SPAC4A8.04 | vacuolar serine protease Isp6

_IDPredictionOTHERSPmTPCS_Position
SPAC4A8.04SP0.0036880.9954860.000826CS pos: 24-25. ACA-AP. Pr: 0.7236
No Results

  • Fasta :-

    >SPAC4A8.04 MRIPYSNLFSAAAGLALFASTACAAPVMPATDSDIAHAGIRPELDNAFYDSHGEAATPKH KPHAGPNAAPLLSASNADTTGLDSHYIIVLQPDLSEQEFQAHTNWVSEMHQMDIASQEDE YYDTSDSNYMFGLKHVYDFGEDSFKGYSGQFSSNIVEQIRLHPHVIAVERDQVVSIKKLE TQSGAPWGLARISHKSVKYDDIGKYVYDSSAGDNITAYVVDTGVSIHHVEFEGRASWGAT IPSGDVDEDNNGHGTHVAGTIASRAYGVAKKAEIVAVKVLRSSGSGTMADVIAGVEWTVR HHKSSGKKTSVGNMSLGGGNSFVLDMAVDSAVTNGVIYAVAAGNEYDDACYSSPAASKKA ITVGASTINDQMAYFSNYGSCVDIFAPGLNILSTWIGSNTSTNTISGTSMATPHVAGLSA YYLGLHPAASASEVKDAIIKMGIHDVLLSIPVGSSTINLLAFNGAQE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/236 Sequence name : 236 Sequence length : 467 VALUES OF COMPUTED PARAMETERS Coef20 : 4.549 CoefTot : 0.806 ChDiff : -22 ZoneTo : 31 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.906 1.729 0.367 0.615 MesoH : 0.553 0.569 -0.124 0.351 MuHd_075 : 20.083 11.752 4.257 5.448 MuHd_095 : 11.626 9.834 3.087 3.586 MuHd_100 : 11.592 13.912 4.376 3.262 MuHd_105 : 10.427 14.159 3.859 4.188 Hmax_075 : 17.500 19.300 2.887 6.740 Hmax_095 : 13.400 15.000 3.501 5.520 Hmax_100 : 15.700 18.300 4.280 5.540 Hmax_105 : 16.450 18.433 3.924 5.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8439 0.1561 DFMC : 0.7394 0.2606
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 467 SPAC4A8.04 MRIPYSNLFSAAAGLALFASTACAAPVMPATDSDIAHAGIRPELDNAFYDSHGEAATPKHKPHAGPNAAPLLSASNADTT 80 GLDSHYIIVLQPDLSEQEFQAHTNWVSEMHQMDIASQEDEYYDTSDSNYMFGLKHVYDFGEDSFKGYSGQFSSNIVEQIR 160 LHPHVIAVERDQVVSIKKLETQSGAPWGLARISHKSVKYDDIGKYVYDSSAGDNITAYVVDTGVSIHHVEFEGRASWGAT 240 IPSGDVDEDNNGHGTHVAGTIASRAYGVAKKAEIVAVKVLRSSGSGTMADVIAGVEWTVRHHKSSGKKTSVGNMSLGGGN 320 SFVLDMAVDSAVTNGVIYAVAAGNEYDDACYSSPAASKKAITVGASTINDQMAYFSNYGSCVDIFAPGLNILSTWIGSNT 400 STNTISGTSMATPHVAGLSAYYLGLHPAASASEVKDAIIKMGIHDVLLSIPVGSSTINLLAFNGAQE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC4A8.04 2 -----MR|IP 0.088 . SPAC4A8.04 41 IAHAGIR|PE 0.075 . SPAC4A8.04 59 GEAATPK|HK 0.076 . SPAC4A8.04 61 AATPKHK|PH 0.056 . SPAC4A8.04 134 NYMFGLK|HV 0.075 . SPAC4A8.04 145 FGEDSFK|GY 0.075 . SPAC4A8.04 160 NIVEQIR|LH 0.077 . SPAC4A8.04 170 HVIAVER|DQ 0.096 . SPAC4A8.04 177 DQVVSIK|KL 0.074 . SPAC4A8.04 178 QVVSIKK|LE 0.080 . SPAC4A8.04 191 APWGLAR|IS 0.121 . SPAC4A8.04 195 LARISHK|SV 0.108 . SPAC4A8.04 198 ISHKSVK|YD 0.096 . SPAC4A8.04 204 KYDDIGK|YV 0.071 . SPAC4A8.04 234 HVEFEGR|AS 0.092 . SPAC4A8.04 264 AGTIASR|AY 0.098 . SPAC4A8.04 270 RAYGVAK|KA 0.092 . SPAC4A8.04 271 AYGVAKK|AE 0.095 . SPAC4A8.04 278 AEIVAVK|VL 0.064 . SPAC4A8.04 281 VAVKVLR|SS 0.181 . SPAC4A8.04 300 GVEWTVR|HH 0.078 . SPAC4A8.04 303 WTVRHHK|SS 0.353 . SPAC4A8.04 307 HHKSSGK|KT 0.083 . SPAC4A8.04 308 HKSSGKK|TS 0.103 . SPAC4A8.04 358 SSPAASK|KA 0.077 . SPAC4A8.04 359 SPAASKK|AI 0.221 . SPAC4A8.04 435 ASASEVK|DA 0.092 . SPAC4A8.04 440 VKDAIIK|MG 0.057 . ____________________________^_________________

