SPAC1F3.10c | mitochondrial intermediate peptidase Oct1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC1F3.10cOTHER0.7728000.0002700.226930
No Results

  • Fasta :-

    >SPAC1F3.10c MQVRTLLTLGKKKVIGNRQCILSLYRKYSNVQSRKAEDQLLRQIFDDQNIAVNQITKRNG IQGVGLFRNHFLSDKDTGFLRLAETASEKCKAVIEDLLLEDTEDGSIVVSKFDRISNLLC SVIDLFEFVRCAHPDKMVVMKAEEAYSYLFELMNTLNTHQGLYEKLKCSLQQTPTLKDTD PEAYTVGRVFLQDFEKSGVNLESSKRNSFVKKSSESATLGRAFFNNSMNRPQRYLTISKQ RLAGSDPYFVRSLSKNDKNFIMIPTVGYEGTQALISVANPDVRKEIYMEGHKGTVEEVEL LNSYLRSKAEVAKLVGKSSFADLQLIDKMANAPKHVVEFLENLSLKNSSVLKKILNNLAL MKKKELNLNFLPSFDVWDREYYTARYKQSLINQKPSLNPSITNYRRFFSVGTVIQGLSRL FSSLYGLRFVPADISPGEVWHPDVNKVNVYNENDHVMGVIYFDLFARTGKTDGAAHFTIR SSRELDLTSFDDSISLGFDDATNIRVKDNKRYQIPVISLLCNFVRSSGMDPTFLDLWDVK TLFHEMGHAMHSILGHTKYQNLAGTRCATDFVELPSIIMEFFMSNPAVLPLYARYEGTEI PLPVQVLNHHNMVENSSAPLDLQSQICMAMVDQLFHSKVVLDPSFNSIDEVTNVTRKFSG FESAPPAAWYLQFSHLYGYSATYYSYIFDTVLASLIFSKLFAGNPLSREAGEKFRKAILR WGGSRSPWECVAEALEQPILATGGEEAMRRIGSEGIKATSTF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/604 Sequence name : 604 Sequence length : 762 VALUES OF COMPUTED PARAMETERS Coef20 : 4.176 CoefTot : -0.485 ChDiff : 3 ZoneTo : 36 KR : 9 DE : 0 CleavSite : 29 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.559 0.084 0.578 MesoH : -0.122 0.367 -0.311 0.269 MuHd_075 : 41.814 21.496 13.685 8.469 MuHd_095 : 35.034 17.443 9.516 8.263 MuHd_100 : 25.666 15.326 6.579 7.136 MuHd_105 : 24.801 17.811 6.583 6.113 Hmax_075 : 10.617 10.500 3.970 4.107 Hmax_095 : 3.000 7.088 0.695 2.280 Hmax_100 : 3.900 6.300 -0.703 2.610 Hmax_105 : 3.400 11.800 1.097 3.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0578 0.9422 DFMC : 0.0551 0.9449 This protein is probably imported in mitochondria. f(Ser) = 0.0833 f(Arg) = 0.1111 CMi = 0.36946 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 762 SPAC1F3.10c MQVRTLLTLGKKKVIGNRQCILSLYRKYSNVQSRKAEDQLLRQIFDDQNIAVNQITKRNGIQGVGLFRNHFLSDKDTGFL 80 