SPAC56E4.06c | gamma-glutamyltranspeptidase Ggt2

_IDPredictionOTHERSPmTPCS_Position
SPAC56E4.06cOTHER0.9999200.0000720.000008
No Results

  • Fasta :-

    >SPAC56E4.06c MSPTDTTPLLYSWDDQSRHQDPDWHKLRNYHGAWYRRISRRRFSQFIFAFGLMTLFVLVY SISSNLHTPTQFTGHKVRGRRGAVASEVPVCSDIGVSMLADGGNAVDAAIASTFCIGVVN FFSSGIGGGGFMLIKHPNETAQSLTFREIAPGNVSKHMFDKNPMLAQVGPLSIAIPGELA GLYEAWKSHGLLDWSKLLEPNVKLAREGFPVTRAMERVLKLPEMAHLLKDPIWQPILMPN GKVLRAGDKMFRPAYAKTLEIIANKGIEPFYRGELTNSMVKFIQDNGGIVTVEDFGNYST VFADALHTSYRGHDVYTCTLPTSGPALIEGLNILDGYPLNTPSLAFPKRLHLEVEAMKWL SAGRTQFGDPDFLPLDHLDVVSKLLSKEFASQIRNNISLSKTYPWEHYNPSYDLPISHGT THVSTVDSNNLAVSITSTVNLLFGSQLMDPVTGVVFNDQMDDFSIPGASNAFNLSPSPWN FIEPFKRPQSSSAPTILTDINGDFEMALGASGGSRIVTAVLDSIIKRIDMDYDIESMVAS ARPHHQLLPDILILESGFSKSVATRMKKYGHKVWRLKQHDTPLSQIQAVTRHHSEYYGMS DPRKYGQAAAY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/877 Sequence name : 877 Sequence length : 611 VALUES OF COMPUTED PARAMETERS Coef20 : 3.417 CoefTot : -0.141 ChDiff : -2 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.453 2.382 0.408 0.875 MesoH : 0.257 0.724 -0.115 0.352 MuHd_075 : 19.183 5.107 2.947 0.963 MuHd_095 : 17.400 9.070 2.278 3.271 MuHd_100 : 20.973 9.313 3.716 3.718 MuHd_105 : 27.292 10.091 5.270 4.453 Hmax_075 : 4.500 -1.167 -2.217 0.460 Hmax_095 : 3.588 2.450 -1.852 2.048 Hmax_100 : 9.700 2.800 -0.401 2.720 Hmax_105 : 8.750 0.100 -1.153 2.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9719 0.0281 DFMC : 0.9479 0.0521
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 611 SPAC56E4.06c MSPTDTTPLLYSWDDQSRHQDPDWHKLRNYHGAWYRRISRRRFSQFIFAFGLMTLFVLVYSISSNLHTPTQFTGHKVRGR 80 RGAVASEVPVCSDIGVSMLADGGNAVDAAIASTFCIGVVNFFSSGIGGGGFMLIKHPNETAQSLTFREIAPGNVSKHMFD 160 KNPMLAQVGPLSIAIPGELAGLYEAWKSHGLLDWSKLLEPNVKLAREGFPVTRAMERVLKLPEMAHLLKDPIWQPILMPN 240 GKVLRAGDKMFRPAYAKTLEIIANKGIEPFYRGELTNSMVKFIQDNGGIVTVEDFGNYSTVFADALHTSYRGHDVYTCTL 320 PTSGPALIEGLNILDGYPLNTPSLAFPKRLHLEVEAMKWLSAGRTQFGDPDFLPLDHLDVVSKLLSKEFASQIRNNISLS 400 KTYPWEHYNPSYDLPISHGTTHVSTVDSNNLAVSITSTVNLLFGSQLMDPVTGVVFNDQMDDFSIPGASNAFNLSPSPWN 480 FIEPFKRPQSSSAPTILTDINGDFEMALGASGGSRIVTAVLDSIIKRIDMDYDIESMVASARPHHQLLPDILILESGFSK 560 SVATRMKKYGHKVWRLKQHDTPLSQIQAVTRHHSEYYGMSDPRKYGQAAAY 640 ................................................................................ 