12B10.05 40 LNKSALR|CG 0.079 . SPAC12B10.05 61 PGELTPR|IS 0.079 . SPAC12B10.05 68 ISAQEYK|TR 0.067 . SPAC12B10.05 70 AQEYKTR|RD 0.081 . SPAC12B10.05 71 QEYKTRR|DR 0.165 . SPAC12B10.05 73 YKTRRDR|VA 0.258 . SPAC12B10.05 92 VTSAPVR|HM 0.101 . SPAC12B10.05 125 AVLLMFK|NG 0.054 . SPAC12B10.05 141 SLYLPSK|NP 0.059 . SPAC12B10.05 147 KNPYIEK|WE 0.064 . SPAC12B10.05 152 EKWEGLR|TG 0.074 . SPAC12B10.05 159 TGSTLGK|KL 0.093 . SPAC12B10.05 160 GSTLGKK|LF 0.072 . SPAC12B10.05 182 VINALGK|KS 0.067 . SPAC12B10.05 183 INALGKK|SN 0.123 . SPAC12B10.05 186 LGKKSNR|IF 0.095 . SPAC12B10.05 198 QTGYLSK|MP 0.064 . SPAC12B10.05 214 IQDTLTK|LF 0.061 . SPAC12B10.05 217 TLTKLFR|TS 0.080 . SPAC12B10.05 222 FRTSTQR|SV 0.239 . SPAC12B10.05 232 ELLHPLR|SI 0.097 . SPAC12B10.05 235 HPLRSIK|ST 0.261 . SPAC12B10.05 244 AELECMK|EA 0.060 . SPAC12B10.05 255 ISSNVYR|EI 0.198 . SPAC12B10.05 259 VYREIMR|KR 0.085 . SPAC12B10.05 260 YREIMRK|RF 0.093 . SPAC12B10.05 261 REIMRKR|FE 0.283 . SPAC12B10.05 264 MRKRFEK|EA 0.287 . SPAC12B10.05 275 SAEFNYR|FC 0.123 . SPAC12B10.05 283 CIGGCDR|SA 0.115 . SPAC12B10.05 294 PVVAGGK|NG 0.054 . SPAC12B10.05 309 INNDIFR|PD 0.120 . SPAC12B10.05 331 YVTDISR|TW 0.067 . SPAC12B10.05 338 TWPINGK|FS 0.069 . SPAC12B10.05 344 KFSTVQR|DL 0.174 . SPAC12B10.05 355 AVLNVQK|KC 0.057 . SPAC12B10.05 356 VLNVQKK|CI 0.122 . SPAC12B10.05 359 VQKKCIK|YC 0.070 . SPAC12B10.05 378 IHFESVK|LM 0.069 . SPAC12B10.05 385 LMHEELK|QV 0.098 . SPAC12B10.05 393 VGIHGTK|RE 0.054 . SPAC12B10.05 394 GIHGTKR|EI 0.278 . SPAC12B10.05 426 NGYQPLR|KN 0.077 . SPAC12B10.05 427 GYQPLRK|NQ 0.068 . SPAC12B10.05 455 AQGIAIR|IE 0.090 . SPAC12B10.05 466 VIVGDDK|PF 0.052 . SPAC12B10.05 476 LTSAAPK|EI 0.090 . SPAC12B10.05 485 EEIEALK|K- 0.058 . SPAC12B10.05 486 EIEALKK|-- 0.092 . ____________________________^_________________