RLAETASEKCKAVIEDLLLEDTEDGSIVVSKFDRISNLLCSVIDLFEFVRCAHPDKMVVMKAEEAYSYLFELMNTLNTHQ 160 GLYEKLKCSLQQTPTLKDTDPEAYTVGRVFLQDFEKSGVNLESSKRNSFVKKSSESATLGRAFFNNSMNRPQRYLTISKQ 240 RLAGSDPYFVRSLSKNDKNFIMIPTVGYEGTQALISVANPDVRKEIYMEGHKGTVEEVELLNSYLRSKAEVAKLVGKSSF 320 ADLQLIDKMANAPKHVVEFLENLSLKNSSVLKKILNNLALMKKKELNLNFLPSFDVWDREYYTARYKQSLINQKPSLNPS 400 ITNYRRFFSVGTVIQGLSRLFSSLYGLRFVPADISPGEVWHPDVNKVNVYNENDHVMGVIYFDLFARTGKTDGAAHFTIR 480 SSRELDLTSFDDSISLGFDDATNIRVKDNKRYQIPVISLLCNFVRSSGMDPTFLDLWDVKTLFHEMGHAMHSILGHTKYQ 560 NLAGTRCATDFVELPSIIMEFFMSNPAVLPLYARYEGTEIPLPVQVLNHHNMVENSSAPLDLQSQICMAMVDQLFHSKVV 640 LDPSFNSIDEVTNVTRKFSGFESAPPAAWYLQFSHLYGYSATYYSYIFDTVLASLIFSKLFAGNPLSREAGEKFRKAILR 720 WGGSRSPWECVAEALEQPILATGGEEAMRRIGSEGIKATSTF 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC1F3.10c 4 ---MQVR|TL 0.081 . SPAC1F3.10c 11 TLLTLGK|KK 0.062 . SPAC1F3.10c 12 LLTLGKK|KV 0.101 . SPAC1F3.10c 13 LTLGKKK|VI 0.104 . SPAC1F3.10c 18 KKVIGNR|QC 0.083 . SPAC1F3.10c 26 CILSLYR|KY 0.078 . SPAC1F3.10c 27 ILSLYRK|YS 0.095 . SPAC1F3.10c 34 YSNVQSR|KA 0.217 . SPAC1F3.10c 35 SNVQSRK|AE 0.116 . SPAC1F3.10c 42 AEDQLLR|QI 0.097 . SPAC1F3.10c 57 AVNQITK|RN 0.073 . SPAC1F3.10c 58 VNQITKR|NG 0.202 . SPAC1F3.10c 68 QGVGLFR|NH 0.071 . SPAC1F3.10c 75 NHFLSDK|DT 0.074 . SPAC1F3.10c 81 KDTGFLR|LA 0.090 . SPAC1F3.10c 89 AETASEK|CK 0.062 . SPAC1F3.10c 91 TASEKCK|AV 0.108 . SPAC1F3.10c 111 GSIVVSK|FD 0.076 . SPAC1F3.10c 114 VVSKFDR|IS 0.081 . SPAC1F3.10c 130 DLFEFVR|CA 0.097 . SPAC1F3.10c 136 RCAHPDK|MV 0.081 . SPAC1F3.10c 141 DKMVVMK|AE 0.078 . SPAC1F3.10c 165 HQGLYEK|LK 0.058 . SPAC1F3.10c 167 GLYEKLK|CS 0.083 . SPAC1F3.10c 177 QQTPTLK|DT 0.079 . SPAC1F3.10c 188 EAYTVGR|VF 0.081 . SPAC1F3.10c 196 FLQDFEK|SG 0.074 . SPAC1F3.10c 205 VNLESSK|RN 0.061 . SPAC1F3.10c 206 NLESSKR|NS 0.136 . SPAC1F3.10c 211 KRNSFVK|KS 0.084 . SPAC1F3.10c 212 RNSFVKK|SS 0.346 . SPAC1F3.10c 221 ESATLGR|AF 0.087 . SPAC1F3.10c 230 FNNSMNR|PQ 0.085 . SPAC1F3.10c 233 SMNRPQR|YL 0.393 . SPAC1F3.10c 239 RYLTISK|QR 