SPAC24C9.08 | vacuolar carboxypeptidase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC24C9.08OTHER0.9999790.0000210.000000
No Results

  • Fasta :-

    >SPAC24C9.08 MSTSNDPVVSSHDPIKQEKEQETDLEAQVEHKKRNERGNAFVGFLILIFVYYLLRGGSND NDKQEMSHSPGSCMDSESAAVSTSAKCYIPPVLTPAKEPKLGDDVSGIDYIRSPEFFNDS LVRFQELLRIPTVCYDDMGDVGDDDRFDIFAVFQDKVRELYPNIFKKLKVEYVNTYGLLI TLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATYHNGHVYSRGAADDKNSVVAI LEALEILAISDYKPEQTVIASFGFDEEVSGYRGALPLAHKLYERYGKDGVALILDEGGFT INLFGTLFATVCVAEKGYMDVHLKLKTPGGHASIPPPHTNIGLMSKLVTQIEEPFGGELT FENPFYTTLQCFAENSADMDDNLRQLIKSGDTEKMTDLFSKSRLYRYFFETSIAVDVING GVKVNALPEETTLAVNHRVDASKGLKQVYDRYGGLLEEFGHEYHVNVTLFNGETVVEYED AIGHIFASTAKTLEPSPVSPYDESSDAYKKLAGAIRYTFGDGTSVTPALMPANTDTRHYW NLTSNIYRWTPVSTNSTSKNSFNGHTINENMRYDAHMDSIEFFYNFILVSDSGEEA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/870 Sequence name : 870 Sequence length : 596 VALUES OF COMPUTED PARAMETERS Coef20 : 3.025 CoefTot : 0.090 ChDiff : -34 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.829 2.112 0.315 0.842 MesoH : -0.154 0.418 -0.324 0.298 MuHd_075 : 12.105 11.174 5.092 2.950 MuHd_095 : 22.720 13.442 6.377 3.664 MuHd_100 : 24.052 15.293 6.132 4.474 MuHd_105 : 22.719 13.967 5.231 4.402 Hmax_075 : 5.483 5.483 -0.852 2.683 Hmax_095 : 4.900 1.900 -1.269 1.810 Hmax_100 : 2.500 4.200 -1.303 2.160 Hmax_105 : 4.500 7.300 -1.535 2.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9819 0.0181 DFMC : 0.9819 0.0181
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 596 SPAC24C9.08 MSTSNDPVVSSHDPIKQEKEQETDLEAQVEHKKRNERGNAFVGFLILIFVYYLLRGGSNDNDKQEMSHSPGSCMDSESAA 80 VSTSAKCYIPPVLTPAKEPKLGDDVSGIDYIRSPEFFNDSLVRFQELLRIPTVCYDDMGDVGDDDRFDIFAVFQDKVREL 160 YPNIFKKLKVEYVNTYGLLITLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATYHNGHVYSRGAADDKNSVVAI 240 LEALEILAISDYKPEQTVIASFGFDEEVSGYRGALPLAHKLYERYGKDGVALILDEGGFTINLFGTLFATVCVAEKGYMD 320 VHLKLKTPGGHASIPPPHTNIGLMSKLVTQIEEPFGGELTFENPFYTTLQCFAENSADMDDNLRQLIKSGDTEKMTDLFS 400 KSRLYRYFFETSIAVDVINGGVKVNALPEETTLAVNHRVDASKGLKQVYDRYGGLLEEFGHEYHVNVTLFNGETVVEYED 480 