SPAC3H1.05 | CAAX prenyl protease (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC3H1.05OTHER0.9909780.0017120.007310
No Results

  • Fasta :-

    >SPAC3H1.05 MSPGLCFLKEISVIQATPKPTTRSFANCCKMGILQHLMHILDIPGFPWKIVIAGFSIGKY AWDLYLRRRQVPYLLREKPPAILAEHVDEKKYQKALSYARDKSWFSTIVSTFTLAVDLLI IKYDGLSYLWNITKFPWMDKLAASSSRFSLSTSITHSCVFMFGLTLFSRLIQIPFNLYST FVIEEKYGFNKSTLKIFVIDLLKELSLGGLLMSVVVGVFVKILTKFGDNFIMYAWGAYIV FGLILQTIAPSLIMPLFYKFTPLENGSLRTQIEELAASINFPLKKLYVIDASRRSTHSNA FFYGLPWNKGIVLFDTLVKNHTEPELIAILGHELGHWYMSHNLINTIIDYGMSLFHLFLF AAFIRNNSLYTSFNFITEKPVIVGLLLFSDALGPLSSILTFASNKVSRLCEYQADAFAKQ LGYAKDLGDGLIRIHDDNLSPLEFDSLYTSYYHSHPILVDRLNAIDYTTLKKNN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/515 Sequence name : 515 Sequence length : 474 VALUES OF COMPUTED PARAMETERS Coef20 : 3.604 CoefTot : -2.805 ChDiff : 8 ZoneTo : 76 KR : 10 DE : 3 CleavSite : 78 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.835 2.324 0.294 0.782 MesoH : 0.733 1.283 -0.053 0.535 MuHd_075 : 38.902 20.554 10.475 7.604 MuHd_095 : 45.744 25.583 14.627 8.931 MuHd_100 : 41.452 20.452 12.984 7.779 MuHd_105 : 33.913 25.086 10.726 7.586 Hmax_075 : 13.300 10.733 2.715 4.000 Hmax_095 : 14.350 12.512 4.765 3.762 Hmax_100 : 15.200 11.800 4.393 3.710 Hmax_105 : 6.900 17.200 3.355 6.340 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7625 0.2375 DFMC : 0.6202 0.3798
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 474 SPAC3H1.05 MSPGLCFLKEISVIQATPKPTTRSFANCCKMGILQHLMHILDIPGFPWKIVIAGFSIGKYAWDLYLRRRQVPYLLREKPP 80 AILAEHVDEKKYQKALSYARDKSWFSTIVSTFTLAVDLLIIKYDGLSYLWNITKFPWMDKLAASSSRFSLSTSITHSCVF 160 MFGLTLFSRLIQIPFNLYSTFVIEEKYGFNKSTLKIFVIDLLKELSLGGLLMSVVVGVFVKILTKFGDNFIMYAWGAYIV 240 FGLILQTIAPSLIMPLFYKFTPLENGSLRTQIEELAASINFPLKKLYVIDASRRSTHSNAFFYGLPWNKGIVLFDTLVKN 320 