SPAC25G10.08 | translation initiation factor eIF3b (p84)

_IDPredictionOTHERSPmTPCS_Position
SPAC25G10.08OTHER0.9999560.0000340.000009
No Results

  • Fasta :-

    >SPAC25G10.08 MSEILIEEIKDQIVVKDEEIDVSELEVKLNVTKPVGYDTVVVIEGAPVVEEAKQQDFFRF LSSKVLAKIGKVKENGFYMPFEEKNGKKMSLGLVFADFENVDGADLCVQELDGKQILKNH TFVVRKLNQLEKAFSTPDEFSFEEREFKEREHLRSWLTDYYGRDQFISYYGNRVSVNWNR KSDVPEQIVDRENWTETYVQWSPMGTYLVSLHLRGIQLWGGESWGMCARFLHPYVKFVDF SPNEKYLVSWSYEPVRLPPIGHPARETMPFTDDDEGKHCFVWDIASGRILRSFKIPPQPE GSKDGKKVIWPIFKWSADDKYLARVTVGQSISVYETPSLALVDKKTIKIDGVQNFEWCPV SDALGRDSKEQLLAYWTPEITNQPARVALISIPSKSTIRTKNLFNVSDCKLYWQSNGDYL CVKVDRHTKTKKSTFSNLEIFRIREKNIPVEVVDLKDVVLNFAWEPKSDRFAIISANDQV LNSTNVKTNLSFYGFEQKKNTPSTFRHIITFDKKTCNSLFMAPKGRFMVAATLGSSTQYD LEFYDLDFDTEKKEPDALANVQQIGSAEHFGMTELEWDPSGRYVTTSSTIWRHKLENGYR LCDFRGTLLREEMIGEFKQFIWRPRPPSPLTKEDMKKIRKKLKDYNRLFDEEDIAEQSSA NRELAARRRQLISEWQKYRDEVIARVAEERAITGQPAITVPAEEEEIIQETVEEVISEEI EPVED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/462 Sequence name : 462 Sequence length : 725 VALUES OF COMPUTED PARAMETERS Coef20 : 3.205 CoefTot : 0.112 ChDiff : -18 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 1.018 -0.048 0.450 MesoH : -0.545 0.084 -0.464 0.178 MuHd_075 : 40.064 29.881 11.699 7.740 MuHd_095 : 26.652 14.367 6.473 3.695 MuHd_100 : 27.452 11.763 6.302 2.903 MuHd_105 : 24.036 9.101 5.552 2.499 Hmax_075 : 7.583 21.000 2.118 6.603 Hmax_095 : -1.662 11.637 -1.016 3.342 Hmax_100 : 0.100 9.100 -1.393 2.770 Hmax_105 : 0.200 9.100 -1.393 2.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8832 0.1168 DFMC : 0.8660 0.1340
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 725 SPAC25G10.08 MSEILIEEIKDQIVVKDEEIDVSELEVKLNVTKPVGYDTVVVIEGAPVVEEAKQQDFFRFLSSKVLAKIGKVKENGFYMP 80 FEEKNGKKMSLGLVFADFENVDGADLCVQELDGKQILKNHTFVVRKLNQLEKAFSTPDEFSFEEREFKEREHLRSWLTDY 160 YGRDQFISYYGNRVSVNWNRKSDVPEQIVDRENWTETYVQWSPMGTYLVSLHLRGIQLWGGESWGMCARFLHPYVKFVDF 240 SPNEKYLVSWSYEPVRLPPIGHPARETMPFTDDDEGKHCFVWDIASGRILRSFKIPPQPEGSKDGKKVIWPIFKWSADDK 320 