AIGHIFASTAKTLEPSPVSPYDESSDAYKKLAGAIRYTFGDGTSVTPALMPANTDTRHYWNLTSNIYRWTPVSTNSTSKN 560 SFNGHTINENMRYDAHMDSIEFFYNFILVSDSGEEA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC24C9.08 16 SSHDPIK|QE 0.083 . SPAC24C9.08 19 DPIKQEK|EQ 0.073 . SPAC24C9.08 32 EAQVEHK|KR 0.064 . SPAC24C9.08 33 AQVEHKK|RN 0.095 . SPAC24C9.08 34 QVEHKKR|NE 0.180 . SPAC24C9.08 37 HKKRNER|GN 0.258 . SPAC24C9.08 55 FVYYLLR|GG 0.071 . SPAC24C9.08 63 GSNDNDK|QE 0.067 . SPAC24C9.08 86 AVSTSAK|CY 0.076 . SPAC24C9.08 97 PVLTPAK|EP 0.057 . SPAC24C9.08 100 TPAKEPK|LG 0.083 . SPAC24C9.08 112 SGIDYIR|SP 0.101 . SPAC24C9.08 123 FNDSLVR|FQ 0.079 . SPAC24C9.08 129 RFQELLR|IP 0.071 . SPAC24C9.08 146 DVGDDDR|FD 0.081 . SPAC24C9.08 156 FAVFQDK|VR 0.057 . SPAC24C9.08 158 VFQDKVR|EL 0.088 . SPAC24C9.08 166 LYPNIFK|KL 0.056 . SPAC24C9.08 167 YPNIFKK|LK 0.132 . SPAC24C9.08 169 NIFKKLK|VE 0.059 . SPAC24C9.08 187 TLEGSNK|DL 0.073 . SPAC24C9.08 190 GSNKDLK|PL 0.067 . SPAC24C9.08 210 NQASLDR|WY 0.096 . SPAC24C9.08 228 NGHVYSR|GA 0.121 . SPAC24C9.08 234 RGAADDK|NS 0.060 . SPAC24C9.08 253 LAISDYK|PE 0.066 . SPAC24C9.08 272 EEVSGYR|GA 0.079 . SPAC24C9.08 280 ALPLAHK|LY 0.062 . SPAC24C9.08 284 AHKLYER|YG 0.089 . SPAC24C9.08 287 LYERYGK|DG 0.139 . SPAC24C9.08 316 TVCVAEK|GY 0.066 . SPAC24C9.08 324 YMDVHLK|LK 0.068 . SPAC24C9.08 326 DVHLKLK|TP 0.063 . SPAC24C9.08 346 NIGLMSK|LV 0.084 . SPAC24C9.08 384 DMDDNLR|QL 0.087 . SPAC24C9.08 388 NLRQLIK|SG 0.092 . SPAC24C9.08 394 KSGDTEK|MT 0.063 . SPAC24C9.08 401 MTDLFSK|SR 0.067 . SPAC24C9.08 403 DLFSKSR|LY 0.082 . SPAC24C9.08 406 SKSRLYR|YF 0.364 . SPAC24C9.08 423 VINGGVK|VN 0.058 . SPAC24C9.08 438 TLAVNHR|VD 0.091 . SPAC24C9.08 443 HRVDASK|GL 0.085 . SPAC24C9.08 446 DASKGLK|QV 0.079 . SPAC24C9.08 451 LKQVYDR|YG 0.106 . SPAC24C9.08 491 IFASTAK|TL 0.077 . SPAC24C9.08 509 ESSDAYK|KL 0.085 . SPAC24C9.08 510 SSDAYKK|LA 0.163 . SPAC24C9.08 516 KLAGAIR|YT 0.126 . SPAC24C9.08 537 PANTDTR|HY 0.085 . SPAC24C9.08 548 LTSNIYR|WT 0.116 . SPAC24C9.08 559 STNSTSK|NS 0.067 . SPAC24C9.08 572 TINENMR|YD 0.099 . ____________________________^_________________

