SPAC664.09 | gamma-glutamyltranspeptidase Ggt1

_IDPredictionOTHERSPmTPCS_Position
SPAC664.09OTHER0.9944560.0009920.004552
No Results

  • Fasta :-

    >SPAC664.09 MGINTSSAQSSGAASIARSSVNVKSGNRHLSSNKKSATSALEERASRPSILVTFLVLAGT ILSLYIWPILSPDLFFANQRCSFKYKNKGSQRVVVEGKNGVVATEEETCSQIGVGILKAG GNAVDAAIASGICIGAVNSFSSGIGGGGFMLIRHPNGTAHSLNFRETAPAGASKNMFHGN STLSQVGGLSVAVPGEIAGYERAWKMYGSLPWHKLFEPTIRLMRDGMPMPKELASRIRRP EFSYFKTHPDWSKIFAPEGVFLHVGEKFYRPALASTLEEIAKFGPEVFYTGKIAERLVKF VQQQGGILTMEDMANFSVVVEEPIYGNFYDREVITCGSPCSGEALILGLNVLSKVDLSEG TSILGCEMTDIGVHHLIETMKWMSAGRTVLADPTFYNNTDHVEQLLSLEYADEIRNNISN ERTFDFTHYKAEYDFPNDHGTTHLSVIDKDNMAVGLTASINLMFGSQLLEPETGIILNDH MDDFASPGIVNAFGLSPSPYNFIAPGKRPQSSAVPTILVYNGEVEMVLGGSGGSRIVTAV LDTIIKKYKWGKSLLESVESPRFHHQLMPNIVYIDETVEIEVLRALEKFGHIVDLIPVQY PFSEIQAVFRTNGTLYGLSDSRKQAVAAAY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/827 Sequence name : 827 Sequence length : 630 VALUES OF COMPUTED PARAMETERS Coef20 : 4.554 CoefTot : 0.685 ChDiff : -10 ZoneTo : 41 KR : 5 DE : 0 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.182 2.447 0.450 0.834 MesoH : 0.190 0.522 -0.172 0.313 MuHd_075 : 41.298 22.815 11.271 9.276 MuHd_095 : 25.551 15.990 6.307 7.131 MuHd_100 : 27.808 16.991 7.097 7.550 MuHd_105 : 32.118 18.978 7.519 8.177 Hmax_075 : 12.483 12.250 2.610 4.340 Hmax_095 : 2.275 2.887 -2.061 2.240 Hmax_100 : 2.000 4.500 -2.139 2.740 Hmax_105 : 3.267 12.300 2.610 4.340 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2076 0.7924 DFMC : 0.1929 0.8071 This protein is probably imported in chloroplast. f(Ser) = 0.2927 f(Arg) = 0.0488 CMi = 2.11640 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 630 SPAC664.09 MGINTSSAQSSGAASIARSSVNVKSGNRHLSSNKKSATSALEERASRPSILVTFLVLAGTILSLYIWPILSPDLFFANQR 80 CSFKYKNKGSQRVVVEGKNGVVATEEETCSQIGVGILKAGGNAVDAAIASGICIGAVNSFSSGIGGGGFMLIRHPNGTAH 160 SLNFRETAPAGASKNMFHGNSTLSQVGGLSVAVPGEIAGYERAWKMYGSLPWHKLFEPTIRLMRDGMPMPKELASRIRRP 240 EFSYFKTHPDWSKIFAPEGVFLHVGEKFYRPALASTLEEIAKFGPEVFYTGKIAERLVKFVQQQGGILTMEDMANFSVVV 320 EEPIYGNFYDREVITCGSPCSGEALILGLNVLSKVDLSEGTSILGCEMTDIGVHHLIETMKWMSAGRTVLADPTFYNNTD 400 HVEQLLSLEYADEIRNNISNERTFDFTHYKAEYDFPNDHGTTHLSVIDKDNMAVGLTASINLMFGSQLLEPETGIILNDH 480 MDDFASPGIVNAFGLSPSPYNFIAPGKRPQSSAVPTILVYNGEVEMVLGGSGGSRIVTAVLDTIIKKYKWGKSLLESVES 560 PRFHHQLMPNIVYIDETVEIEVLRALEKFGHIVDLIPVQYPFSEIQAVFRTNGTLYGLSDSRKQAVAAAY 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC664.09 18 GAASIAR|SS 0.148 . SPAC664.09 24 RSSVNVK|SG 0.099 . SPAC664.09 28 NVKSGNR|HL 0.076 . SPAC664.09 34 RHLSSNK|KS 0.058 . SPAC664.09 35 HLSSNKK|SA 0.241 . SPAC664.09 44 TSALEER|AS 0.108 . SPAC664.09 47 LEERASR|PS 0.184 . SPAC664.09 80 LFFANQR|CS 0.081 . SPAC664.09 84 NQRCSFK|YK 0.074 . SPAC664.09 86 RCSFKYK|NK 0.105 . SPAC664.09 88 SFKYKNK|GS 0.073 . SPAC664.09 92 KNKGSQR|VV 0.140 . SPAC664.09 98 RVVVEGK|NG 0.060 . SPAC664.09 118 IGVGILK|AG 0.067 . SPAC664.09 153 GGFMLIR|HP 0.084 . SPAC664.09 165 AHSLNFR|ET 0.112 . SPAC664.09 174 APAGASK|NM 0.075 . SPAC664.09 202 EIAGYER|AW 0.091 . SPAC664.09 205 GYERAWK|MY 0.150 . SPAC664.09 214 GSLPWHK|LF 0.066 . SPAC664.09 221 LFEPTIR|LM 0.112 . SPAC664.09 224 PTIRLMR|DG 0.250 . SPAC664.09 231 DGMPMPK|EL 0.058 . SPAC664.09 236 PKELASR|IR 0.086 . SPAC664.09 238 ELASRIR|RP 0.084 . SPAC664.09 239 LASRIRR|PE 0.488 . SPAC664.09 246 PEFSYFK|TH 0.053 . SPAC664.09 253 THPDWSK|IF 0.066 . SPAC664.09 267 FLHVGEK|FY 0.073 . SPAC664.09 270 VGEKFYR|PA 0.100 . SPAC664.09 282 TLEEIAK|FG 0.074 . SPAC664.09 292 EVFYTGK|IA 0.067 . SPAC664.09 296 TGKIAER|LV 0.123 . SPAC664.09 299 IAERLVK|FV 0.280 . SPAC664.09 331 YGNFYDR|EV 0.128 . SPAC664.09 354 GLNVLSK|VD 0.065 . SPAC664.09 381 HLIETMK|WM 0.085 . SPAC664.09 387 KWMSAGR|TV 0.101 . SPAC664.09 415 EYADEIR|NN 0.092 . SPAC664.09 422 NNISNER|TF 0.068 . SPAC664.09 430 FDFTHYK|AE 0.067 . SPAC664.09 449 HLSVIDK|DN 0.109 . SPAC664.09 507 NFIAPGK|RP 0.056 . SPAC664.09 508 FIAPGKR|PQ 0.189 . SPAC664.09 535 GGSGGSR|IV 0.202 . SPAC664.09 546 VLDTIIK|KY 0.054 . SPAC664.09 547 LDTIIKK|YK 0.085 . SPAC664.09 549 TIIKKYK|WG 0.071 . SPAC664.09 552 KKYKWGK|SL 0.097 . SPAC664.09 562 ESVESPR|FH 0.118 . SPAC664.09 584 VEIEVLR|AL 0.114 . SPAC664.09 588 VLRALEK|FG 0.066 . SPAC664.09 610 EIQAVFR|TN 0.107 . SPAC664.09 622 YGLSDSR|KQ 0.064 . SPAC664.09 623 GLSDSRK|QA 0.131 . ____________________________^_________________