0.053 . SPAC1F3.10c 241 LTISKQR|LA 0.103 . SPAC1F3.10c 251 SDPYFVR|SL 0.179 . SPAC1F3.10c 255 FVRSLSK|ND 0.059 . SPAC1F3.10c 258 SLSKNDK|NF 0.074 . SPAC1F3.10c 283 VANPDVR|KE 0.089 . SPAC1F3.10c 284 ANPDVRK|EI 0.091 . SPAC1F3.10c 292 IYMEGHK|GT 0.058 . SPAC1F3.10c 306 LLNSYLR|SK 0.115 . SPAC1F3.10c 308 NSYLRSK|AE 0.064 . SPAC1F3.10c 313 SKAEVAK|LV 0.134 . SPAC1F3.10c 317 VAKLVGK|SS 0.084 . SPAC1F3.10c 328 DLQLIDK|MA 0.063 . SPAC1F3.10c 334 KMANAPK|HV 0.087 . SPAC1F3.10c 346 LENLSLK|NS 0.068 . SPAC1F3.10c 352 KNSSVLK|KI 0.071 . SPAC1F3.10c 353 NSSVLKK|IL 0.121 . SPAC1F3.10c 362 NNLALMK|KK 0.062 . SPAC1F3.10c 363 NLALMKK|KE 0.068 . SPAC1F3.10c 364 LALMKKK|EL 0.088 . SPAC1F3.10c 379 SFDVWDR|EY 0.082 . SPAC1F3.10c 385 REYYTAR|YK 0.111 . SPAC1F3.10c 387 YYTARYK|QS 0.055 . SPAC1F3.10c 394 QSLINQK|PS 0.053 . SPAC1F3.10c 405 PSITNYR|RF 0.084 . SPAC1F3.10c 406 SITNYRR|FF 0.176 . SPAC1F3.10c 419 VIQGLSR|LF 0.071 . SPAC1F3.10c 428 SSLYGLR|FV 0.100 . SPAC1F3.10c 446 WHPDVNK|VN 0.061 . SPAC1F3.10c 467 YFDLFAR|TG 0.074 . SPAC1F3.10c 470 LFARTGK|TD 0.181 . SPAC1F3.10c 480 AAHFTIR|SS 0.142 . SPAC1F3.10c 483 FTIRSSR|EL 0.205 . SPAC1F3.10c 505 DDATNIR|VK 0.084 . SPAC1F3.10c 507 ATNIRVK|DN 0.070 . SPAC1F3.10c 510 IRVKDNK|RY 0.064 . SPAC1F3.10c 511 RVKDNKR|YQ 0.172 . SPAC1F3.10c 525 LLCNFVR|SS 0.147 . SPAC1F3.10c 540 LDLWDVK|TL 0.067 . SPAC1F3.10c 558 SILGHTK|YQ 0.066 . SPAC1F3.10c 566 QNLAGTR|CA 0.088 . SPAC1F3.10c 594 VLPLYAR|YE 0.105 . SPAC1F3.10c 638 DQLFHSK|VV 0.060 . SPAC1F3.10c 656 EVTNVTR|KF 0.096 . SPAC1F3.10c 657 VTNVTRK|FS 0.104 . SPAC1F3.10c 699 ASLIFSK|LF 0.058 . SPAC1F3.10c 708 AGNPLSR|EA 0.130 . SPAC1F3.10c 713 SREAGEK|FR 0.084 . SPAC1F3.10c 715 EAGEKFR|KA 0.091 . SPAC1F3.10c 716 AGEKFRK|AI 0.085 . SPAC1F3.10c 720 FRKAILR|WG 0.108 . SPAC1F3.10c 725 LRWGGSR|SP 0.112 . SPAC1F3.10c 749 GGEEAMR|RI 0.094 . SPAC1F3.10c 750 GEEAMRR|IG 0.170 . SPAC1F3.10c 757 IGSEGIK|AT 0.078 . ____________________________^_________________

