SPAC3A11.10c | dipeptidyl peptidase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC3A11.10cOTHER0.9306010.0683580.001041
No Results

  • Fasta :-

    >SPAC3A11.10c MVSDSKLELPLPVNQQKPRRRRILKVHLLIAALILSAVGYLGKGKWIWTPERKAHFVLTH FPLIDGHNDLPIYLRENYDNRLLNISLEHLPGQTDIFRLRQGHVGGQFWSVFVECPSLDS NSSLSWNRTGEYEAVTQTLQQIDVVKRMALYYPKTFSLTDHSGKVKFDFLRNHISSMMGI EGLHQIAGSPSILRQFYDLGVRYATLAHNCDNVFADAAVDGKRTNKGLSPAGRDIVREMN RLGMIVDLSHTTPETMHQALDVSVAPAFFSHSSAKGVYDHPRNVPDDVLIRVKETDGVVM VNFYPAFISPHPENATIDTVVEHIMHIANVTGSYRHIGLGGDFDGIDMVPKGLEDVSKYP DLFVKLAERGLSITELADIAGRNVLRVWKTTEDLGHSIHEPPLEWEDDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/487 Sequence name : 487 Sequence length : 409 VALUES OF COMPUTED PARAMETERS Coef20 : 3.559 CoefTot : 0.112 ChDiff : -8 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.712 2.235 0.290 0.765 MesoH : -0.754 0.199 -0.462 0.233 MuHd_075 : 7.856 6.638 0.472 1.188 MuHd_095 : 5.032 6.682 0.756 0.691 MuHd_100 : 7.359 7.216 1.890 1.057 MuHd_105 : 10.688 6.071 3.024 1.414 Hmax_075 : -2.683 2.400 -3.413 1.000 Hmax_095 : -0.962 3.762 -2.782 1.339 Hmax_100 : 7.700 8.200 -0.183 3.030 Hmax_105 : -2.800 4.667 -3.315 1.248 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9959 0.0041 DFMC : 0.9928 0.0072
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 409 SPAC3A11.10c MVSDSKLELPLPVNQQKPRRRRILKVHLLIAALILSAVGYLGKGKWIWTPERKAHFVLTHFPLIDGHNDLPIYLRENYDN 80 RLLNISLEHLPGQTDIFRLRQGHVGGQFWSVFVECPSLDSNSSLSWNRTGEYEAVTQTLQQIDVVKRMALYYPKTFSLTD 160 HSGKVKFDFLRNHISSMMGIEGLHQIAGSPSILRQFYDLGVRYATLAHNCDNVFADAAVDGKRTNKGLSPAGRDIVREMN 240 RLGMIVDLSHTTPETMHQALDVSVAPAFFSHSSAKGVYDHPRNVPDDVLIRVKETDGVVMVNFYPAFISPHPENATIDTV 320 VEHIMHIANVTGSYRHIGLGGDFDGIDMVPKGLEDVSKYPDLFVKLAERGLSITELADIAGRNVLRVWKTTEDLGHSIHE 400 PPLEWEDDF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC3A11.10c 6 -MVSDSK|LE 0.051 . SPAC3A11.10c 17 LPVNQQK|PR 0.063 . SPAC3A11.10c 19 VNQQKPR|RR 0.090 . SPAC3A11.10c 20 NQQKPRR|RR 0.117 . SPAC3A11.10c 21 QQKPRRR|RI 0.139 . SPAC3A11.10c 22 QKPRRRR|IL 0.461 . SPAC3A11.10c 25 RRRRILK|VH 0.109 . SPAC3A11.10c 43 AVGYLGK|GK 0.062 . SPAC3A11.10c 45 GYLGKGK|WI 0.070 . SPAC3A11.10c 52 WIWTPER|KA 0.113 . SPAC3A11.10c 53 IWTPERK|AH 0.075 . SPAC3A11.10c 75 DLPIYLR|EN 0.073 . SPAC3A11.10c 81 RENYDNR|LL 0.103 . SPAC3A11.10c 98 GQTDIFR|LR 0.074 . SPAC3A11.10c 100 TDIFRLR|QG 0.102 . SPAC3A11.10c 128 SSLSWNR|TG 0.079 . SPAC3A11.10c 146 QQIDVVK|RM 0.057 . SPAC3A11.10c 147 QIDVVKR|MA 0.222 . SPAC3A11.10c 154 MALYYPK|TF 0.060 . SPAC3A11.10c 164 LTDHSGK|VK 0.068 . SPAC3A11.10c 166 DHSGKVK|FD 0.072 . SPAC3A11.10c 171 VKFDFLR|NH 0.087 . SPAC3A11.10c 194 GSPSILR|QF 0.080 . SPAC3A11.10c 202 FYDLGVR|YA 0.071 . SPAC3A11.10c 222 DAAVDGK|RT 0.068 . SPAC3A11.10c 223 AAVDGKR|TN 0.122 . SPAC3A11.10c 226 DGKRTNK|GL 0.197 . SPAC3A11.10c 233 GLSPAGR|DI 0.176 . SPAC3A11.10c 237 AGRDIVR|EM 0.082 . SPAC3A11.10c 241 IVREMNR|LG 0.080 . SPAC3A11.10c 275 FSHSSAK|GV 0.131 . SPAC3A11.10c 282 GVYDHPR|NV 0.132 . SPAC3A11.10c 291 PDDVLIR|VK 0.077 . SPAC3A11.10c 293 DVLIRVK|ET 0.064 . SPAC3A11.10c 335 NVTGSYR|HI 0.111 . SPAC3A11.10c 351 GIDMVPK|GL 0.080 . SPAC3A11.10c 358 GLEDVSK|YP 0.068 . SPAC3A11.10c 365 YPDLFVK|LA 0.080 . SPAC3A11.10c 369 FVKLAER|GL 0.088 . SPAC3A11.10c 382 LADIAGR|NV 0.096 . SPAC3A11.10c 386 AGRNVLR|VW 0.093 . SPAC3A11.10c 389 NVLRVWK|TT 0.151 . ____________________________^_________________

