SPAC17A5.04c | spore wall assembly ADAM family peptidase Mde10

_IDPredictionOTHERSPmTPCS_Position
SPAC17A5.04cSP0.0001690.9998270.000004CS pos: 17-18. SYA-EI. Pr: 0.8072
No Results

  • Fasta :-

    >SPAC17A5.04c MRLVLLFSCVLAVSSYAEIILAHSDENLLSRTKNNLSKWNENRLYDYGSKSTMSLPVSSL FPALQTLWIGVVADCSYVTHFTSRMEAKKHIFQEFEGVSTLYEDSFNINVQIHSLILPSA HDCSANVVDRPEISMSPRISIEEKLEIFSKWKYESPGNNVFEAISPHERESFPSEPQVSV LFTSSVKRSPHGVSWFATICSETHIENEWHVGPLSVVSAYPNDRLVVAHEIGHILGLIHD CNKKSCGDHSEACCPLSSSLCDAQELYIMNPSNSYTYANLRFSDCSILQLHSLVEKKYVS LSCLSKPSEKSVLRLGTCGNGIVEDGEECDCGEDCENNPCCDGKTCKLTKGSLCDDQQDA CCYQCHFKNAGTLCRQSTNPCDKPEFCTGISSKCPVDENWDDGRICQDSLGMGSCASGVC TSASRQCKKLTNFSSLSCHSDSCKVSCQNEDGTCFISAKDYIDGTRCRGGLCYNGVCVPI EGSSASWSKQPSLFCASGTMLISLAVIAWFFW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/702 Sequence name : 702 Sequence length : 512 VALUES OF COMPUTED PARAMETERS Coef20 : 4.953 CoefTot : 1.084 ChDiff : -18 ZoneTo : 17 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.194 2.041 0.437 0.746 MesoH : -0.169 0.347 -0.162 0.237 MuHd_075 : 10.957 4.505 3.632 1.212 MuHd_095 : 13.943 2.669 3.297 1.647 MuHd_100 : 5.949 6.197 1.181 2.072 MuHd_105 : 16.262 13.357 4.027 4.706 Hmax_075 : 17.500 19.483 4.239 5.670 Hmax_095 : 14.700 15.487 3.298 4.760 Hmax_100 : 16.700 19.800 3.263 6.040 Hmax_105 : 18.783 24.033 4.375 7.257 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9640 0.0360 DFMC : 0.9147 0.0853
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 512 SPAC17A5.04c MRLVLLFSCVLAVSSYAEIILAHSDENLLSRTKNNLSKWNENRLYDYGSKSTMSLPVSSLFPALQTLWIGVVADCSYVTH 80 FTSRMEAKKHIFQEFEGVSTLYEDSFNINVQIHSLILPSAHDCSANVVDRPEISMSPRISIEEKLEIFSKWKYESPGNNV 160 FEAISPHERESFPSEPQVSVLFTSSVKRSPHGVSWFATICSETHIENEWHVGPLSVVSAYPNDRLVVAHEIGHILGLIHD 240 CNKKSCGDHSEACCPLSSSLCDAQELYIMNPSNSYTYANLRFSDCSILQLHSLVEKKYVSLSCLSKPSEKSVLRLGTCGN 