HTEPELIAILGHELGHWYMSHNLINTIIDYGMSLFHLFLFAAFIRNNSLYTSFNFITEKPVIVGLLLFSDALGPLSSILT 400 FASNKVSRLCEYQADAFAKQLGYAKDLGDGLIRIHDDNLSPLEFDSLYTSYYHSHPILVDRLNAIDYTTLKKNN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC3H1.05 9 PGLCFLK|EI 0.072 . SPAC3H1.05 19 VIQATPK|PT 0.072 . SPAC3H1.05 23 TPKPTTR|SF 0.148 . SPAC3H1.05 30 SFANCCK|MG 0.063 . SPAC3H1.05 49 IPGFPWK|IV 0.109 . SPAC3H1.05 59 AGFSIGK|YA 0.063 . SPAC3H1.05 67 AWDLYLR|RR 0.056 . SPAC3H1.05 68 WDLYLRR|RQ 0.087 . SPAC3H1.05 69 DLYLRRR|QV 0.162 . SPAC3H1.05 76 QVPYLLR|EK 0.071 . SPAC3H1.05 78 PYLLREK|PP 0.051 . SPAC3H1.05 90 AEHVDEK|KY 0.070 . SPAC3H1.05 91 EHVDEKK|YQ 0.080 . SPAC3H1.05 94 DEKKYQK|AL 0.074 . SPAC3H1.05 100 KALSYAR|DK 0.093 . SPAC3H1.05 102 LSYARDK|SW 0.086 . SPAC3H1.05 122 VDLLIIK|YD 0.059 . SPAC3H1.05 134 YLWNITK|FP 0.060 . SPAC3H1.05 140 KFPWMDK|LA 0.058 . SPAC3H1.05 147 LAASSSR|FS 0.088 . SPAC3H1.05 169 GLTLFSR|LI 0.076 . SPAC3H1.05 186 TFVIEEK|YG 0.060 . SPAC3H1.05 191 EKYGFNK|ST 0.087 . SPAC3H1.05 195 FNKSTLK|IF 0.056 . SPAC3H1.05 203 FVIDLLK|EL 0.058 . SPAC3H1.05 221 VVGVFVK|IL 0.069 . SPAC3H1.05 225 FVKILTK|FG 0.060 . SPAC3H1.05 259 IMPLFYK|FT 0.063 . SPAC3H1.05 269 LENGSLR|TQ 0.100 . SPAC3H1.05 284 SINFPLK|KL 0.071 . SPAC3H1.05 285 INFPLKK|LY 0.077 . SPAC3H1.05 293 YVIDASR|RS 0.070 . SPAC3H1.05 294 VIDASRR|ST 0.211 . SPAC3H1.05 309 YGLPWNK|GI 0.056 . SPAC3H1.05 319 LFDTLVK|NH 0.053 . SPAC3H1.05 365 LFAAFIR|NN 0.086 . SPAC3H1.05 379 FNFITEK|PV 0.082 . SPAC3H1.05 405 LTFASNK|VS 0.059 . SPAC3H1.05 408 ASNKVSR|LC 0.129 . SPAC3H1.05 419 QADAFAK|QL 0.091 . SPAC3H1.05 425 KQLGYAK|DL 0.092 . SPAC3H1.05 433 LGDGLIR|IH 0.080 . SPAC3H1.05 461 HPILVDR|LN 0.091 . SPAC3H1.05 471 IDYTTLK|KN 0.060 . SPAC3H1.05 472 DYTTLKK|NN 0.076 . ____________________________^_________________

