SPAC25H1.04 | ubiquitin-fold modifier-specific protease (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC25H1.04OTHER0.9994580.0002060.000337
No Results

  • Fasta :-

    >SPAC25H1.04 MSKCLQQLKRQLQHFGIDGCSLADGDIDYFFTVTGIDRGWGCGWRNIQMLISWLQYTNPN WFKRNFSSGNYEINSLQSLLLSAWMKGIDAEGYAQLGDNLHGKWIGATEVYSLFTGLFVN VALVDFDFRSEASASNALFLYVKKHFESSNDTSNVSPCYLQFQGHSIIIIGFCSSLETLV VLDPDRYQSVQKKFVNIADFNHCYMRKKRSLKFSQFQLVHFKQNIFLNDFSSKLEVRSTR ISDF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/153 Sequence name : 153 Sequence length : 244 VALUES OF COMPUTED PARAMETERS Coef20 : 3.520 CoefTot : -0.722 ChDiff : 2 ZoneTo : 17 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.618 2.124 0.394 0.691 MesoH : -0.167 0.505 -0.279 0.293 MuHd_075 : 16.793 3.524 2.794 2.543 MuHd_095 : 44.752 29.717 13.858 9.390 MuHd_100 : 42.165 27.352 12.279 9.077 MuHd_105 : 33.257 22.895 9.154 7.985 Hmax_075 : -1.225 3.700 -2.552 1.550 Hmax_095 : 18.500 18.200 4.398 5.910 Hmax_100 : 18.500 18.200 4.398 5.910 Hmax_105 : 7.300 11.400 -0.659 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8312 0.1688 DFMC : 0.8913 0.1087
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 244 SPAC25H1.04 MSKCLQQLKRQLQHFGIDGCSLADGDIDYFFTVTGIDRGWGCGWRNIQMLISWLQYTNPNWFKRNFSSGNYEINSLQSLL 80 LSAWMKGIDAEGYAQLGDNLHGKWIGATEVYSLFTGLFVNVALVDFDFRSEASASNALFLYVKKHFESSNDTSNVSPCYL 160 QFQGHSIIIIGFCSSLETLVVLDPDRYQSVQKKFVNIADFNHCYMRKKRSLKFSQFQLVHFKQNIFLNDFSSKLEVRSTR 240 ISDF 320 ................................................................................ 80 ................................................................................ 160 ................................................P............................... 240 .... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPAC25H1.04 3 ----MSK|CL 0.070 . SPAC25H1.04 9 KCLQQLK|RQ 0.056 . SPAC25H1.04 10 CLQQLKR|QL 0.197 . SPAC25H1.04 38 TVTGIDR|GW 0.109 . SPAC25H1.04 45 GWGCGWR|NI 0.089 . SPAC25H1.04 63 TNPNWFK|RN 0.068 . SPAC25H1.04 64 NPNWFKR|NF 0.341 . SPAC25H1.04 86 LLSAWMK|GI 0.107 . SPAC25H1.04 103 GDNLHGK|WI 0.110 . SPAC25H1.04 129 LVDFDFR|SE 0.086 . SPAC25H1.04 143 ALFLYVK|KH 0.057 . SPAC25H1.04 144 LFLYVKK|HF 0.105 . SPAC25H1.04 186 VVLDPDR|YQ 0.081 . SPAC25H1.04 192 RYQSVQK|KF 0.061 . SPAC25H1.04 193 YQSVQKK|FV 0.263 . SPAC25H1.04 206 FNHCYMR|KK 0.091 . SPAC25H1.04 207 NHCYMRK|KR 0.082 . SPAC25H1.04 208 HCYMRKK|RS 0.079 . SPAC25H1.04 209 CYMRKKR|SL 0.835 *ProP* SPAC25H1.04 212 RKKRSLK|FS 0.231 . SPAC25H1.04 222 FQLVHFK|QN 0.061 . SPAC25H1.04 233 LNDFSSK|LE 0.059 . SPAC25H1.04 237 SSKLEVR|ST 0.153 . SPAC25H1.04 240 LEVRSTR|IS 0.262 . ____________________________^_________________

  • Fasta :-

    >SPAC25H1.04 ATGTCAAAATGCTTGCAGCAGCTTAAACGACAACTTCAGCATTTCGGCATAGATGGATGC TCATTAGCAGATGGTGACATCGATTATTTTTTCACAGTTACCGGTATTGATCGTGGATGG GGCTGTGGTTGGCGCAATATACAGATGTTAATTTCCTGGCTTCAATACACCAATCCAAAT TGGTTTAAACGTAATTTTAGTAGTGGAAATTATGAAATCAATTCTTTGCAATCGTTGTTG CTCAGCGCTTGGATGAAAGGTATAGATGCCGAAGGTTATGCTCAATTAGGAGACAACTTG CATGGTAAATGGATTGGTGCTACTGAGGTTTATAGCCTATTTACCGGGTTGTTTGTCAAC GTCGCTTTAGTAGACTTTGATTTCAGATCTGAAGCTTCTGCTAGCAATGCACTTTTTCTT TACGTTAAAAAACATTTTGAAAGTTCTAATGATACAAGCAATGTTTCTCCATGTTATTTA CAATTTCAAGGGCATTCTATCATTATCATTGGGTTCTGTTCTTCTTTAGAAACTCTTGTT GTGCTTGATCCAGATCGTTATCAGAGTGTTCAAAAAAAGTTTGTGAATATTGCGGACTTT AATCACTGTTATATGCGAAAAAAGCGATCTTTGAAATTCTCACAATTTCAATTGGTACAT TTTAAGCAAAACATTTTTTTAAATGATTTCAGTTCAAAACTGGAAGTTCGTTCTACCAGA ATTTCGGACTTTTAGCTGTCCAAGCGCTGGTGATGTTTTTCATAATATTTATGAAGGCCG TTTCCCCATATATTAATTTATAGAAAAAGGAAAAACT
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  • Fasta :-

    MSKCLQQLKRQLQHFGIDGCSLADGDIDYFFTVTGIDRGWGCGWRNIQMLISWLQYTNPN WFKRNFSSGNYEINSLQSLLLSAWMKGIDAEGYAQLGDNLHGKWIGATEVYSLFTGLFVN VALVDFDFRSEASASNALFLYVKKHFESSNDTSNVSPCYLQFQGHSIIIIGFCSSLETLV VLDPDRYQSVQKKFVNIADFNHCYMRKKRSLKFSQFQLVHFKQNIFLNDFSSKLEVRSTR ISDF

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC25H1.0467 SKRNFSSGNY0.99unspSPAC25H1.04148 SKHFESSNDT0.991unsp

SPAC25H1.04      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India