320 GIVEDGEECDCGEDCENNPCCDGKTCKLTKGSLCDDQQDACCYQCHFKNAGTLCRQSTNPCDKPEFCTGISSKCPVDENW 400 DDGRICQDSLGMGSCASGVCTSASRQCKKLTNFSSLSCHSDSCKVSCQNEDGTCFISAKDYIDGTRCRGGLCYNGVCVPI 480 EGSSASWSKQPSLFCASGTMLISLAVIAWFFW 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC17A5.04c 2 -----MR|LV 0.081 . SPAC17A5.04c 31 DENLLSR|TK 0.074 . SPAC17A5.04c 33 NLLSRTK|NN 0.052 . SPAC17A5.04c 38 TKNNLSK|WN 0.082 . SPAC17A5.04c 43 SKWNENR|LY 0.106 . SPAC17A5.04c 50 LYDYGSK|ST 0.067 . SPAC17A5.04c 84 VTHFTSR|ME 0.086 . SPAC17A5.04c 88 TSRMEAK|KH 0.089 . SPAC17A5.04c 89 SRMEAKK|HI 0.205 . SPAC17A5.04c 130 SANVVDR|PE 0.088 . SPAC17A5.04c 138 EISMSPR|IS 0.116 . SPAC17A5.04c 144 RISIEEK|LE 0.062 . SPAC17A5.04c 150 KLEIFSK|WK 0.066 . SPAC17A5.04c 152 EIFSKWK|YE 0.077 . SPAC17A5.04c 169 AISPHER|ES 0.145 . SPAC17A5.04c 187 LFTSSVK|RS 0.058 . SPAC17A5.04c 188 FTSSVKR|SP 0.369 . SPAC17A5.04c 224 SAYPNDR|LV 0.123 . SPAC17A5.04c 243 LIHDCNK|KS 0.059 . SPAC17A5.04c 244 IHDCNKK|SC 0.147 . SPAC17A5.04c 281 YTYANLR|FS 0.094 . SPAC17A5.04c 296 LHSLVEK|KY 0.060 . SPAC17A5.04c 297 HSLVEKK|YV 0.171 . SPAC17A5.04c 306 SLSCLSK|PS 0.074 . SPAC17A5.04c 310 LSKPSEK|SV 0.100 . SPAC17A5.04c 314 SEKSVLR|LG 0.079 . SPAC17A5.04c 344 NPCCDGK|TC 0.062 . SPAC17A5.04c 347 CDGKTCK|LT 0.069 . SPAC17A5.04c 350 KTCKLTK|GS 0.061 . SPAC17A5.04c 368 CYQCHFK|NA 0.084 . SPAC17A5.04c 375 NAGTLCR|QS 0.074 . SPAC17A5.04c 383 STNPCDK|PE 0.065 . SPAC17A5.04c 393 CTGISSK|CP 0.062 . SPAC17A5.04c 404 ENWDDGR|IC 0.107 . SPAC17A5.04c 425 VCTSASR|QC 0.069 . SPAC17A5.04c 428 SASRQCK|KL 0.158 . SPAC17A5.04c 429 ASRQCKK|LT 0.097 . SPAC17A5.04c 444 CHSDSCK|VS 0.089 . SPAC17A5.04c 459 TCFISAK|DY 0.098 . SPAC17A5.04c 466 DYIDGTR|CR 0.074 . SPAC17A5.04c 468 IDGTRCR|GG 0.078 . SPAC17A5.04c 489 SSASWSK|QP 0.065 . ____________________________^_________________