  • Fasta :-

    >SPAC1F3.10c TTTATATGTATACTATTCATGCGGATACTTTTTGTGGTTGGTATTTCAAGTAAACCCTCC TGGAAATATATACCATTCATATAGCCTGTACATGTACCAAAAATTTGTCGCATATTACGA TGCAAGTAAGAACTTTGCTTACATTGGGAAAAAAAAAAGTAATTGGAAATAGGCAGTGCA TTCTTAGTCTTTATCGAAAATATTCTAATGTTCAAAGTCGCAAAGCGGAAGACCAATTGT TGCGTCAAATTTTTGATGATCAGAATATAGCTGTGAACCAGATAACGAAAAGAAATGGAA TTCAGGGAGTAGGATTGTTTCGTAATCACTTCCTTTCCGACAAAGATACCGGCTTCCTAA GGCTCGCGGAAACTGCATCTGAAAAATGTAAGGCCGTGATTGAGGATCTTTTGCTCGAGG ATACTGAAGACGGGTCAATTGTAGTCAGCAAATTTGACAGGATTTCTAACTTACTATGCA GTGTCATTGACCTTTTTGAGTTTGTGCGCTGCGCCCATCCTGACAAGATGGTGGTAATGA AAGCAGAAGAAGCTTACAGTTATCTATTTGAGCTGATGAACACTTTAAACACTCATCAAG GTCTTTACGAAAAATTAAAGTGTTCTTTACAACAGACTCCTACGTTGAAAGATACAGATC CTGAAGCATATACTGTTGGAAGAGTATTCCTCCAAGATTTTGAAAAATCGGGCGTAAATT TAGAGAGCTCGAAAAGAAACTCCTTTGTTAAAAAGTCCTCTGAATCTGCAACTCTTGGAA GAGCATTTTTTAATAATAGCATGAATCGTCCTCAGCGTTATTTAACTATTTCTAAGCAAC GTCTGGCTGGTTCGGACCCATATTTTGTACGCTCACTCTCTAAGAATGACAAAAACTTTA TTATGATTCCAACTGTTGGATACGAAGGTACACAGGCCTTGATTAGTGTAGCAAATCCCG ACGTCAGGAAAGAAATTTACATGGAAGGTCATAAAGGAACAGTTGAAGAAGTCGAATTGC TAAATTCCTATTTGAGGTCTAAAGCGGAAGTTGCGAAACTAGTGGGAAAAAGTAGTTTTG CAGATTTACAACTTATAGATAAAATGGCTAATGCTCCTAAACATGTTGTTGAATTTTTAG AGAACTTATCATTAAAAAATTCTTCCGTGTTAAAAAAGATTTTAAACAATCTCGCGTTAA TGAAGAAAAAAGAGTTAAACTTGAATTTTCTTCCATCATTTGATGTTTGGGACAGGGAAT ATTATACTGCTCGCTATAAACAATCTCTTATAAATCAAAAGCCTTCTTTAAACCCTTCTA TAACGAATTATCGGCGTTTTTTTTCTGTTGGTACAGTTATTCAAGGTCTATCTAGACTAT TTAGTTCTTTATATGGGCTTCGTTTTGTTCCAGCGGACATTTCCCCTGGTGAGGTATGGC ATCCTGATGTAAATAAGGTCAATGTTTACAATGAAAATGATCATGTAATGGGTGTAATTT ATTTCGATCTATTTGCTCGAACAGGAAAAACAGATGGAGCTGCTCATTTTACAATTCGTT CTTCTCGGGAATTAGACTTGACAAGCTTTGACGATTCTATAAGTCTTGGATTTGATGATG CTACTAATATAAGGGTCAAGGATAACAAACGGTATCAAATACCTGTCATTTCGTTATTGT GTAATTTCGTACGTTCTAGTGGAATGGATCCTACCTTTTTAGATTTGTGGGATGTGAAAA CACTTTTTCACGAGATGGGGCATGCCATGCATTCCATTCTAGGTCATACTAAATATCAGA ACTTAGCCGGAACTCGTTGTGCAACCGACTTTGTTGAACTTCCTTCAATTATTATGGAGT