SPAC1687.02 | CAAX prenyl protease (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC1687.02OTHER0.7251770.2695280.005296
No Results

  • Fasta :-

    >SPAC1687.02 MRVYLISFFFTAIYVVSLYTFPVARPRPSLNRNDPKVITARCISVLLASSVCCILTRLII GPSLNVFTFPTDQVLKSLLHAATIFIGPLYEVWIVDKEYRLFFIHLKDCLSNAIAWRNII IGPLSEELTFRCCIVPICEAAGWSRLKIIFVAPLLFGMAHIHHTYEFLLAYPNAYIAAAL QTVVQFSYTTVFGWYTTHLFLSTHSLFPSFLVHAFCNSMGLPTLYGKIGNRNQTRIYYTL LLLGVLIFYMTWGITDFNNHQDFEPRLVPLN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/369 Sequence name : 369 Sequence length : 271 VALUES OF COMPUTED PARAMETERS Coef20 : 4.872 CoefTot : -0.381 ChDiff : 6 ZoneTo : 90 KR : 8 DE : 2 CleavSite : 51 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.159 2.159 0.492 0.790 MesoH : 1.017 1.033 -0.060 0.483 MuHd_075 : 39.509 21.060 9.756 8.848 MuHd_095 : 34.824 28.219 11.586 8.212 MuHd_100 : 32.060 27.762 10.552 7.325 MuHd_105 : 27.531 23.618 8.335 6.003 Hmax_075 : 6.400 26.200 8.250 3.350 Hmax_095 : 17.500 25.700 3.201 7.105 Hmax_100 : 17.500 24.700 3.201 7.620 Hmax_105 : 15.600 24.300 2.843 6.463 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3726 0.6274 DFMC : 0.1583 0.8417 This protein is probably imported in mitochondria. f(Ser) = 0.0889 f(Arg) = 0.0667 CMi = 0.54422 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 271 SPAC1687.02 MRVYLISFFFTAIYVVSLYTFPVARPRPSLNRNDPKVITARCISVLLASSVCCILTRLIIGPSLNVFTFPTDQVLKSLLH 80 AATIFIGPLYEVWIVDKEYRLFFIHLKDCLSNAIAWRNIIIGPLSEELTFRCCIVPICEAAGWSRLKIIFVAPLLFGMAH 160 IHHTYEFLLAYPNAYIAAALQTVVQFSYTTVFGWYTTHLFLSTHSLFPSFLVHAFCNSMGLPTLYGKIGNRNQTRIYYTL 240 LLLGVLIFYMTWGITDFNNHQDFEPRLVPLN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC1687.02 2 -----MR|VY 0.083 . SPAC1687.02 25 YTFPVAR|PR 0.073 . SPAC1687.02 27 FPVARPR|PS 0.074 . SPAC1687.02 32 PRPSLNR|ND 0.095 . SPAC1687.02 36 LNRNDPK|VI 0.071 . SPAC1687.02 41 PKVITAR|CI 0.133 . SPAC1687.02 57 VCCILTR|LI 0.073 . SPAC1687.02 76 PTDQVLK|SL 0.073 . SPAC1687.02 97 EVWIVDK|EY 0.058 . SPAC1687.02 100 IVDKEYR|LF 0.090 . SPAC1687.02 107 LFFIHLK|DC 0.059 . SPAC1687.02 117 SNAIAWR|NI 0.136 . SPAC1687.02 131 SEELTFR|CC 0.081 . SPAC1687.02 145 EAAGWSR|LK 0.074 . SPAC1687.02 147 AGWSRLK|II 0.067 . SPAC1687.02 227 LPTLYGK|IG 0.059 . SPAC1687.02 231 YGKIGNR|NQ 0.076 . SPAC1687.02 235 GNRNQTR|IY 0.106 . SPAC1687.02 266 HQDFEPR|LV 0.097 . ____________________________^_________________