80 P............................................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPAC56E4.06c 18 SWDDQSR|HQ 0.088 . SPAC56E4.06c 26 QDPDWHK|LR 0.059 . SPAC56E4.06c 28 PDWHKLR|NY 0.101 . SPAC56E4.06c 36 YHGAWYR|RI 0.099 . SPAC56E4.06c 37 HGAWYRR|IS 0.151 . SPAC56E4.06c 40 WYRRISR|RR 0.144 . SPAC56E4.06c 41 YRRISRR|RF 0.298 . SPAC56E4.06c 42 RRISRRR|FS 0.206 . SPAC56E4.06c 76 TQFTGHK|VR 0.061 . SPAC56E4.06c 78 FTGHKVR|GR 0.118 . SPAC56E4.06c 80 GHKVRGR|RG 0.079 . SPAC56E4.06c 81 HKVRGRR|GA 0.643 *ProP* SPAC56E4.06c 135 GGFMLIK|HP 0.058 . SPAC56E4.06c 147 AQSLTFR|EI 0.137 . SPAC56E4.06c 156 APGNVSK|HM 0.088 . SPAC56E4.06c 161 SKHMFDK|NP 0.074 . SPAC56E4.06c 187 GLYEAWK|SH 0.074 . SPAC56E4.06c 196 GLLDWSK|LL 0.064 . SPAC56E4.06c 203 LLEPNVK|LA 0.072 . SPAC56E4.06c 206 PNVKLAR|EG 0.094 . SPAC56E4.06c 213 EGFPVTR|AM 0.103 . SPAC56E4.06c 217 VTRAMER|VL 0.079 . SPAC56E4.06c 220 AMERVLK|LP 0.096 . SPAC56E4.06c 229 EMAHLLK|DP 0.067 . SPAC56E4.06c 242 ILMPNGK|VL 0.076 . SPAC56E4.06c 245 PNGKVLR|AG 0.101 . SPAC56E4.06c 249 VLRAGDK|MF 0.064 . SPAC56E4.06c 252 AGDKMFR|PA 0.095 . SPAC56E4.06c 257 FRPAYAK|TL 0.070 . SPAC56E4.06c 265 LEIIANK|GI 0.077 . SPAC56E4.06c 272 GIEPFYR|GE 0.088 . SPAC56E4.06c 281 LTNSMVK|FI 0.072 . SPAC56E4.06c 311 ALHTSYR|GH 0.135 . SPAC56E4.06c 348 PSLAFPK|RL 0.065 . SPAC56E4.06c 349 SLAFPKR|LH 0.258 . SPAC56E4.06c 358 LEVEAMK|WL 0.086 . SPAC56E4.06c 364 KWLSAGR|TQ 0.073 . SPAC56E4.06c 383 HLDVVSK|LL 0.074 . SPAC56E4.06c 387 VSKLLSK|EF 0.057 . SPAC56E4.06c 394 EFASQIR|NN 0.080 . SPAC56E4.06c 401 NNISLSK|TY 0.057 . SPAC56E4.06c 486 NFIEPFK|RP 0.055 . SPAC56E4.06c 487 FIEPFKR|PQ 0.202 . SPAC56E4.06c 515 GASGGSR|IV 0.209 . SPAC56E4.06c 526 VLDSIIK|RI 0.056 . SPAC56E4.06c 527 LDSIIKR|ID 0.208 . SPAC56E4.06c 542 SMVASAR|PH 0.120 . SPAC56E4.06c 560 LESGFSK|SV 0.108 . SPAC56E4.06c 565 SKSVATR|MK 0.134 . SPAC56E4.06c 567 SVATRMK|KY 0.079 . SPAC56E4.06c 568 VATRMKK|YG 0.282 . SPAC56E4.06c 572 MKKYGHK|VW 0.067 . SPAC56E4.06c 575 YGHKVWR|LK 0.099 . SPAC56E4.06c 577 HKVWRLK|QH 0.072 . SPAC56E4.06c 591 QIQAVTR|HH 0.115 . SPAC56E4.06c 603 YGMSDPR|KY 0.112 . SPAC56E4.06c 604 GMSDPRK|YG 0.105 . ____________________________^_________________

