SPAC23G3.08c | ubiquitin C-terminal hydrolase Ubp7

_IDPredictionOTHERSPmTPCS_Position
SPAC23G3.08cOTHER0.9999870.0000110.000001
No Results

  • Fasta :-

    >SPAC23G3.08c MPHSNTLIVPSTNPFDDPSSIKNGLNNLTSSELVNQMKKESLAASVKTPSTPPKECSHLK KGVKLSHLKGNARALRDPSKHLCFICTTEKIKREDYELTLCANCGYLFCCNHESDHSRKH FEKNKKHCVFVNIITLKCHCYSCDADIVIFDKKNLVVRDVQQFICSNLVSSLTKAPNVLK SNSSHFKKEKKSKHSSGKSSKKYKVISPGLKNLGATCFFNSTLQVLCACEALHDVISPFQ YSHSSVIVRKLTKSPESSLLSAFIKFLETFYKSDGTISVYRPTTFFGEFRRLHPQFSESV QQDAHELLRLLLDDLISEEFRVLRFNLNSVSRSLQLSPCLTDDEQLSKSLTSFKQVNVTD ASLSPNSHNTSDNEQNNEDYVSVSSLVGSETEDITYSKELSQSSDSSQHQHDSFLPANSS PLAASSTKSLPSSELLDSSSDKGQQVFKGQHEVAGTNSFEDPNSHFNVSNSSNHEEASPK KEVLKSPQFQRRSLDILRLGELSSDDMMLDKATMDEFSSSLVIKSIFTGRLTSVVMCQSC NEITNTPEPIQDLSIPIHYPSSRVSRRHRFHRALRSRFSRSPKKSSVKIVVDNANDDTDQ APTTNSSSLNENLLGGHASENDKSLKQSPFQKLTRRLSDLSVNSSGQISKQDFDNSNSIF SESSLSSPIIEEPKTLIDCLKNFTHVEELSGENMFACENCCNQPNEVGSPAKGGLTSDND KYSFNNSVYRNAYKRMLLDDPLPPVFIIHLKRFFQEISHDGYANPKKISDFIEFEQELDL NEFVMPHLRASSSFRYRLFGVIVHSGTLNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAG IPERRWLYISDNIVRESSWDEVSKVEAYMLFYERV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/711 Sequence name : 711 Sequence length : 875 VALUES OF COMPUTED PARAMETERS Coef20 : 3.232 CoefTot : -0.920 ChDiff : -3 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.335 1.447 0.322 0.485 MesoH : -0.227 0.394 -0.282 0.209 MuHd_075 : 12.533 3.605 3.085 1.193 MuHd_095 : 21.363 14.249 5.768 3.275 MuHd_100 : 25.243 16.223 6.816 4.064 MuHd_105 : 24.515 14.493 6.543 4.121 Hmax_075 : 5.250 2.567 -1.536 2.800 Hmax_095 : 9.000 5.600 -0.489 3.060 Hmax_100 : 14.000 9.800 1.468 4.100 Hmax_105 : 12.075 7.600 0.890 3.693 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9866 0.0134 DFMC : 0.9755 0.0245