  • Fasta :-

    >SPAC4A8.04 AACGAAAGAGGTAGCCCCCATTGAGTCGTGTATCAGTACGCTCCTCGTTACAAAGTCAAA CGTCTTAGAACAAGTTGCATTGGAATTGAATTTACCAGTGCCACTAGTTTTGATTTTGTT TCATTCACAGTCGTTTTTTTTCGCTTTGTGTTTTTCATTTGCTTGCAATTTTTTATTTTA TTAAAGTAATTGTTAGAGAATTATTATAGTTTCTTTCTCCCTTTCTTTATAATAACTCTT AATCCCATTGTTCGCCCATATACTACTTACTATAGTTTGTATATAGCCCACAATTCTTTT TTTTTTTCTTTTATTCATCTCTCTCGATTTCTTCCTATCTGAACTTGGGATAGATAGTTA GTTTTTCAATAGTCTTTGTCATCTGTTTTCCTTGTCTTTCTTTCATAAGTAAACACGGAA CAACGATACTTGCCTACTGTTCAGCAATCTCAGCAATTTAACCGCCTTCAATCACTACCC CAACCACAATCACAATCACTTCCCCCTCCAACAGCCTCGTCTTCTCAGCATCAACATGAG AATTCCTTATTCAAATCTTTTTTCTGCCGCCGCAGGTTTGGCCCTCTTCGCTTCTACTGC CTGTGCTGCACCAGTGATGCCAGCGACTGATTCGGACATTGCCCATGCTGGTATCCGTCC TGAGCTCGATAACGCTTTCTACGACTCCCACGGCGAAGCCGCTACCCCTAAGCACAAACC TCATGCTGGTCCTAATGCCGCTCCTCTCTTGTCTGCTTCCAACGCCGATACCACTGGACT GGACTCTCACTATATCATTGTTTTGCAGCCTGATTTGAGCGAACAAGAATTCCAAGCCCA TACTAATTGGGTCTCGGAGATGCACCAAATGGACATTGCTTCTCAAGAAGATGAGTACTA CGATACTAGTGATAGTAATTACATGTTTGGCTTGAAGCATGTTTATGACTTTGGCGAGGA CTCTTTCAAAGGTTATTCTGGTCAATTCAGCTCTAACATTGTTGAGCAAATTCGCTTGCA TCCTCATGTCATCGCCGTCGAGCGTGATCAAGTTGTCAGCATTAAGAAACTTGAAACTCA AAGTGGCGCTCCTTGGGGACTTGCTCGCATCTCTCACAAATCCGTCAAATACGATGATAT TGGCAAATATGTTTACGATTCCAGCGCTGGTGACAACATCACCGCTTATGTTGTAGATAC CGGTGTAAGCATTCATCATGTTGAGTTCGAAGGTCGCGCTTCTTGGGGTGCAACCATTCC CTCTGGTGATGTTGATGAGGATAACAATGGTCATGGTACGCATGTTGCTGGTACCATTGC TAGCCGTGCTTATGGTGTTGCAAAGAAGGCTGAAATCGTTGCTGTCAAGGTTCTCCGTTC CAGTGGATCTGGTACCATGGCTGATGTGATTGCCGGTGTTGAGTGGACTGTTCGTCATCA CAAATCGTCCGGCAAGAAAACCTCTGTTGGCAACATGTCTCTTGGTGGCGGCAACAGCTT TGTTTTGGATATGGCTGTTGATTCTGCCGTTACCAACGGTGTTATTTATGCCGTTGCTGC TGGAAATGAGTATGATGACGCTTGCTATTCATCTCCTGCTGCTTCTAAGAAAGCCATCAC CGTTGGCGCTTCCACTATAAACGACCAAATGGCCTACTTCTCTAACTATGGTAGCTGTGT TGACATCTTCGCTCCTGGACTTAACATTTTGTCTACATGGATCGGTTCAAATACTAGTAC TAACACCATCTCTGGTACTTCTATGGCAACCCCTCATGTTGCAGGTTTGTCCGCTTACTA CCTTGGCCTACACCCTGCTGCCAGCGCTAGCGAAGTTAAAGATGCTATCATTAAGATGGG TATTCACGATGTACTCTTGTCTATTCCTGTTGGTAGCAGCACTATTAACCTTCTCGCTTT CAATGGTGCTCAAGAATAGATTTTACTTCATGTTGGATGCATTCGATGTTTTCAATAAGT CGGTGTTTGATTTTCAATACATCGAGTAATTGTTTTATTTTTTTGAAAACGTTTGCTCCT TTTATGATTGTTCTTTACAAACAGTTTATAATGATTGTTATGACAATAAATATTTTATAA TGCAAGCCACTGAATCACGTTTAGAATTTTTATACTTGAATGAAATTTTTTTGTGATGTT CTTCCAA
  • Download Fasta