  • Fasta :-

    >SPAC24C9.08 CGACCGCTTATCAGCACTACTTTGATCTACACTATATAAGAGAGGACAAGCGACATTAGG GATTTGACAATTCCAGTACTGGCTATAGTAGAAGTGTTGAATTGCAATCGACCTTTTCTT CGGTCAGGTGTCATCACTCACTCATCATACTACCTTTAGAAATCTGCTTTTAAGCTTTTG AACCAATTGCTTAAATTCGCTTTTCTCTTTAATCTCATCTCCTTTTATTTTTTATTTTTG GAATTACGGTGACATTTTTGGTGCTTTAAATCCCTCATTATTGCTTATTCATCCATCTCT GAAAATATATAAAAACAGTTGCTAATTTCTAAAACTACGACAATGTCCACTTCTAACGAC CCAGTTGTTTCGTCTCATGACCCTATAAAGCAAGAGAAGGAACAGGAGACCGATTTGGAG GCGCAAGTGGAGCATAAAAAAAGAAACGAACGTGGTAATGCTTTTGTTGGATTTTTGATC TTGATTTTCGTTTATTATTTGTTACGCGGCGGTTCCAATGACAATGATAAACAAGAAATG TCTCATTCACCTGGCAGTTGTATGGACTCTGAGTCGGCGGCTGTCTCAACATCTGCGAAA TGCTATATTCCTCCAGTCTTGACTCCTGCAAAGGAGCCAAAACTCGGAGATGATGTAAGT GGTATCGATTATATTAGGAGCCCTGAATTCTTTAATGACAGCCTTGTTCGCTTCCAAGAA TTGTTGCGCATTCCTACCGTTTGTTACGATGATATGGGCGATGTTGGAGACGACGATCGT TTTGATATATTTGCCGTTTTCCAGGACAAAGTTCGCGAGCTCTACCCTAACATTTTCAAG AAGCTTAAAGTAGAGTATGTAAACACTTATGGTCTTTTAATTACGCTCGAAGGTTCCAAT AAGGATTTGAAGCCTCTTGTTCTTATGGGTCATCAAGACGTAGTCCCTGTTAATCAAGCC AGCCTTGATAGATGGTACTTCCCTCCATTCAGTGCAACCTACCATAATGGCCACGTCTAT TCAAGGGGAGCCGCTGATGACAAAAATTCTGTAGTCGCTATTCTTGAAGCTCTTGAAATT TTGGCTATCTCCGATTACAAACCCGAACAAACTGTTATTGCTTCTTTCGGATTTGATGAA GAGGTATCTGGTTATCGTGGTGCCTTACCCTTGGCACACAAGTTGTACGAAAGATATGGT AAGGATGGTGTCGCTTTAATTCTAGATGAAGGTGGGTTTACCATCAATTTATTTGGTACA CTTTTTGCTACTGTTTGTGTTGCTGAAAAGGGTTATATGGATGTGCATTTGAAATTGAAG ACTCCCGGTGGTCATGCCTCTATTCCTCCTCCTCATACAAACATTGGTTTGATGAGTAAG CTAGTCACCCAAATTGAAGAACCATTTGGTGGAGAACTTACCTTCGAAAACCCATTTTAT ACTACTTTGCAGTGCTTTGCAGAAAACAGTGCTGATATGGATGACAACTTACGTCAATTG ATCAAGAGTGGAGACACTGAGAAGATGACTGATTTGTTTTCGAAAAGTAGATTATATAGA TACTTTTTTGAAACATCCATTGCTGTCGATGTTATCAATGGTGGTGTTAAGGTGAATGCC CTTCCAGAAGAAACAACCTTGGCTGTCAATCATCGTGTTGATGCTTCAAAGGGTCTTAAG CAAGTTTATGACAGATATGGTGGTTTATTGGAAGAATTTGGTCACGAGTATCATGTTAAT GTTACACTTTTTAATGGCGAAACCGTTGTCGAATACGAAGATGCCATAGGCCATATTTTT GCTTCTACTGCTAAGACTTTAGAGCCATCACCTGTCTCCCCCTATGATGAGAGCTCCGAT GCTTACAAGAAGCTTGCTGGCGCTATCAGATATACTTTTGGGGATGGCACCTCAGTTACT CCAGCTCTTATGCCTGCCAACACCGATACTCGTCATTATTGGAACTTGACTTCTAATATT TACCGCTGGACCCCTGTTTCTACTAATTCTACGTCTAAGAATTCTTTTAATGGTCATACT ATTAATGAGAATATGCGTTACGACGCTCATATGGACAGTATTGAGTTTTTCTACAACTTT ATCCTTGTATCTGATTCCGGTGAAGAAGCGTAAGCTCCTTTTTTGGATTTGCTTAGATAG TTAACACTATCACTTATTGACTTTTTATCAATTTCAGCGCTAGAACAAGCTCATAATTAT TAATATTATCTAATCAATGTTTATGTAATCGTCCTTTG
  • Download Fasta

  • Fasta :-

    MSTSNDPVVSSHDPIKQEKEQETDLEAQVEHKKRNERGNAFVGFLILIFVYYLLRGGSND NDKQEMSHSPGSCMDSESAAVSTSAKCYIPPVLTPAKEPKLGDDVSGIDYIRSPEFFNDS LVRFQELLRIPTVCYDDMGDVGDDDRFDIFAVFQDKVRELYPNIFKKLKVEYVNTYGLLI TLEGSNKDLKPLVLMGHQDVVPVNQASLDRWYFPPFSATYHNGHVYSRGAADDKNSVVAI LEALEILAISDYKPEQTVIASFGFDEEVSGYRGALPLAHKLYERYGKDGVALILDEGGFT INLFGTLFATVCVAEKGYMDVHLKLKTPGGHASIPPPHTNIGLMSKLVTQIEEPFGGELT FENPFYTTLQCFAENSADMDDNLRQLIKSGDTEKMTDLFSKSRLYRYFFETSIAVDVING GVKVNALPEETTLAVNHRVDASKGLKQVYDRYGGLLEEFGHEYHVNVTLFNGETVVEYED AIGHIFASTAKTLEPSPVSPYDESSDAYKKLAGAIRYTFGDGTSVTPALMPANTDTRHYW NLTSNIYRWTPVSTNSTSKNSFNGHTINENMRYDAHMDSIEFFYNFILVSDSGEEA

  • title: metal binding site
  • coordinates: H197,D232,E266,E267,D295,H565
IDSitePositionGscoreIscore
SPAC24C9.08T30.5670.120
IDSitePositionGscoreIscore
SPAC24C9.08T30.5670.120
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC24C9.08499 SPSPVSPYDE0.998unspSPAC24C9.08499 SPSPVSPYDE0.998unspSPAC24C9.08499 SPSPVSPYDE0.998unspSPAC24C9.08592 SLVSDSGEEA0.997unspSPAC24C9.0872 SHSPGSCMDS0.995unspSPAC24C9.08185 STLEGSNKDL0.996unsp

SPAC24C9.08      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India