TTTTTATGTCAAATCCAGCCGTATTACCGCTTTATGCTCGCTACGAAGGAACTGAGATTC CATTACCTGTACAAGTTTTGAACCATCATAACATGGTTGAAAATAGTTCAGCACCCTTAG ATTTACAATCTCAAATTTGTATGGCTATGGTGGATCAATTGTTTCACTCGAAGGTTGTCT TAGATCCGTCATTTAATTCTATCGATGAAGTTACTAATGTAACCAGAAAGTTCAGTGGGT TTGAGTCTGCTCCACCTGCTGCTTGGTATCTTCAGTTTAGTCATCTTTATGGATATAGCG CTACTTATTATTCATACATTTTTGATACGGTATTGGCTTCGCTAATCTTTAGTAAACTTT TTGCTGGAAATCCATTAAGCCGTGAGGCTGGTGAGAAATTTCGTAAAGCCATCCTACGAT GGGGTGGCAGTAGAAGCCCATGGGAATGTGTTGCAGAAGCCCTTGAACAACCTATATTAG CAACGGGCGGCGAAGAGGCCATGCGTCGAATAGGAAGTGAAGGTATTAAAGCGACGTCCA CCTTTTAATGGAATGATGTTCCAGTTATGAATTTAAATAATTTATTTATGAATTATAATG AAATACTAAATTTATGTAAAGTCGTAAGGTTTGAAACACATTTTGAAAGCTTCACTCTCA GCTTTTTCTTCATCTTCTGTCTGAACGCATTTTCTCCAATCAACCCTATCCTCAAGACCC AAAATTTTTGCAGCAGCACGTCGCCCAAACTGTAAATCAAATCGTTCTCTTAGTTGTAAT CGATGAATTAAGATTTTTCCAGAGGGTAGAAATACACGGAAATAGTTCAGCTCATGAGGT TCTACATCCCTTTCCTCAAAGTCGTAACCAGCTTCCTTTGCCATTTCAAGGAAGACTGAT TCAATACGATGTGAGGAAATCTTGGGGATGGGAATCATTTGCCAATGCAAATGAACTCCG TTAGCTCTACTAATTTCATATACTAAAGCATCGGAATCACAAGCATTGTACATATCAGTT ACAGCTTTACGAAATCGATTCATTTCATTTAAAGTTTTCTCATATGAGGTGTCCGACAAA GTACTTAAAGCAGAAGCATGCGCAATTGGTATAATCAAAACATGACCAGAGGAAGCTAAA GCTGGGGTATTCGATGCCGTGGTAGTAAGAGGGCCTTTGGGCAACGCTGAGTCGTTAGTA TAAAAAAGAGTAAAATTTAAACAGCGTGTCGCAAACATTGGAGTGTATAAACGTACCCAT GTAAGCTTCGTTACCAATAGCGACTATTAAGTGAAGTGCAACATTTGGATTACTCAAACA AAAGAAGCATGACCCGGCTGAGAAAAGAAGTTAGTGACGGTGGAAAAAACGCAGAGATAA GAAGCGGAACTCACGTCCAACTTTAGACCGTCTATTATTGAGCGAAGTGCCTGATTCGGA CTTGTGCAAATTATTGAGTGCACTATGTGACTCTGACTTGTGCATTTTGTTGAGGGACGA GCTAGAATCTTTTTTAGATTTAAAGAGAGCAGTGCTTGATTTAGATTTATGGAATTTATT TGTTTGCTGGGGAATAATTTGATCTTCTGAAGCACGCTTTAAGGGAATTGGCCTATGCTC AAATGGAGAAGCAGTACAGTTAGGAGGAGCTGGCTGCATGTACTCAGTTGTCAAGGGGTA GAGAGTAAAAGCGTATGAAAACTTCTCATTTTTGGAGTTTTTGAAAGGGGCCAAAGCCAC GAAATGAGTGACAGTACCAGTGTTAACATTAATAGCGGCAGAGTTTTTGTAGGGTTCACG TTCGTAGTAAACTGGCCCAGGAACAAAAAAGTACTGCGGCATACAATTAGCAGCTAGTGC AGCTAACGGCATACAACCTTTAGGCAACTTTCTCTCAGGGAGAGTAGAGTTTTCTTGTAC