  • Fasta :-

    >SPAC3A11.10c AGGGTTTGTATAACAACATCAGATAAGCTCATTTAAAGTGACATTAGCACTAGCAAATTA GACATTCAATCTCTGCCAAGTTTTGCTAATTATTAGTTTAACAATTGAATTTTTTGGTAA TTGACGGTGAAATATTATATTAAACATCCTGCGCCTTCATCGAGACCCAGCATATATAAC CGACGTGACATTTCCACACATCTTAACAATTGCCGCACAAGTAATCATTTTTGAACAAGA TGGTTTCCGATAGCAAATTGGAGCTTCCATTACCTGTAAACCAACAAAAACCTCGTAGAA GACGAATTTTAAAGGTTCATCTTTTAATTGCGGCTTTGATTCTGAGTGCGGTTGGCTATT TAGGCAAAGGCAAATGGATTTGGACTCCTGAACGAAAGGCTCACTTTGTACTAACTCATT TTCCTTTAATTGATGGGCATAATGATCTTCCAATATATCTTCGTGAAAATTATGATAATC GCCTTCTAAATATTTCGCTTGAGCACCTTCCTGGACAAACTGACATTTTTCGTCTTCGTC AAGGACATGTAGGGGGTCAATTCTGGTCTGTATTTGTCGAATGTCCTAGCTTGGATTCCA ATAGTTCTCTTTCGTGGAATCGCACAGGTGAATATGAAGCTGTTACACAGACTCTTCAAC AAATCGATGTTGTTAAAAGGATGGCTCTATACTACCCTAAAACATTCTCTTTGACTGATC ATAGCGGTAAGGTCAAATTCGACTTTTTACGCAATCACATTTCAAGTATGATGGGCATTG AAGGTCTTCACCAGATTGCAGGAAGCCCATCCATTTTACGCCAATTCTACGATCTTGGCG TTCGCTATGCTACTCTTGCGCACAATTGTGACAACGTATTCGCCGATGCTGCGGTTGACG GAAAGCGTACTAACAAAGGATTGTCTCCTGCGGGCCGCGATATTGTCCGTGAAATGAATC GTCTTGGTATGATTGTAGATCTTTCACACACCACACCTGAGACCATGCATCAAGCCTTAG ATGTATCAGTTGCTCCCGCATTTTTCTCACATAGTTCCGCTAAAGGGGTTTATGATCATC CCAGAAATGTTCCTGACGATGTTCTGATTCGCGTCAAGGAAACTGATGGCGTTGTTATGG TGAATTTTTACCCTGCATTCATTAGTCCACACCCTGAAAATGCTACAATTGATACCGTCG TTGAGCATATAATGCATATTGCCAATGTAACTGGATCGTATCGTCATATTGGCTTGGGTG GTGATTTCGATGGAATTGATATGGTGCCCAAGGGACTCGAGGATGTTTCCAAGTATCCTG ATCTTTTTGTTAAATTGGCTGAGCGTGGTCTCAGTATCACTGAATTAGCAGATATTGCAG GCCGTAATGTGCTTCGTGTTTGGAAGACCACTGAAGATCTCGGGCATTCAATTCATGAGC CACCTTTGGAGTGGGAAGACGACTTTTAAACTTAATCGTTTATTAATAAGTCTACCTCTA CCTCTTTATTTTATTTTTGGAAAAATTTACTGTATTATTCCATTTTGCCGGTTATGAATT TCTTACGATTAACGACAAACCATGCCTATTGCTTACTCTTTTATGCCCCTTGATGGATCG ATTATTTTACTATTAGTTAACTAGCTCTCTTAGTTAATGTAATAAATTTTTGTTTGCTTT GAGATTATTTTCCACAGTATAATTTTTACGCATGTGTCCAATAATATAAAA
  • Download Fasta

  • Fasta :-

    MVSDSKLELPLPVNQQKPRRRRILKVHLLIAALILSAVGYLGKGKWIWTPERKAHFVLTH FPLIDGHNDLPIYLRENYDNRLLNISLEHLPGQTDIFRLRQGHVGGQFWSVFVECPSLDS NSSLSWNRTGEYEAVTQTLQQIDVVKRMALYYPKTFSLTDHSGKVKFDFLRNHISSMMGI EGLHQIAGSPSILRQFYDLGVRYATLAHNCDNVFADAAVDGKRTNKGLSPAGRDIVREMN RLGMIVDLSHTTPETMHQALDVSVAPAFFSHSSAKGVYDHPRNVPDDVLIRVKETDGVVM VNFYPAFISPHPENATIDTVVEHIMHIANVTGSYRHIGLGGDFDGIDMVPKGLEDVSKYP DLFVKLAERGLSITELADIAGRNVLRVWKTTEDLGHSIHEPPLEWEDDF

  • title: active site
  • coordinates: H67,D69,F112,E181,H250,H271,R282,D342,G345
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC3A11.10c372 SERGLSITEL0.994unspSPAC3A11.10c372 SERGLSITEL0.994unspSPAC3A11.10c372 SERGLSITEL0.994unspSPAC3A11.10c125 SNSSLSWNRT0.993unspSPAC3A11.10c229 SNKGLSPAGR0.991unsp

SPAC3A11.10c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India