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 875 SPAC23G3.08c MPHSNTLIVPSTNPFDDPSSIKNGLNNLTSSELVNQMKKESLAASVKTPSTPPKECSHLKKGVKLSHLKGNARALRDPSK 80 HLCFICTTEKIKREDYELTLCANCGYLFCCNHESDHSRKHFEKNKKHCVFVNIITLKCHCYSCDADIVIFDKKNLVVRDV 160 QQFICSNLVSSLTKAPNVLKSNSSHFKKEKKSKHSSGKSSKKYKVISPGLKNLGATCFFNSTLQVLCACEALHDVISPFQ 240 YSHSSVIVRKLTKSPESSLLSAFIKFLETFYKSDGTISVYRPTTFFGEFRRLHPQFSESVQQDAHELLRLLLDDLISEEF 320 RVLRFNLNSVSRSLQLSPCLTDDEQLSKSLTSFKQVNVTDASLSPNSHNTSDNEQNNEDYVSVSSLVGSETEDITYSKEL 400 SQSSDSSQHQHDSFLPANSSPLAASSTKSLPSSELLDSSSDKGQQVFKGQHEVAGTNSFEDPNSHFNVSNSSNHEEASPK 480 KEVLKSPQFQRRSLDILRLGELSSDDMMLDKATMDEFSSSLVIKSIFTGRLTSVVMCQSCNEITNTPEPIQDLSIPIHYP 560 SSRVSRRHRFHRALRSRFSRSPKKSSVKIVVDNANDDTDQAPTTNSSSLNENLLGGHASENDKSLKQSPFQKLTRRLSDL 640 SVNSSGQISKQDFDNSNSIFSESSLSSPIIEEPKTLIDCLKNFTHVEELSGENMFACENCCNQPNEVGSPAKGGLTSDND 720 KYSFNNSVYRNAYKRMLLDDPLPPVFIIHLKRFFQEISHDGYANPKKISDFIEFEQELDLNEFVMPHLRASSSFRYRLFG 800 VIVHSGTLNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAGIPERRWLYISDNIVRESSWDEVSKVEAYMLFYERV 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................P............................................................ 640 ................................................................................ 720 ................................................................................ 800 ........................................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPAC23G3.08c 22 DDPSSIK|NG 0.057 . SPAC23G3.08c 38 ELVNQMK|KE 0.063 . SPAC23G3.08c 39 LVNQMKK|ES 0.084 . SPAC23G3.08c 47 SLAASVK|TP 0.063 . SPAC23G3.08c 54 TPSTPPK|EC 0.101 . SPAC23G3.08c 60 KECSHLK|KG 0.058 . SPAC23G3.08c 61 ECSHLKK|GV 0.182 . SPAC23G3.08c 64 HLKKGVK|LS 0.061 . SPAC23G3.08c 69 VKLSHLK|GN 0.067 . SPAC23G3.08c 73 HLKGNAR|AL 0.096 . SPAC23G3.08c 76 GNARALR|DP 0.459 . SPAC23G3.08c 80 ALRDPSK|HL 0.078 . SPAC23G3.08c 90 FICTTEK|IK 0.054 . SPAC23G3.08c 92 CTTEKIK|RE 0.059 . SPAC23G3.08c 93 TTEKIKR|ED 0.143 . SPAC23G3.08c 118 HESDHSR|KH 0.118 . SPAC23G3.08c 119 ESDHSRK|HF 0.116 . SPAC23G3.08c 123 SRKHFEK|NK 0.074 . SPAC23G3.08c 125 KHFEKNK|KH 0.063 . SPAC23G3.08c 126 HFEKNKK|HC 0.086 . SPAC23G3.08c 137 VNIITLK|CH 0.060 . SPAC23G3.08c 152 DIVIFDK|KN 0.060 . SPAC23G3.08c 153 IVIFDKK|NL 0.083 . SPAC23G3.08c 158 KKNLVVR|DV 0.220 . SPAC23G3.08c 174 LVSSLTK|AP 0.064 . SPAC23G3.08c 180 KAPNVLK|SN 0.080 . SPAC23G3.08c 187 SNSSHFK|KE 0.084 . SPAC23G3.08c 188 NSSHFKK|EK 0.148 . SPAC23G3.08c 190 SHFKKEK|KS 0.066 . SPAC23G3.08c 191 HFKKEKK|SK 0.214 . SPAC23G3.08c 193 KKEKKSK|HS 0.081 . SPAC23G3.08c 198 SKHSSGK|SS 0.116 . SPAC23G3.08c 201 SSGKSSK|KY 0.071 . SPAC23G3.08c 202 SGKSSKK|YK 0.113 . SPAC23G3.08c 204 KSSKKYK|VI 0.161 . SPAC23G3.08c 211 VISPGLK|NL 0.066 . SPAC23G3.08c 249 HSSVIVR|KL 0.149 . SPAC23G3.08c 250 SSVIVRK|LT 0.092 . SPAC23G3.08c 253 IVRKLTK|SP 0.086 . SPAC23G3.08c 265 LLSAFIK|FL 0.093 . SPAC23G3.08c 272 FLETFYK|SD 0.090 . SPAC23G3.08c 281 GTISVYR|PT 0.088 . SPAC23G3.08c 290 TFFGEFR|RL 0.111 . SPAC23G3.08c 291 FFGEFRR|LH 0.097 . SPAC23G3.08c 309 DAHELLR|LL 0.082 . SPAC23G3.08c 321 LISEEFR|VL 0.099 . SPAC23G3.08c 324 EEFRVLR|FN 0.198 . SPAC23G3.08c 332 NLNSVSR|SL 0.123 . SPAC23G3.08c 348 DDEQLSK|SL 0.067 . SPAC23G3.08c 354 KSLTSFK|QV 0.076 . SPAC23G3.08c 398 EDITYSK|EL 0.069 . SPAC23G3.08c 428 LAASSTK|SL 0.089 . SPAC23G3.08c 442 LDSSSDK|GQ 0.076 . SPAC23G3.08c 448 KGQQVFK|GQ 0.080 . SPAC23G3.08c 480 HEEASPK|KE 0.059 . SPAC23G3.08c 481 EEASPKK|EV 0.135 . SPAC23G3.08c 485 PKKEVLK|SP 0.083 . SPAC23G3.08c 491 KSPQFQR|RS 0.100 . SPAC23G3.08c 492 SPQFQRR|SL 0.463 . SPAC23G3.08c 498 RSLDILR|LG 0.070 . SPAC23G3.08c 511 DDMMLDK|AT 0.075 . SPAC23G3.08c 524 SSSLVIK|SI 0.189 . SPAC23G3.08c 530 KSIFTGR|LT 0.122 . SPAC23G3.08c 563 IHYPSSR|VS 0.092 . SPAC23G3.08c 566 PSSRVSR|RH 0.267 . SPAC23G3.08c 567 SSRVSRR|HR 0.160 . SPAC23G3.08c 569 RVSRRHR|FH 0.407 . SPAC23G3.08c 572 RRHRFHR|AL 0.464 . SPAC23G3.08c 575 RFHRALR|SR 0.234 . SPAC23G3.08c 577 HRALRSR|FS 0.112 . SPAC23G3.08c 580 LRSRFSR|SP 0.608 *ProP* SPAC23G3.08c 583 RFSRSPK|KS 0.222 . SPAC23G3.08c 584 FSRSPKK|SS 0.165 . SPAC23G3.08c 588 PKKSSVK|IV 0.075 . SPAC23G3.08c 623 HASENDK|SL 0.105 . SPAC23G3.08c 626 ENDKSLK|QS 0.061 . SPAC23G3.08c 632 KQSPFQK|LT 0.069 . SPAC23G3.08c 635 PFQKLTR|RL 0.088 . SPAC23G3.08c 636 FQKLTRR|LS 0.119 . SPAC23G3.08c 650 SSGQISK|QD 0.067 . SPAC23G3.08c 674 PIIEEPK|TL 0.070 . SPAC23G3.08c 681 TLIDCLK|NF 0.076 . SPAC23G3.08c 712 EVGSPAK|GG 0.065 . SPAC23G3.08c 721 LTSDNDK|YS 0.066 . SPAC23G3.08c 730 FNNSVYR|NA 0.107 . SPAC23G3.08c 734 VYRNAYK|RM 0.056 . SPAC23G3.08c 735 YRNAYKR|ML 0.195 . SPAC23G3.08c 751 VFIIHLK|RF 0.065 . SPAC23G3.08c 752 FIIHLKR|FF 0.217 . SPAC23G3.08c 766 DGYANPK|KI 0.072 . SPAC23G3.08c 767 GYANPKK|IS 0.146 . SPAC23G3.08c 789 FVMPHLR|AS 0.082 . SPAC23G3.08c 795 RASSSFR|YR 0.117 . SPAC23G3.08c 797 SSSFRYR|LF 0.181 . SPAC23G3.08c 821 AYVLSHK|FL 0.066 . SPAC23G3.08c 833 APSTNSK|DF 0.081 . SPAC23G3.08c 836 TNSKDFR|SE 0.206 . SPAC23G3.08c 844 EAGIPER|RW 0.074 . SPAC23G3.08c 845 AGIPERR|WL 0.125 . SPAC23G3.08c 855 ISDNIVR|ES 0.097 . SPAC23G3.08c 864 SWDEVSK|VE 0.061 . SPAC23G3.08c 874 YMLFYER|V- 0.071 . ____________________________^_________________

  • Fasta :-

    >SPAC23G3.08c TCGAGCTTGTAGCAGATAAACTTATACCCAACCTCTATTGTAATTCCAAGATTTCCATAA GCATAAATAGTACACTGATTCAATTGTGCGTGTAAACACTTGTTAAAAGAAATCAGTTCT TAATAGACTTGTCCATTGAAGTCTGATTAAAGGTTCAGGATAATCTTAACTATCGTCGGA CAAAGTCTTCAAAACATCTTCAAATGTTTTTACATTTGTAAGAATATTGTTAGTGAAACA TTCCTTTACCGGAAGCAACGCTTATAATTGTTGATTGTATTTTGATTGTTAAAGGCGACA ATTGCAAATCCGCTAAATAAAAATAGCCTTTTTGCTAATTTTTGTGGGAGCAAATTCTAT TTATTTCTGAAACTCATATTTTCTTTCCTATCTTTTGAATTTTTTGGCCCGTTCTGTTCG AACTTGCGGCCCATTGTTGTTGTTTCTCTAGAAAAAAAACAGGTTTCCTTCAGTATCCGC ATTTCATTCTTTATTTTACTTTTTTCCTTGCATTAATTTATCCATTGATTTCCTCCTTGT TGATCGTCTTTTTTTTGTCCCGTTTTCATATATGCATTATAATGCCTCATTCTAACACTT TAATTGTGCCATCCACAAACCCATTTGATGATCCATCATCCATAAAGAATGGGCTTAACA ATCTGACAAGTAGTGAATTAGTTAACCAAATGAAAAAGGAATCATTAGCTGCTAGTGTTA AAACCCCTTCAACACCACCCAAAGAATGTTCTCATTTGAAAAAAGGTGTTAAGCTGTCTC ATCTCAAAGGTAATGCTCGTGCTCTTCGGGATCCGAGCAAACATTTGTGCTTTATATGCA CCACGGAGAAAATAAAAAGGGAGGATTATGAACTAACACTTTGTGCTAATTGTGGCTACC TTTTCTGCTGCAATCATGAGTCTGATCATAGCCGAAAACATTTTGAAAAGAATAAGAAGC ATTGCGTTTTTGTCAACATTATAACCTTGAAATGTCACTGTTACAGTTGTGATGCAGATA TAGTTATTTTTGATAAAAAGAATTTAGTTGTGCGGGACGTTCAACAATTTATTTGCTCTA ACTTGGTTTCATCGTTAACTAAGGCCCCCAACGTTTTAAAATCCAATTCGTCACACTTTA