  • Fasta :-

    >SPAC12B10.05 TTACTCTACTACATTATTATCTAGATTTCCAATTGATGCTTATTATAATTGCTTATACTA TCCTTGCAATTACCACGCTATGAGCGGTTATATCCGGACTCTCTTTATTCGTAACAGATT CTCAAATTATCGGCTTCGTAGTCAAATTATTAAATATAAATACTCCAATGTTTCATATCT AAATAAAAGCGCTTTAAGATGTGGACAAGCTACTGATTCGACTCATCCACACATTTTACA ACCTGGTGAATTAACTCCTCGGATATCTGCGCAAGAATATAAAACTAGGAGAGATCGAGT CGCTTCTCTCTTAGAAGACAATGACTTTATGATCGTTACGTCTGCTCCAGTAAGACATAT GTGTGGTGCAGCTTTCTATGAATACCACCAGGATCCAAATTTTTATTATTTAACTGGTTG CTTGGAACCAAATGCTGTACTATTAATGTTTAAAAATGGAGCAAGTGGAAGTTATGACTG TTCTCTTTATCTCCCATCGAAGAATCCATACATAGAGAAATGGGAAGGACTTCGAACAGG TTCAACACTTGGGAAAAAATTATTTCAAATAGAAAATGTTTATGATTCTAGTCTAGCTTC CTCGGTTATAAACGCTCTAGGAAAAAAGTCGAATAGGATTTTTTATAATTACCAAACCGG ATACCTCTCAAAAATGCCAGCTGCATCCGCTCCTGAATTCATACAAGATACGCTTACTAA ACTCTTTAGAACCTCAACCCAAAGGTCGGTAGATGAACTTCTTCATCCGCTTAGGAGCAT TAAAAGTACGGCTGAATTGGAGTGCATGAAAGAAGCAGCCAATATAAGTTCAAATGTTTA CAGGGAAATTATGCGGAAAAGATTTGAGAAAGAAGCTGAAATGTCCGCGGAATTCAATTA TCGGTTTTGTATTGGAGGCTGTGATAGATCCGCATATGTGCCTGTAGTAGCAGGTGGAAA AAATGGCTTGACTATCCATTACACAATTAATAATGATATATTCCGTCCTGACGAAATGGT TTTGGTAGACGCTGGCGGTGAATTCGGTGGTTATGTAACAGATATCTCGAGGACTTGGCC CATCAACGGCAAATTTAGTACTGTACAAAGGGATTTATATCAAGCAGTTCTGAATGTGCA AAAGAAATGTATTAAGTATTGTTGCACCAGTAATGGCTGGAGCTTGGCTGATATTCACTT TGAAAGTGTTAAATTAATGCATGAAGAATTGAAGCAGGTCGGCATTCATGGAACTAAACG GGAGATTACAGATATATTGTATCCGCATTCAATTGGGCATGAGATTGGACTAGAGATTCA CGATTGTTCTACGAATAATGGTTACCAACCGTTGCGCAAAAACCAAGTTATTACCATAGA ACCCGGACTATATGTTCCAGAAGAAGACGGATGGCCTCAATGGGCTCAAGGAATAGCTAT TCGAATTGAAGATAGCGTAATCGTTGGTGATGACAAGCCGTTCGTATTAACTAGTGCTGC TCCAAAAGAAATTGAAGAAATTGAAGCTTTGAAAAAGTAGAGATTGTGTTACCTATTGAC TAAGAATTAGGACTACATCTGACTATCGTAGAATAAAAGACATTATTTTTGGACTAAGTT TCTTAGAAGTAAGATTGAAGGGAAAAAAATCTATATATACTGTTAAATTTTAATCATTAC ACGAATTTTTTTTTAATATTTTATTGAAAAGTCAACGT
  • Download Fasta

  • Fasta :-

    MSGYIRTLFIRNRFSNYRLRSQIIKYKYSNVSYLNKSALRCGQATDSTHPHILQPGELTP RISAQEYKTRRDRVASLLEDNDFMIVTSAPVRHMCGAAFYEYHQDPNFYYLTGCLEPNAV LLMFKNGASGSYDCSLYLPSKNPYIEKWEGLRTGSTLGKKLFQIENVYDSSLASSVINAL GKKSNRIFYNYQTGYLSKMPAASAPEFIQDTLTKLFRTSTQRSVDELLHPLRSIKSTAEL ECMKEAANISSNVYREIMRKRFEKEAEMSAEFNYRFCIGGCDRSAYVPVVAGGKNGLTIH YTINNDIFRPDEMVLVDAGGEFGGYVTDISRTWPINGKFSTVQRDLYQAVLNVQKKCIKY CCTSNGWSLADIHFESVKLMHEELKQVGIHGTKREITDILYPHSIGHEIGLEIHDCSTNN GYQPLRKNQVITIEPGLYVPEEDGWPQWAQGIAIRIEDSVIVGDDKPFVLTSAAPKEIEE IEALKK

  • title: active site
  • coordinates: H300,D317,D328,H407,E434,E457
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC12B10.05219 SLFRTSTQRS0.992unspSPAC12B10.05219 SLFRTSTQRS0.992unspSPAC12B10.05219 SLFRTSTQRS0.992unspSPAC12B10.05223 SSTQRSVDEL0.995unspSPAC12B10.0515 SRNRFSNYRL0.992unspSPAC12B10.0559 TPGELTPRIS0.99unsp

SPAC12B10.05      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India