  • Fasta :-

    MRIPYSNLFSAAAGLALFASTACAAPVMPATDSDIAHAGIRPELDNAFYDSHGEAATPKH KPHAGPNAAPLLSASNADTTGLDSHYIIVLQPDLSEQEFQAHTNWVSEMHQMDIASQEDE YYDTSDSNYMFGLKHVYDFGEDSFKGYSGQFSSNIVEQIRLHPHVIAVERDQVVSIKKLE TQSGAPWGLARISHKSVKYDDIGKYVYDSSAGDNITAYVVDTGVSIHHVEFEGRASWGAT IPSGDVDEDNNGHGTHVAGTIASRAYGVAKKAEIVAVKVLRSSGSGTMADVIAGVEWTVR HHKSSGKKTSVGNMSLGGGNSFVLDMAVDSAVTNGVIYAVAAGNEYDDACYSSPAASKKA ITVGASTINDQMAYFSNYGSCVDIFAPGLNILSTWIGSNTSTNTISGTSMATPHVAGLSA YYLGLHPAASASEVKDAIIKMGIHDVLLSIPVGSSTINLLAFNGAQE

    No Results
  • title: active site
  • coordinates: D221,H253,L316,G317,N344,S406,S409
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC4A8.04236 SEGRASWGAT0.995unspSPAC4A8.04236 SEGRASWGAT0.995unspSPAC4A8.04236 SEGRASWGAT0.995unspSPAC4A8.04283 SVLRSSGSGT0.995unspSPAC4A8.04305 SHHKSSGKKT0.996unspSPAC4A8.04357 SSPAASKKAI0.992unspSPAC4A8.04193 SLARISHKSV0.992unspSPAC4A8.04196 SISHKSVKYD0.994unsp

SPAC4A8.04      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India