AAAAGGAAAAAAAGAGTAAGCATTCTTCTGGCAAAAGCTCGAAGAAATATAAAGTTATCA GTCCTGGTTTAAAAAATTTGGGTGCCACATGCTTTTTTAATTCGACTTTACAAGTCCTAT GTGCTTGTGAGGCTTTACACGATGTGATTAGCCCGTTCCAATATTCCCACTCCTCAGTTA TAGTGCGAAAGTTAACGAAATCTCCTGAATCTTCTCTTTTATCTGCATTCATTAAATTTT TGGAGACCTTTTATAAATCAGATGGCACTATCTCCGTATATCGTCCTACCACTTTTTTCG GAGAATTTCGAAGACTACATCCCCAGTTTTCCGAAAGCGTCCAGCAGGATGCTCACGAGC TTTTAAGGCTGTTATTGGACGATCTCATTTCTGAAGAATTTCGTGTACTGAGATTTAACC TTAATAGTGTATCACGTTCTCTTCAACTTAGTCCATGTTTGACAGATGATGAACAGCTTT CTAAATCGTTAACTTCGTTTAAACAAGTGAATGTTACAGATGCTTCTTTGTCGCCAAATT CACACAATACAAGTGATAACGAGCAGAACAACGAAGATTATGTTAGCGTTTCTTCATTAG TGGGTTCTGAGACCGAAGATATTACTTATTCGAAGGAGTTGTCGCAATCATCTGACTCTT CACAGCATCAGCATGACAGTTTCTTGCCTGCTAATTCATCGCCATTAGCGGCCTCGTCTA CAAAATCCCTTCCATCGTCAGAACTTCTCGATTCCAGTTCAGACAAGGGACAACAAGTTT TTAAGGGTCAACATGAGGTCGCTGGTACCAATTCTTTTGAAGATCCTAATTCTCATTTCA ATGTATCTAATAGTTCTAATCATGAGGAGGCTAGTCCTAAAAAAGAAGTTTTAAAATCTC CTCAATTTCAAAGGCGTTCACTAGACATACTACGGCTTGGTGAACTTTCTTCAGATGATA TGATGCTTGATAAAGCTACTATGGATGAATTTTCTTCAAGCCTGGTGATCAAGTCAATTT TTACAGGCCGTTTAACGAGCGTTGTGATGTGCCAAAGTTGTAATGAAATTACTAACACTC CTGAACCTATTCAAGATTTATCCATACCTATTCATTACCCGTCTAGCCGCGTAAGTCGTC GTCATCGATTCCATCGTGCTCTCCGTTCACGATTTAGTCGTTCACCAAAAAAATCGTCTG TAAAGATAGTTGTTGACAATGCTAACGACGACACTGATCAAGCCCCGACTACTAATTCCT CTTCGTTAAATGAAAATTTACTTGGTGGGCATGCTAGTGAAAATGACAAGAGTTTGAAAC AGTCTCCATTTCAAAAACTGACTCGAAGATTAAGTGATCTCTCTGTCAATTCTAGCGGGC AAATTTCGAAACAAGATTTTGATAATAGTAATTCAATTTTCTCAGAATCTTCACTATCAA GCCCAATAATAGAGGAGCCTAAGACACTTATTGATTGTCTCAAAAACTTTACTCATGTTG AGGAGTTAAGTGGTGAAAACATGTTTGCCTGCGAGAATTGCTGTAATCAACCTAACGAAG TTGGCTCTCCAGCTAAGGGAGGATTGACGTCGGATAACGATAAATATTCGTTTAATAACA GTGTTTATAGAAATGCTTACAAGCGGATGTTATTAGATGACCCTTTACCTCCTGTTTTTA TTATCCATTTGAAGCGTTTTTTCCAGGAGATTTCCCACGATGGTTACGCCAATCCCAAAA AAATTTCCGATTTCATTGAGTTTGAACAAGAATTAGATTTAAACGAGTTCGTTATGCCAC ACCTACGTGCTTCAAGTAGTTTTAGATATCGACTTTTCGGGGTCATTGTGCACAGTGGCA CCCTGAATTATGGTCATTATGTTGCTTACGTATTGTCTCATAAATTCTTAGACCTCAGTG CCCCTTCTACGAATTCTAAGGATTTCCGTTCTGAAGCTGGCATACCCGAGAGACGATGGC TTTACATTAGTGACAATATTGTACGCGAATCATCCTGGGACGAGGTTTCAAAAGTCGAAG