YLARVTVGQSISVYETPSLALVDKKTIKIDGVQNFEWCPVSDALGRDSKEQLLAYWTPEITNQPARVALISIPSKSTIRT 400 KNLFNVSDCKLYWQSNGDYLCVKVDRHTKTKKSTFSNLEIFRIREKNIPVEVVDLKDVVLNFAWEPKSDRFAIISANDQV 480 LNSTNVKTNLSFYGFEQKKNTPSTFRHIITFDKKTCNSLFMAPKGRFMVAATLGSSTQYDLEFYDLDFDTEKKEPDALAN 560 VQQIGSAEHFGMTELEWDPSGRYVTTSSTIWRHKLENGYRLCDFRGTLLREEMIGEFKQFIWRPRPPSPLTKEDMKKIRK 640 KLKDYNRLFDEEDIAEQSSANRELAARRRQLISEWQKYRDEVIARVAEERAITGQPAITVPAEEEEIIQETVEEVISEEI 720 EPVED 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC25G10.08 10 ILIEEIK|DQ 0.069 . SPAC25G10.08 16 KDQIVVK|DE 0.080 . SPAC25G10.08 28 VSELEVK|LN 0.059 . SPAC25G10.08 33 VKLNVTK|PV 0.077 . SPAC25G10.08 53 PVVEEAK|QQ 0.059 . SPAC25G10.08 59 KQQDFFR|FL 0.149 . SPAC25G10.08 64 FRFLSSK|VL 0.071 . SPAC25G10.08 68 SSKVLAK|IG 0.075 . SPAC25G10.08 71 VLAKIGK|VK 0.073 . SPAC25G10.08 73 AKIGKVK|EN 0.080 . SPAC25G10.08 84 YMPFEEK|NG 0.053 . SPAC25G10.08 87 FEEKNGK|KM 0.064 . SPAC25G10.08 88 EEKNGKK|MS 0.089 . SPAC25G10.08 114 VQELDGK|QI 0.058 . SPAC25G10.08 118 DGKQILK|NH 0.057 . SPAC25G10.08 125 NHTFVVR|KL 0.103 . SPAC25G10.08 126 HTFVVRK|LN 0.073 . SPAC25G10.08 132 KLNQLEK|AF 0.071 . SPAC25G10.08 145 EFSFEER|EF 0.107 . SPAC25G10.08 148 FEEREFK|ER 0.114 . SPAC25G10.08 150 EREFKER|EH 0.082 . SPAC25G10.08 154 KEREHLR|SW 0.133 . SPAC25G10.08 163 LTDYYGR|DQ 0.088 . SPAC25G10.08 173 ISYYGNR|VS 0.070 . SPAC25G10.08 180 VSVNWNR|KS 0.092 . SPAC25G10.08 181 SVNWNRK|SD 0.130 . SPAC25G10.08 191 PEQIVDR|EN 0.088 . SPAC25G10.08 214 LVSLHLR|GI 0.111 . SPAC25G10.08 229 SWGMCAR|FL 0.148 . SPAC25G10.08 236 FLHPYVK|FV 0.093 . SPAC25G10.08 245 DFSPNEK|YL 0.058 . SPAC25G10.08 256 WSYEPVR|LP 0.081 . SPAC25G10.08 265 PIGHPAR|ET 0.108 . SPAC25G10.08 277 TDDDEGK|HC 0.070 . SPAC25G10.08 288 WDIASGR|IL 0.079 . SPAC25G10.08 291 ASGRILR|SF 0.287 . SPAC25G10.08 294 RILRSFK|IP 0.116 . SPAC25G10.08 303 PQPEGSK|DG 0.061 . SPAC25G10.08 306 EGSKDGK|KV 0.085 . SPAC25G10.08 307 GSKDGKK|VI 0.149 . SPAC25G10.08 314 VIWPIFK|WS 0.058 . SPAC25G10.08 320 KWSADDK|YL 0.086 . SPAC25G10.08 324 DDKYLAR|VT 0.084 . SPAC25G10.08 344 SLALVDK|KT 0.075 . SPAC25G10.08 