  • Fasta :-

    >SPAC1687.02 CTTGCTGACATGCCATCTCTTCCTTGCACTTTATAAAAATCTGTATTAGCTAGCCTAGGA TCATTGCTTTCATTTTGGGAAAGTAAAGATTTTTATGCTTTTTATTTAAGCTTTTATTCA TAAACTTTGATTACCCATTATTTTCAATTGCTATTAATCACCCTTTTTATAGTAAGATAA CCACGTAGCATTACCAGAGGAAGAATCGATTGGAAACTACATAATTTACAGTTTATTTTT ATGAGAGTTTATTTAATTTCGTTCTTTTTCACGGCGATTTACGTTGTTTCTTTATACACG TTCCCAGTTGCTCGACCAAGGCCATCTCTTAATCGGAATGACCCGAAAGTTATTACGGCA CGTTGCATAAGTGTCTTATTAGCATCATCTGTATGTTGTATTTTAACAAGGTTGATCATT GGCCCTTCATTGAATGTATTCACTTTCCCGACAGACCAAGTTTTGAAAAGTTTACTACAC GCAGCAACTATATTTATTGGGCCCCTGTATGAAGTTTGGATTGTTGACAAAGAATATAGA CTCTTCTTTATACATTTGAAAGACTGCCTGTCGAATGCGATTGCTTGGCGAAACATTATT ATTGGTCCTCTTTCTGAAGAACTTACATTTAGATGTTGCATAGTACCAATTTGTGAAGCT GCTGGGTGGTCAAGGCTTAAAATTATATTTGTTGCGCCTCTGCTGTTTGGAATGGCGCAT ATTCATCATACCTATGAATTTCTACTTGCCTATCCGAATGCATATATAGCTGCCGCTCTT CAAACTGTTGTTCAGTTTTCATACACCACAGTTTTTGGATGGTATACAACACATCTATTC CTTTCCACGCATAGCTTATTTCCTTCATTTTTAGTACATGCTTTTTGTAATTCAATGGGG CTGCCAACTTTGTACGGAAAAATTGGAAACAGAAATCAGACTAGGATTTATTACACGTTA CTATTGTTAGGGGTTTTGATATTTTATATGACTTGGGGTATTACTGATTTTAATAATCAT CAAGACTTTGAACCAAGACTGGTGCCATTAAACTAAATAATAAAAGACTCCGGCTTCATC TGTGACTTAGCAAGGCGACATACTAAACCACTTAACTGCAACAAGGTTTGCACACCCTCT AAAATAATCATATGAGTTTGGCCAATTTCCTTAAGCATTTCTAATCTTGAAAATTCCGGA ATACTGTCCATTGTCTTTACTACTCTAAACATATTAGTGACAATGTCCACAGCACTGAAC CCCAAATCCCATATTCCCTGAAGTTTTTCAAGGGCGACGTCGATGTTTCCAGATTGACAA GCAGTTAGCATGGCATGTATCGCTACAGGTGAAGGCTGATCGGCGACCCGGAAAACGTTT TCACCGTTCACAAGACCGAATCCAGCAACAGTGCTCTGTAGATTGTTCACTGCTTGACGC ATATCACCTTCTGCTGTCATGATAAGGGCAGCCAAACCATCATCTGTATAATTGACTTTT TCCGCTTTACATATATTCAATAAACGCTGTAAAACCTGTTGATCCGTAAGACGTGAGTAT CGGAGAATTGCACACCGCGATTGAATAGGTTCAATAATTTTGTTGGATTGATTGCAAGCA AGTGCAAAACGCGTTGTATTACTGTAGATTTCCATAGTTCTACGCAAAGCTTGTTGAGCT CCAGCCGTCATACTATCTGCTTCGTCTAAAATAATGATCTTATGCCTTCCAGGTGGCAGT ATGACTTTTTTCTGTGCGAATGCTTTAATTCTATTTCTCACTACATCGATACCTCGTTCA TCTGAAGCATTTAATTCTAATACACCTTCCTTATATGCTGGGCCAAGTAATGCATGTGCT AAACAAAGAATAGACGTCGTTTTTCCGATACCAGGCATTCCCTATAAATATAAGTCAGCA TGTAGTATAAATAATAATTAAAAAAAAATAGGTTACCGAAATAACTAGATGAGGCATATT CCCTTCCTTGGCAATAACTTTAAGTCGGTCAATCGTCTCCTCGTTACCAACAATGTCATC CAGGACGATTGGACGATACTTTTCGACCCTATAAGTTTATAGATCAGCATACTATATTAT ATTGAACCTTTAAATTATGAAAAGATGCCTGAGTCACCAAGAAGCAATCGTAATAGCTGA ACACTAAAACCTTCATAAAGGACGTTTTAATTGCTCATAATATATACATACCATGGCAGC TCATAAGCTACAGAGTTATTTTTCTCTCCAAATACTGATGATGATACTGCA
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IDSitePeptideScoreMethod
SPAC1687.0229 SRPRPSLNRN0.991unsp

SPAC1687.02      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India