GTCCTCCGGCCATTCAGAGCTGAACAAAATGTCACAACGTTTAGACAACTTTTGTACATC ACTTCGATGAAAACACTTTTCATTTAAGCTTTGCTCAAATTTTTCGGGAGGTTGGTAGTA TTTCTCCTCATTATAAGATCCACCAAGTTGAGCAATTGTAAACTTGTAAAAAGTTTTCAT AAACCCACAAATACCCATACAAAACAAGTTAGGTGCTACCTCTGGTCCATACATGGCCAT ATGCGAAATAATGGACTCTGGCAAACCAGCAGTACCAACCCCGAAATAGACTGGTATAGG AACTACAGCTCAGGTTAGCAACAAGAATGAATAAGAAGAAAGATTTATCAATCGTGATTA AAGCATTAAAGAAAAGAATTTCTCGTTCGATAAAACCGGCCATTCAAAATCATACCCTTT ACTTTTTCATTTTTTAGTTTAACAACGTCCGCACTAGTTGTACGCTTGTGGGAAAACAAA TTGCCAAGACAAATAGCAAATTTAAAACCATGCTGTTTGTGAAGATCAGCAATATACTCG ATAGCTTCAATAACTCGCCCATCAGCAGACCCAATAACCAGCCTATTCGAATCTATGTTA GCGAGTTGCAAGACGTACTGAAAATTTTTCAATCTCGTTCACAAACTGAGTTGAAGTAGT TAAATATATGTATACTTACACATCAGCCGGTTTCAGTTTGTCATAAAAAATCATATTTAG AAAATCTCGGCGGTTGGCGTATATATTTAATTC
  • Download Fasta

  • Fasta :-

    MQVRTLLTLGKKKVIGNRQCILSLYRKYSNVQSRKAEDQLLRQIFDDQNIAVNQITKRNG IQGVGLFRNHFLSDKDTGFLRLAETASEKCKAVIEDLLLEDTEDGSIVVSKFDRISNLLC SVIDLFEFVRCAHPDKMVVMKAEEAYSYLFELMNTLNTHQGLYEKLKCSLQQTPTLKDTD PEAYTVGRVFLQDFEKSGVNLESSKRNSFVKKSSESATLGRAFFNNSMNRPQRYLTISKQ RLAGSDPYFVRSLSKNDKNFIMIPTVGYEGTQALISVANPDVRKEIYMEGHKGTVEEVEL LNSYLRSKAEVAKLVGKSSFADLQLIDKMANAPKHVVEFLENLSLKNSSVLKKILNNLAL MKKKELNLNFLPSFDVWDREYYTARYKQSLINQKPSLNPSITNYRRFFSVGTVIQGLSRL FSSLYGLRFVPADISPGEVWHPDVNKVNVYNENDHVMGVIYFDLFARTGKTDGAAHFTIR SSRELDLTSFDDSISLGFDDATNIRVKDNKRYQIPVISLLCNFVRSSGMDPTFLDLWDVK TLFHEMGHAMHSILGHTKYQNLAGTRCATDFVELPSIIMEFFMSNPAVLPLYARYEGTEI PLPVQVLNHHNMVENSSAPLDLQSQICMAMVDQLFHSKVVLDPSFNSIDEVTNVTRKFSG FESAPPAAWYLQFSHLYGYSATYYSYIFDTVLASLIFSKLFAGNPLSREAGEKFRKAILR WGGSRSPWECVAEALEQPILATGGEEAMRRIGSEGIKATSTF

  • title: metal binding site
  • coordinates: H544,H548,E573
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC1F3.10c659 STRKFSGFES0.993unspSPAC1F3.10c659 STRKFSGFES0.993unspSPAC1F3.10c659 STRKFSGFES0.993unspSPAC1F3.10c73 SNHFLSDKDT0.998unspSPAC1F3.10c527 SFVRSSGMDP0.993unsp

SPAC1F3.10c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India