345 LALVDKK|TI 0.099 . SPAC25G10.08 348 VDKKTIK|ID 0.073 . SPAC25G10.08 366 VSDALGR|DS 0.107 . SPAC25G10.08 369 ALGRDSK|EQ 0.098 . SPAC25G10.08 386 ITNQPAR|VA 0.133 . SPAC25G10.08 395 LISIPSK|ST 0.088 . SPAC25G10.08 399 PSKSTIR|TK 0.068 . SPAC25G10.08 401 KSTIRTK|NL 0.068 . SPAC25G10.08 410 FNVSDCK|LY 0.062 . SPAC25G10.08 423 GDYLCVK|VD 0.056 . SPAC25G10.08 426 LCVKVDR|HT 0.113 . SPAC25G10.08 429 KVDRHTK|TK 0.096 . SPAC25G10.08 431 DRHTKTK|KS 0.073 . SPAC25G10.08 432 RHTKTKK|ST 0.185 . SPAC25G10.08 442 SNLEIFR|IR 0.090 . SPAC25G10.08 444 LEIFRIR|EK 0.079 . SPAC25G10.08 446 IFRIREK|NI 0.062 . SPAC25G10.08 456 VEVVDLK|DV 0.074 . SPAC25G10.08 467 NFAWEPK|SD 0.087 . SPAC25G10.08 470 WEPKSDR|FA 0.116 . SPAC25G10.08 487 LNSTNVK|TN 0.061 . SPAC25G10.08 498 FYGFEQK|KN 0.061 . SPAC25G10.08 499 YGFEQKK|NT 0.090 . SPAC25G10.08 506 NTPSTFR|HI 0.087 . SPAC25G10.08 513 HIITFDK|KT 0.070 . SPAC25G10.08 514 IITFDKK|TC 0.080 . SPAC25G10.08 524 SLFMAPK|GR 0.070 . SPAC25G10.08 526 FMAPKGR|FM 0.121 . SPAC25G10.08 552 LDFDTEK|KE 0.061 . SPAC25G10.08 553 DFDTEKK|EP 0.075 . SPAC25G10.08 582 EWDPSGR|YV 0.151 . SPAC25G10.08 592 TSSTIWR|HK 0.116 . SPAC25G10.08 594 STIWRHK|LE 0.061 . SPAC25G10.08 600 KLENGYR|LC 0.078 . SPAC25G10.08 605 YRLCDFR|GT 0.096 . SPAC25G10.08 610 FRGTLLR|EE 0.099 . SPAC25G10.08 618 EMIGEFK|QF 0.057 . SPAC25G10.08 623 FKQFIWR|PR 0.081 . SPAC25G10.08 625 QFIWRPR|PP 0.094 . SPAC25G10.08 632 PPSPLTK|ED 0.077 . SPAC25G10.08 636 LTKEDMK|KI 0.073 . SPAC25G10.08 637 TKEDMKK|IR 0.093 . SPAC25G10.08 639 EDMKKIR|KK 0.089 . SPAC25G10.08 640 DMKKIRK|KL 0.077 . SPAC25G10.08 641 MKKIRKK|LK 0.115 . SPAC25G10.08 643 KIRKKLK|DY 0.091 . SPAC25G10.08 647 KLKDYNR|LF 0.086 . SPAC25G10.08 662 EQSSANR|EL 0.098 . SPAC25G10.08 667 NRELAAR|RR 0.073 . SPAC25G10.08 668 RELAARR|RQ 0.108 . SPAC25G10.08 669 ELAARRR|QL 0.135 . SPAC25G10.08 677 LISEWQK|YR 0.077 . SPAC25G10.08 679 SEWQKYR|DE 0.111 . SPAC25G10.08 685 RDEVIAR|VA 0.110 . SPAC25G10.08 690 ARVAEER|AI 0.126 . ____________________________^_________________