CGTATATGCTATTCTATGAACGTGTTTAGACTTCTATTGCTTTAAATCCTCATTTTAGCT TAACAATATTTTTCAATACCCCTGGTTTTTATCTTTAAAATGCAAAGTATTCATTTTGAA ATTTACGATTGGCCCAAAATGACTTATTCAACTCAATCTATCTTCACCTTAATCGAATTT CAAAATTACTTTGTCATTTCACCTCATAACTAGATACTGAATTTTGGACGAAACCATAAT TATTCAAACACATTCTTTTGATGTACCTCAATTAAAAAAATACCATTTTACTTAATTAAG CAAATGGGATAATTTATTTTACGTTATCAATAGTCTATATAATTGCAAATTTATAGAAAA ATCTAAATTTACTTATTTTTTATACGCTAATA
  • Download Fasta

  • Fasta :-

    MPHSNTLIVPSTNPFDDPSSIKNGLNNLTSSELVNQMKKESLAASVKTPSTPPKECSHLK KGVKLSHLKGNARALRDPSKHLCFICTTEKIKREDYELTLCANCGYLFCCNHESDHSRKH FEKNKKHCVFVNIITLKCHCYSCDADIVIFDKKNLVVRDVQQFICSNLVSSLTKAPNVLK SNSSHFKKEKKSKHSSGKSSKKYKVISPGLKNLGATCFFNSTLQVLCACEALHDVISPFQ YSHSSVIVRKLTKSPESSLLSAFIKFLETFYKSDGTISVYRPTTFFGEFRRLHPQFSESV QQDAHELLRLLLDDLISEEFRVLRFNLNSVSRSLQLSPCLTDDEQLSKSLTSFKQVNVTD ASLSPNSHNTSDNEQNNEDYVSVSSLVGSETEDITYSKELSQSSDSSQHQHDSFLPANSS PLAASSTKSLPSSELLDSSSDKGQQVFKGQHEVAGTNSFEDPNSHFNVSNSSNHEEASPK KEVLKSPQFQRRSLDILRLGELSSDDMMLDKATMDEFSSSLVIKSIFTGRLTSVVMCQSC NEITNTPEPIQDLSIPIHYPSSRVSRRHRFHRALRSRFSRSPKKSSVKIVVDNANDDTDQ APTTNSSSLNENLLGGHASENDKSLKQSPFQKLTRRLSDLSVNSSGQISKQDFDNSNSIF SESSLSSPIIEEPKTLIDCLKNFTHVEELSGENMFACENCCNQPNEVGSPAKGGLTSDND KYSFNNSVYRNAYKRMLLDDPLPPVFIIHLKRFFQEISHDGYANPKKISDFIEFEQELDL NEFVMPHLRASSSFRYRLFGVIVHSGTLNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAG IPERRWLYISDNIVRESSWDEVSKVEAYMLFYERV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC23G3.08c196 SSKHSSGKSS0.996unspSPAC23G3.08c196 SSKHSSGKSS0.996unspSPAC23G3.08c196 SSKHSSGKSS0.996unspSPAC23G3.08c254 SKLTKSPESS0.997unspSPAC23G3.08c337 SSLQLSPCLT0.991unspSPAC23G3.08c380 YNNEDYVSVS0.992unspSPAC23G3.08c478 SHEEASPKKE0.992unspSPAC23G3.08c565 SSSRVSRRHR0.996unspSPAC23G3.08c581 SRFSRSPKKS0.997unspSPAC23G3.08c624 SENDKSLKQS0.991unspSPAC23G3.08c649 SSGQISKQDF0.992unspSPAC23G3.08c857 SIVRESSWDE0.993unspSPAC23G3.08c858 SVRESSWDEV0.996unspSPAC23G3.08c20 SDDPSSIKNG0.995unspSPAC23G3.08c195 SKSKHSSGKS0.993unsp

SPAC23G3.08c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India