  • Fasta :-

    >SPAC17A5.04c ATGCGGCTCGTTTTACTGTTTTCGTGTGTTTTGGCGGTATCATCATACGCTGAGATTATT TTAGCACATTCTGACGAGAATTTACTTTCTCGTACTAAAAACAATCTAAGTAAATGGAAT GAAAACAGGCTGTATGATTATGGATCTAAATCTACCATGTCTCTTCCCGTCAGTTCGTTA TTTCCTGCACTTCAAACCTTATGGATAGGTGTTGTAGCTGACTGTTCATATGTTACTCAT TTTACGAGTCGCATGGAAGCCAAAAAACATATTTTTCAGGAATTTGAAGGTGTTTCAACC CTTTATGAAGATTCTTTTAATATCAACGTTCAAATCCATAGTTTAATTCTTCCTTCAGCA CACGATTGTTCAGCTAATGTTGTTGATCGACCTGAAATCAGCATGTCTCCGCGCATCTCT ATAGAGGAAAAGCTAGAAATTTTTAGTAAATGGAAGTATGAATCTCCAGGCAATAATGTT TTTGAAGCAATTTCACCACATGAGCGAGAATCATTTCCATCGGAACCCCAGGTTTCGGTA TTGTTTACTAGCTCTGTCAAAAGAAGCCCTCATGGAGTATCTTGGTTTGCTACTATTTGT TCCGAAACGCACATTGAAAATGAATGGCATGTTGGACCATTAAGTGTTGTGTCCGCTTAC CCAAATGACAGGTTAGTTGTCGCGCACGAAATAGGACACATATTGGGTTTGATTCACGAC TGCAATAAAAAATCTTGTGGGGATCATTCGGAGGCTTGTTGCCCACTTTCCAGTTCGCTT TGCGATGCTCAAGAATTATATATAATGAACCCCTCTAACTCATACACATATGCCAACCTT AGATTCAGTGATTGTTCTATTTTGCAATTACACTCTTTGGTAGAAAAGAAATATGTATCA CTTTCGTGCCTTTCCAAACCTTCTGAAAAGTCTGTTTTACGACTTGGAACATGTGGAAAC GGCATCGTTGAAGATGGTGAAGAATGCGATTGTGGAGAGGATTGTGAAAATAACCCTTGT TGCGACGGGAAAACATGTAAGCTTACGAAAGGTTCATTGTGTGATGACCAGCAGGATGCC TGCTGTTATCAATGTCATTTTAAAAATGCCGGTACTTTATGTAGGCAATCAACAAACCCT TGCGACAAGCCTGAATTCTGTACAGGAATATCATCCAAGTGTCCCGTAGATGAAAACTGG GATGATGGAAGGATTTGTCAAGATAGTCTAGGGATGGGCTCGTGTGCATCTGGTGTTTGT ACATCTGCGTCACGTCAATGCAAGAAACTTACCAACTTTAGCAGTTTGTCGTGTCATTCT GATAGTTGTAAGGTGTCTTGTCAAAACGAAGACGGAACTTGTTTTATCAGCGCCAAAGAC TACATTGATGGGACTCGATGTCGCGGCGGTTTATGCTATAACGGCGTTTGTGTTCCCATC GAAGGATCTTCGGCTTCATGGTCTAAACAACCATCGCTTTTTTGTGCTTCAGGTACTATG CTAATATCGTTAGCCGTAATAGCATGGTTTTTCTGGTGAACGCCTTTTCGTTTCTTTTGC AATCATCTACCTTATATAATTTGTAAAGCATAGCATCGTTGATAGACTCTATACATTCAT CAAACTTACAGGATAATAAAAATACCTGTTTTCATAACCCCAACATTTATGCCTAAAAGA AT
  • Download Fasta

  • Fasta :-

    MRLVLLFSCVLAVSSYAEIILAHSDENLLSRTKNNLSKWNENRLYDYGSKSTMSLPVSSL FPALQTLWIGVVADCSYVTHFTSRMEAKKHIFQEFEGVSTLYEDSFNINVQIHSLILPSA HDCSANVVDRPEISMSPRISIEEKLEIFSKWKYESPGNNVFEAISPHERESFPSEPQVSV LFTSSVKRSPHGVSWFATICSETHIENEWHVGPLSVVSAYPNDRLVVAHEIGHILGLIHD CNKKSCGDHSEACCPLSSSLCDAQELYIMNPSNSYTYANLRFSDCSILQLHSLVEKKYVS LSCLSKPSEKSVLRLGTCGNGIVEDGEECDCGEDCENNPCCDGKTCKLTKGSLCDDQQDA CCYQCHFKNAGTLCRQSTNPCDKPEFCTGISSKCPVDENWDDGRICQDSLGMGSCASGVC TSASRQCKKLTNFSSLSCHSDSCKVSCQNEDGTCFISAKDYIDGTRCRGGLCYNGVCVPI EGSSASWSKQPSLFCASGTMLISLAVIAWFFW

  • title: active site
  • coordinates: H229,E230,H233,H239
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC17A5.04c24 SILAHSDENL0.991unspSPAC17A5.04c140 SSPRISIEEK0.997unsp

SPAC17A5.04c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India