  • Fasta :-

    >SPAC25G10.08 CTGGGTGAAGAAACTTGACTAGAGACAACGGCACTACACCAGAAATGTCGGAAATCCTAA TTGAGGAAATTAAGGATCAAATCGTCGTAAAGGACGAGGAAATCGATGTTTCTGAACTGG AAGTTAAGCTTAATGTAACTAAACCTGTTGGATATGACACGGTTGTAGTAATCGAAGGTG CTCCAGTTGTCGAAGAAGCTAAGCAGCAAGATTTCTTCCGTTTTTTGAGCTCAAAAGTCC TTGCTAAAATTGGAAAGGTTAAGGAAAATGGATTTTATATGCCATTTGAGGAAAAAAATG GAAAAAAGATGTCTCTTGGACTAGTTTTCGCCGATTTTGAAAATGTTGATGGCGCCGATC TTTGCGTTCAAGAGTTGGATGGAAAGCAAATTTTAAAAAACCATACTTTCGTTGTTCGTA AGTTGAATCAACTCGAAAAAGCTTTTAGCACTCCTGATGAATTTAGTTTCGAAGAACGTG AATTTAAGGAGCGCGAACATTTGCGTAGCTGGTTAACTGATTACTATGGTCGTGATCAAT TTATCAGCTATTACGGTAACCGTGTATCTGTTAACTGGAACCGTAAGAGCGACGTCCCTG AACAGATTGTGGATCGTGAAAACTGGACCGAGACCTACGTGCAATGGTCTCCCATGGGCA CTTACCTCGTATCACTTCATCTTCGTGGTATTCAATTATGGGGTGGGGAATCTTGGGGAA TGTGTGCTCGTTTCTTGCACCCCTACGTAAAATTTGTCGACTTCAGCCCTAACGAGAAGT ATCTTGTTTCATGGTCCTATGAGCCTGTTCGACTTCCTCCCATCGGACATCCGGCTCGTG AAACAATGCCTTTCACTGATGATGATGAAGGAAAACATTGCTTCGTTTGGGATATTGCCT CTGGTCGTATTCTTCGTTCTTTTAAGATTCCTCCTCAACCAGAAGGTTCAAAGGATGGCA AAAAAGTTATTTGGCCTATTTTCAAGTGGTCTGCCGATGATAAATACCTTGCTCGCGTTA CTGTTGGTCAGTCGATTTCTGTTTATGAGACACCCTCCCTTGCTTTGGTTGACAAGAAAA CTATCAAGATCGACGGTGTGCAAAATTTTGAATGGTGCCCAGTTTCAGATGCTCTCGGAC GTGATTCCAAGGAGCAGCTTTTAGCTTACTGGACCCCTGAAATTACCAATCAACCTGCTC GCGTTGCCTTAATTAGTATTCCTTCAAAATCAACTATCCGTACGAAAAATCTTTTCAATG TTTCCGACTGTAAGTTGTACTGGCAGTCTAATGGTGATTATTTATGTGTTAAGGTTGATC GTCACACAAAAACTAAGAAATCAACATTCTCTAACCTTGAAATATTCCGAATTCGTGAGA AAAATATTCCCGTTGAAGTAGTGGATCTTAAGGATGTTGTTCTCAATTTTGCCTGGGAAC CTAAGAGTGATCGTTTTGCCATAATTTCAGCTAATGATCAAGTTTTAAATTCTACAAATG TAAAAACTAATTTATCGTTTTATGGTTTTGAGCAGAAAAAGAACACCCCTAGTACTTTCC GTCATATCATTACTTTTGATAAGAAAACATGCAATTCACTTTTTATGGCGCCTAAGGGTA GATTTATGGTTGCTGCAACCCTTGGTTCCTCTACTCAATATGATTTGGAGTTTTACGACT TAGATTTTGATACCGAAAAGAAAGAACCGGATGCTCTTGCCAATGTTCAGCAAATAGGTT CTGCCGAGCACTTTGGTATGACTGAGCTGGAGTGGGATCCTAGTGGTCGATATGTTACTA CTAGCAGTACTATTTGGAGGCATAAGCTTGAGAACGGTTACAGACTTTGCGATTTTAGGG GCACACTTCTTCGTGAAGAAATGATTGGAGAATTTAAGCAGTTTATCTGGCGTCCGAGAC CTCCTTCTCCATTGACAAAGGAAGACATGAAGAAAATTAGAAAGAAACTTAAGGATTATA ATCGTTTGTTTGATGAAGAGGATATCGCCGAACAGAGTTCCGCCAATCGTGAATTGGCAG CCCGTAGAAGACAGCTCATTAGTGAGTGGCAGAAATATAGGGATGAGGTTATTGCTCGGG TTGCGGAAGAACGTGCAATCACTGGCCAACCTGCTATCACTGTTCCTGCTGAAGAAGAAG AAATAATTCAGGAAACGGTTGAGGAAGTAATCTCTGAAGAGATAGAACCCGTTGAAGATT AAGGGCTTTACGCTACCTTTTGTCATAAAAAAATTGGGGCCTTCTTCGAAATCGGATGTT ACTTGATTAAAATCATGATCTTGTTGCCGCAATTATGTGTTCCTGGACGTGTATTTGCGT TTCGATTGGTACTGTATGGGGAAATTTATATTTACATTAGTCCTTTTAAATGGAATTGCA TTTGCGTTACATACTACTGTATATAAGTAATATAGCGTTCTTAATAGTTTTGTGAATGTC CGAGTATTATTTGACTCAAGAAAGTTTCTAAATTCATATTGTCTTAATGCACTCTAGAGA TTTAAAC
  • Download Fasta