  • Fasta :-

    >SPAC56E4.06c GCATTTATAACCTTGTGATAAAGGCTGAAGCAGGATGAGTGAAATGATAAAGTGACACGT TATCGATCATTAAACAACACCTGCGCTTAGATAATTTTCTCAACACTTGAGTTATTCAAC TGTTCTCGTTACCCTTGAAAACAGTTGGTTTCTAGAGAATTAAGAGGATTTCTAAATTAT TGATCAAATTTTATCTGTTGTTTTCTCTCAGTTGCTTTCGTTGATTATAATTGTCGCTCG TTGAGTTTAATCGGTATAAAAAGCGAGAACATTAGAAGTTTTGGCGTCTGAAAGAAGCTA GCTCCTTTTTTTACTTTCATTTTTTTTCTTTAATCTGTGTGTAAATAGCTTTAAGTCATT GTGTAATAATTTTTTTTGGTTTCGTAATGAGCCCTACAGACACTACCCCATTGCTGTATT CATGGGACGATCAATCAAGACATCAAGACCCCGATTGGCATAAGCTCCGTAATTATCATG GTGCGTGGTATCGGAGGATCTCAAGACGGCGGTTCAGCCAATTTATTTTTGCTTTTGGAC TGATGACTCTGTTTGTTTTAGTGTATTCAATCAGTTCCAATTTGCATACTCCAACACAAT TCACAGGTCATAAAGTTAGAGGAAGGCGAGGTGCCGTTGCCTCAGAAGTGCCTGTTTGCT CTGACATCGGTGTGAGCATGCTTGCAGACGGTGGTAATGCAGTAGATGCTGCCATAGCAT CCACTTTTTGCATTGGAGTTGTTAATTTCTTCTCGAGTGGAATTGGTGGAGGTGGTTTCA TGTTAATCAAACATCCCAACGAAACCGCGCAGTCCTTGACGTTTCGCGAAATAGCTCCTG GAAATGTGAGTAAACATATGTTCGATAAAAATCCGATGCTTGCTCAAGTTGGGCCCCTTT CCATTGCTATTCCTGGTGAATTAGCTGGCCTCTACGAGGCTTGGAAGAGTCATGGTCTGC TCGATTGGTCGAAATTGCTGGAACCCAATGTTAAACTTGCTAGAGAAGGATTTCCTGTGA CTCGAGCAATGGAAAGAGTTTTGAAATTGCCAGAAATGGCCCATCTTCTTAAAGATCCAA TTTGGCAGCCTATCCTTATGCCAAATGGGAAAGTACTTAGGGCTGGCGATAAAATGTTTC GTCCGGCATATGCTAAGACTTTGGAAATAATTGCCAATAAAGGTATTGAACCCTTTTATA GGGGTGAGTTAACTAATTCTATGGTAAAGTTTATTCAGGACAATGGTGGAATTGTTACGG TCGAAGATTTCGGAAATTATTCAACGGTTTTCGCGGATGCTCTGCATACATCCTACAGAG GCCATGATGTGTATACATGCACCCTGCCGACGAGTGGACCTGCTTTAATTGAGGGCCTCA ACATTCTTGATGGTTATCCTTTAAACACACCTTCTTTAGCATTTCCTAAGCGTCTCCATT TAGAAGTTGAAGCAATGAAATGGCTTTCTGCAGGCAGAACTCAATTCGGTGATCCAGATT TTTTACCTCTTGATCATTTGGATGTTGTATCAAAATTGCTCTCTAAAGAGTTTGCGTCTC AAATTCGCAATAACATCTCCCTTAGTAAAACATACCCTTGGGAACATTACAATCCTTCTT ACGATCTTCCTATAAGTCATGGTACCACCCACGTTTCCACTGTGGACAGCAACAACTTGG CAGTTTCAATAACCTCTACTGTAAATCTCCTTTTCGGCTCACAATTGATGGATCCAGTTA CAGGTGTTGTCTTTAACGATCAAATGGACGATTTTTCCATACCAGGTGCTTCTAATGCAT TTAACTTGTCCCCTTCTCCTTGGAACTTTATTGAGCCATTTAAGCGGCCTCAGTCTTCTT CAGCACCAACCATCCTTACCGATATAAATGGAGATTTTGAGATGGCTCTGGGTGCTAGCG GTGGTAGCCGTATTGTCACCGCTGTCCTTGACTCCATCATAAAGCGAATTGACATGGACT ATGATATAGAATCGATGGTTGCCAGTGCTCGTCCTCATCATCAATTATTACCTGATATTT TAATCCTTGAATCAGGCTTCTCCAAATCAGTTGCTACTCGTATGAAAAAATACGGTCATA AAGTCTGGCGACTGAAGCAGCATGACACACCGTTGAGTCAAATTCAAGCCGTTACAAGGC ATCACAGTGAGTATTACGGAATGAGTGATCCTAGGAAGTACGGTCAGGCTGCCGCTTATT AAGTAGGAAATTTTTTTTTGATGCCAGTTTTGTTATTAAAGAGTTTTATGATGTAGCCAA GTGTTTGGCAAGCTTTGTGCTGTGATGTGATGAGGATGAAACCATATGGTACATTTAAAG CGTATGAGAAATCGTCAACGATTGAATATGTTTAAATTAATATTTTAAATTAATCATTTT ATTAAAGACAAA
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  • Fasta :-

