SPAC5H10.02c | glyoxylase III Hsp3102

_IDPredictionOTHERSPmTPCS_Position
SPAC5H10.02cOTHER0.9920200.0034220.004558
No Results

  • Fasta :-

    >SPAC5H10.02c MSIAKGKNALLVASSYYGPFYPDGKNTGVHFSELLIPYNVFKKAGFNVQFVSENGSYKFD DHSIEESKLGDFERKVFNDKNDDFWTNLNNMKKASDIVGKDYQLLFVAGGHAAMFDLPKA TNLQAVAREVFTNGGVLSAVCHGPVLLANVKNPQSVEGKTVVYHKHVTAFNKAGEEKMGV MDELKKRGMKSLNEIFAEAGATFIDPPNPNVNFTQIDGKIVTGVNPQSAKSTAEAAVSAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/558 Sequence name : 558 Sequence length : 240 VALUES OF COMPUTED PARAMETERS Coef20 : 3.800 CoefTot : -0.834 ChDiff : 0 ZoneTo : 22 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.194 1.412 0.166 0.555 MesoH : -0.424 0.325 -0.403 0.226 MuHd_075 : 7.443 6.366 1.789 1.727 MuHd_095 : 10.004 5.593 3.276 2.147 MuHd_100 : 11.526 8.890 3.993 3.280 MuHd_105 : 14.372 11.931 4.395 4.538 Hmax_075 : 9.500 6.600 0.942 4.220 Hmax_095 : 8.750 5.600 1.362 3.185 Hmax_100 : 13.100 13.000 2.329 5.680 Hmax_105 : 13.100 13.000 2.329 5.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9489 0.0511 DFMC : 0.9353 0.0647
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 240 SPAC5H10.02c MSIAKGKNALLVASSYYGPFYPDGKNTGVHFSELLIPYNVFKKAGFNVQFVSENGSYKFDDHSIEESKLGDFERKVFNDK 80 NDDFWTNLNNMKKASDIVGKDYQLLFVAGGHAAMFDLPKATNLQAVAREVFTNGGVLSAVCHGPVLLANVKNPQSVEGKT 160 VVYHKHVTAFNKAGEEKMGVMDELKKRGMKSLNEIFAEAGATFIDPPNPNVNFTQIDGKIVTGVNPQSAKSTAEAAVSAL 240 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC5H10.02c 5 --MSIAK|GK 0.071 . SPAC5H10.02c 7 MSIAKGK|NA 0.071 . SPAC5H10.02c 25 PFYPDGK|NT 0.069 . SPAC5H10.02c 42 IPYNVFK|KA 0.087 . SPAC5H10.02c 43 PYNVFKK|AG 0.113 . SPAC5H10.02c 58 SENGSYK|FD 0.088 . SPAC5H10.02c 68 HSIEESK|LG 0.063 . SPAC5H10.02c 74 KLGDFER|KV 0.129 . SPAC5H10.02c 75 LGDFERK|VF 0.088 . SPAC5H10.02c 80 RKVFNDK|ND 0.058 . SPAC5H10.02c 92 TNLNNMK|KA 0.081 . SPAC5H10.02c 93 NLNNMKK|AS 0.162 . SPAC5H10.02c 100 ASDIVGK|DY 0.072 . SPAC5H10.02c 119 AMFDLPK|AT 0.062 . SPAC5H10.02c 128 NLQAVAR|EV 0.187 . SPAC5H10.02c 151 VLLANVK|NP 0.057 . SPAC5H10.02c 159 PQSVEGK|TV 0.084 . SPAC5H10.02c 165 KTVVYHK|HV 0.085 . SPAC5H10.02c 172 HVTAFNK|AG 0.072 . SPAC5H10.02c 177 NKAGEEK|MG 0.062 . SPAC5H10.02c 185 GVMDELK|KR 0.059 . SPAC5H10.02c 186 VMDELKK|RG 0.079 . SPAC5H10.02c 187 MDELKKR|GM 0.165 . SPAC5H10.02c 190 LKKRGMK|SL 0.242 . SPAC5H10.02c 219 FTQIDGK|IV 0.086 . SPAC5H10.02c 230 VNPQSAK|ST 0.088 . ____________________________^_________________