  • Fasta :-

    MSEILIEEIKDQIVVKDEEIDVSELEVKLNVTKPVGYDTVVVIEGAPVVEEAKQQDFFRF LSSKVLAKIGKVKENGFYMPFEEKNGKKMSLGLVFADFENVDGADLCVQELDGKQILKNH TFVVRKLNQLEKAFSTPDEFSFEEREFKEREHLRSWLTDYYGRDQFISYYGNRVSVNWNR KSDVPEQIVDRENWTETYVQWSPMGTYLVSLHLRGIQLWGGESWGMCARFLHPYVKFVDF SPNEKYLVSWSYEPVRLPPIGHPARETMPFTDDDEGKHCFVWDIASGRILRSFKIPPQPE GSKDGKKVIWPIFKWSADDKYLARVTVGQSISVYETPSLALVDKKTIKIDGVQNFEWCPV SDALGRDSKEQLLAYWTPEITNQPARVALISIPSKSTIRTKNLFNVSDCKLYWQSNGDYL CVKVDRHTKTKKSTFSNLEIFRIREKNIPVEVVDLKDVVLNFAWEPKSDRFAIISANDQV LNSTNVKTNLSFYGFEQKKNTPSTFRHIITFDKKTCNSLFMAPKGRFMVAATLGSSTQYD LEFYDLDFDTEKKEPDALANVQQIGSAEHFGMTELEWDPSGRYVTTSSTIWRHKLENGYR LCDFRGTLLREEMIGEFKQFIWRPRPPSPLTKEDMKKIRKKLKDYNRLFDEEDIAEQSSA NRELAARRRQLISEWQKYRDEVIARVAEERAITGQPAITVPAEEEEIIQETVEEVISEEI EPVED

  • title: polypeptide substrate binding site
  • coordinates: I43,A46,K53,D56,F57,R59,F60,L61,K64,V65,K68,E110,L111,D112,G113,Q115,I116,T121,F122
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC25G10.08368 SLGRDSKEQL0.994unspSPAC25G10.08368 SLGRDSKEQL0.994unspSPAC25G10.08368 SLGRDSKEQL0.994unspSPAC25G10.08396 SIPSKSTIRT0.994unspSPAC25G10.08628 SPRPPSPLTK0.99unspSPAC25G10.08135 SEKAFSTPDE0.992unspSPAC25G10.08141 SPDEFSFEER0.995unsp

SPAC25G10.08      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India