    MSPTDTTPLLYSWDDQSRHQDPDWHKLRNYHGAWYRRISRRRFSQFIFAFGLMTLFVLVY SISSNLHTPTQFTGHKVRGRRGAVASEVPVCSDIGVSMLADGGNAVDAAIASTFCIGVVN FFSSGIGGGGFMLIKHPNETAQSLTFREIAPGNVSKHMFDKNPMLAQVGPLSIAIPGELA GLYEAWKSHGLLDWSKLLEPNVKLAREGFPVTRAMERVLKLPEMAHLLKDPIWQPILMPN GKVLRAGDKMFRPAYAKTLEIIANKGIEPFYRGELTNSMVKFIQDNGGIVTVEDFGNYST VFADALHTSYRGHDVYTCTLPTSGPALIEGLNILDGYPLNTPSLAFPKRLHLEVEAMKWL SAGRTQFGDPDFLPLDHLDVVSKLLSKEFASQIRNNISLSKTYPWEHYNPSYDLPISHGT THVSTVDSNNLAVSITSTVNLLFGSQLMDPVTGVVFNDQMDDFSIPGASNAFNLSPSPWN FIEPFKRPQSSSAPTILTDINGDFEMALGASGGSRIVTAVLDSIIKRIDMDYDIESMVAS ARPHHQLLPDILILESGFSKSVATRMKKYGHKVWRLKQHDTPLSQIQAVTRHHSEYYGMS DPRKYGQAAAY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC56E4.06c490 SKRPQSSSAP0.99unspSPAC56E4.06c490 SKRPQSSSAP0.99unspSPAC56E4.06c490 SKRPQSSSAP0.99unspSPAC56E4.06c12 SPLLYSWDDQ0.992unspSPAC56E4.06c39 SYRRISRRRF0.996unsp

SPAC56E4.06c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India