  • Fasta :-

    >SPAC5H10.02c GGTAAATTAGGTAAACACTTACGCACTTCTATTATTACTTCTTTACAGAAACATTATTTA CCGAACGAGAAGGTATCGTTCTTTAGCATTTTCTGTTTTGACATGCCGTTAAATGCAGGA TGATTAAAATACTTGTAAATGCGTTCTGTGCGTGAGAGCATACTAACAAGCTTGGCCGTT TCATGAAAAAAAAGGTTAAATGAGCTTCAGCAAAACGCAGTTAAAACGTTCATCAATTCC TTCTAATTATATTGATAATCCAATGTTTGCAAGGAAACAAATTTCTTATCTGTATTGAAC CTTTTTGTAATTTACTATTAGACACTACTAGATCTTTTTCTGTATTCTCAGCAACGTAGA AACGAAAACCCGAGAAATCTCGTCTGTCTGTTAACCTGATGTAAACCTCAAAGACGGGGT CACCTTTCCTAGCTTTATTCATTAGGTTTGCGTAATAATTTACTGCTTCAACAACTTTAG AACAATGCTTCTATTGAAGTTTTGCTAATTAAACAACCAGTTCACAAAAAAATGATATAA AATCAAAAAAGAAGGAGCCTACAGCACCCCGGATTCCCATGTTGTCTCCAACCATAGTAC TAACGAGGCCCTCAGACGCTTAACTGCAGTGATCGGACGGGAACTGGTGTTTTCGCCTAG GTATGGCCGTAGACATTTGGATCAGTAAATAGCTCTATAAATACTTAAAATGTATTTTAT ATTGTCTACCAGCAGAGCCTGTTTTAAGTGTTGGATCATTGAACACCATCAGGCAAATGG TATACAATAGTCATGAATTGATTTCAATTATGGATATTTAAAACTACATATCTTTTGCTA AGTCATTTTCAGTAAAGGAATGTTTTACCCGAAATCCTTATAATAGAGTTAATGAACTAG CTACAAACGCAAACAAAACACTGTCAAATTTATTAGCCTCCTAGTGACGTTACATAGTCT ATCAAGGGTCTAGTCATGGTTTTAACCGATTAGAAAGTAGTTTTTTATACAATATATTTA AAGCCTCGTTTTTTGTTACACAAGTGTGTAAAAACCTCATTAGTCCTTGTTGTCATCTAG AAAAGTACTTAAGGTTCTTCCGTACAGCAGGAATCTTTACATAGTAGAAATTGCTATATG ATATAGAATGACATCTATTGAATGCAACAACAATCGACCCTAGAACAGCTTCGAATTTCA TGACTTCATATTTTGTAATATGGTAGGAGCATGATTTTTTGTGTTGATTTAAAGATTGAA TAGTGTATATATATATATATATCTTTACATCTACGAAACGTTGAATTGATTTTATATCAA TAATATCGATCATTTTTATTCTATTATTTGTTTGTTTGCTTGGCTTTCATCTATTTCTAC AGACTATCTTTCCCTAATGTCTATTGCAAAAGGAAAAAATGCATTGCTTGTTGCCAGCAG TTATTATGGCCCATTTTATCCAGATGGTAAAAACACTGGAGTCCATTTTTCAGAGCTTTT AATCCCTTACAATGTTTTCAAAAAAGCAGGTTTTAACGTGCAATTCGTTTCAGAAAATGG CTCTTACAAATTTGACGATCATTCCATTGAGGAGTCAAAATTAGGGGACTTTGAAAGAAA AGTATTTAATGATAAAAACGACGATTTTTGGACTAATCTTAACAATATGAAAAAGGCTTC GGACATAGTTGGAAAAGACTATCAGCTTTTATTTGTGGCAGGTGGGCATGCTGCGATGTT TGACTTACCCAAAGCCACGAATTTACAGGCGGTAGCAAGAGAAGTGTTTACAAATGGTGG TGTTTTATCGGCAGTCTGTCATGGCCCTGTTTTGCTTGCCAATGTAAAGAATCCACAATC AGTTGAAGGCAAAACAGTCGTGTATCATAAGCATGTTACAGCTTTTAATAAGGCTGGAGA GGAAAAAATGGGTGTTATGGATGAATTGAAAAAACGAGGGATGAAATCCTTAAATGAAAT ATTTGCTGAAGCAGGGGCAACTTTCATTGATCCACCAAACCCCAATGTCAACTTTACTCA GATCGATGGAAAAATTGTAACAGGGGTAAATCCGCAGAGCGCAAAATCGACTGCTGAAGC CGCCGTTAGCGCATTATAAAAATTATGTTGTTTGTTGTTATGAGTTATACGAAATAAATA AAAAGAAAAACATTGGAAGATAATTTTTTCGCAGATCTGCTGTTCATTAAAAGTGATGCT TATGCTCAAGTGAAGCATTGCTAATTTGCGATACTGTTTTATAAATATTATAAATTTAGT ACTACAACTTTTGC
  • Download Fasta

  • Fasta :-

    MSIAKGKNALLVASSYYGPFYPDGKNTGVHFSELLIPYNVFKKAGFNVQFVSENGSYKFD DHSIEESKLGDFERKVFNDKNDDFWTNLNNMKKASDIVGKDYQLLFVAGGHAAMFDLPKA TNLQAVAREVFTNGGVLSAVCHGPVLLANVKNPQSVEGKTVVYHKHVTAFNKAGEEKMGV MDELKKRGMKSLNEIFAEAGATFIDPPNPNVNFTQIDGKIVTGVNPQSAKSTAEAAVSAL

  • title: conserved cys residue
  • coordinates: C141
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC5H10.02c63 SFDDHSIEES0.997unspSPAC5H10.02c231 SQSAKSTAEA0.995unsp

SPAC5H10.02c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India