  • Fasta :-

    >SPAC3H1.05 CAGATGTTTTGTACGAATGAGATGACATCGAATTATTACATACTTTGCTTAATTATAACA ATTAGCTAACTAGCTGACTATAAAGCAACAACTGTATACACATTTTATACTAACTGCCTG CATTAACTACTAAAATTTAATTATGCTGGTTGAGTTATTAAGACTATTGCGCTTAGTTTG AATAGAATTCCAATTCATGTCCAAGGCATTAAGAAGCCGCCAAAAAGCATACTGTTATAG TAGTATTTAGCTTCTGAATATAACTTCACCGAGTTCTTTTCAAGATAAAATTAATTTTAT CTTTACTTACATATTCCAATTCTTTATTTTCGTTAATTTCATCTGGCAATTTTAATGTTG TTGATGCAACGGCTAAATAGACAAAGAAAAGTTGAGATTTCATTTTCGTTATCTATGATA TATGCGTTATGCCTGTTAAAAATATTTACAGAATCACAATCCATTTTTAACTGAATTAAT GGACGCAAATTATGTATTAAATGTCTAGGTCTTATGCACACCAAGGTAGCATGCGTGCAA CATGAATGTTACAATATGTTTCTCGCAAAAAGCTATTTGATTACTTCTTTTTGTTTTTTC TTCGATAGTTGAACTCTATTTATGTCACCTGGCCTTTGCTTCCTAAAAGAAATTTCAGTC ATACAAGCTACACCAAAGCCTACTACAAGAAGTTTTGCCAATTGTTGTAAAATGGGAATT CTACAGCATTTGATGCACATTTTAGACATTCCAGGCTTCCCTTGGAAAATAGTAATTGCT GGATTTTCTATTGGAAAGTATGCCTGGGATTTGTATCTTCGTCGCAGGCAAGTGCCATAT TTGTTGAGAGAAAAGCCTCCTGCTATTTTAGCTGAACACGTTGATGAAAAAAAGTACCAA AAAGCATTGTCTTATGCTCGTGATAAAAGTTGGTTTTCTACTATTGTTTCCACATTTACT TTAGCCGTTGATCTTTTGATTATTAAATATGATGGACTTTCATACCTTTGGAATATCACT AAGTTTCCTTGGATGGATAAATTAGCTGCTTCATCCTCAAGGTTTAGTCTATCGACTTCG ATTACGCATTCCTGTGTTTTCATGTTTGGACTTACTCTGTTTTCTCGTTTAATTCAAATT CCTTTCAATCTTTACTCAACCTTTGTGATCGAGGAAAAGTATGGTTTTAATAAATCGACT TTAAAGATCTTCGTAATTGATCTTTTAAAGGAATTAAGCCTTGGTGGTTTACTTATGAGT GTTGTCGTTGGTGTTTTCGTTAAAATTTTGACCAAGTTTGGTGATAATTTTATTATGTAT GCATGGGGTGCCTATATTGTTTTTGGCCTCATTTTACAAACTATTGCTCCTTCTCTAATT ATGCCCTTGTTTTACAAGTTTACACCGCTTGAAAATGGAAGTCTTAGAACACAAATTGAA GAGTTAGCTGCCAGTATCAATTTTCCCTTGAAGAAGCTTTATGTGATTGATGCTAGTCGT AGATCAACTCACTCCAACGCTTTCTTTTATGGGCTTCCATGGAACAAAGGAATTGTACTT TTTGATACTCTTGTGAAAAATCATACGGAACCGGAACTTATTGCAATTCTTGGTCACGAA CTTGGTCATTGGTACATGTCTCATAATTTAATTAATACTATTATAGACTACGGAATGAGT CTGTTCCACCTCTTCTTATTTGCTGCTTTTATTCGAAATAATAGCTTATACACTTCCTTC AATTTCATTACCGAAAAACCTGTAATTGTTGGACTTCTCCTTTTTTCGGACGCATTAGGT CCTTTATCCTCCATCCTTACGTTTGCCTCCAACAAAGTTTCTCGCCTTTGTGAGTATCAA GCGGATGCTTTTGCTAAACAATTAGGGTACGCAAAGGATTTGGGTGATGGTTTAATACGC ATTCATGATGACAATCTTTCTCCTTTGGAGTTTGATTCTTTATATACCTCGTATTACCAT AGTCATCCCATCTTGGTTGATCGTTTGAATGCAATTGATTACACGACGCTAAAAAAGAAC AATTAGGTTTCATGAGTGAATGAAATTATGTCAAATGCACGAATTTGCCTTAAAATTGTT AAAATATATTATGCTTACATATCTGTATAGAAAAATGATATTACTAGTAACAATGAGTAG CAACGATTCAATATGAACGTATACTAAAC
  • Download Fasta

  • Fasta :-

    MSPGLCFLKEISVIQATPKPTTRSFANCCKMGILQHLMHILDIPGFPWKIVIAGFSIGKY AWDLYLRRRQVPYLLREKPPAILAEHVDEKKYQKALSYARDKSWFSTIVSTFTLAVDLLI IKYDGLSYLWNITKFPWMDKLAASSSRFSLSTSITHSCVFMFGLTLFSRLIQIPFNLYST FVIEEKYGFNKSTLKIFVIDLLKELSLGGLLMSVVVGVFVKILTKFGDNFIMYAWGAYIV FGLILQTIAPSLIMPLFYKFTPLENGSLRTQIEELAASINFPLKKLYVIDASRRSTHSNA FFYGLPWNKGIVLFDTLVKNHTEPELIAILGHELGHWYMSHNLINTIIDYGMSLFHLFLF AAFIRNNSLYTSFNFITEKPVIVGLLLFSDALGPLSSILTFASNKVSRLCEYQADAFAKQ LGYAKDLGDGLIRIHDDNLSPLEFDSLYTSYYHSHPILVDRLNAIDYTTLKKNN

    No Results
  • title: Zn binding site
  • coordinates: H332,H336,E411,H455
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC3H1.05149 SSSRFSLSTS0.992unspSPAC3H1.05295 SASRRSTHSN0.994unsp

SPAC3H1.05      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India