  • Fasta :-

    >SPAC664.09 CGATCAATTGGGATTTTCGAAGGATCTACCTATCGATTTAGAAATTTTTTGCCAATATGC GGTTTTTAAAAACAAAAGATATGAAAGATATTTTAGTCAGTAAAATGCATTTGTTAGTTT TGCCGGCTTCACAGTCAAAACCATGTTTTCGGTTGTATAAATTAGATATGTGGTTTGCTC CACCAATTTGCCTCCCGCTTATTTCTCTCAACTTGCACGCACACAGCAAACTCGAGCCGT TCTCTTGAGAAGCAAGGATTTCTTCCGTTGAATTTATTTAAAGCTAACGCTATTCAATTA TTGATTAGCCTTGTTGATTTCTTCATGCTAATATCGTAAAAAAAAGGTGTAGAAGTTGCG GTTGGCTTTCTTTAGTCCATTTTGGGTCATTTTTCCCCAAAAATTAAATTTGTTAAATTA GAAGTTCTTTTCATTTTCTTCATCCATACCCTCTTCTCAAAGGTTTTGTGCAAGATTCCT TAATCTTGGTAAAGGTATTTTTTTTAAATTTAATTTCATTCCATTTCATACCTTGTTTTT TTTTTTTTGGATATTTTCAGCACTTTTTAAATTGTGATGGGTATCAATACGTCTTCTGCT CAGAGTTCAGGGGCTGCTTCCATCGCTCGAAGTTCTGTAAATGTGAAGTCTGGAAATCGG CATTTATCATCTAATAAGAAATCAGCCACTTCAGCTCTAGAAGAACGGGCTTCTCGTCCC TCTATTCTTGTCACATTTCTTGTTTTGGCAGGCACAATACTTTCTTTATACATCTGGCCA ATTTTATCTCCCGACCTTTTTTTTGCAAATCAACGGTGCTCCTTCAAATATAAAAACAAA GGCTCGCAGAGAGTAGTAGTTGAAGGAAAAAATGGAGTTGTGGCTACGGAGGAAGAGACA TGCTCCCAAATTGGTGTTGGCATCTTGAAGGCCGGTGGAAATGCAGTGGATGCGGCTATC GCATCGGGAATTTGCATTGGAGCTGTCAATTCATTTTCAAGTGGTATTGGCGGTGGTGGA TTTATGTTAATACGCCATCCAAATGGTACAGCACATTCCTTGAACTTTCGCGAGACTGCT CCAGCGGGTGCCAGCAAAAATATGTTTCATGGTAACTCTACCCTGTCACAGGTAGGTGGT CTTTCCGTTGCCGTCCCTGGTGAAATTGCTGGCTACGAGCGTGCTTGGAAAATGTATGGC TCTCTACCTTGGCATAAGTTGTTTGAACCAACCATACGTCTTATGAGAGATGGAATGCCA ATGCCCAAGGAACTTGCGTCTCGCATCAGACGACCCGAGTTTTCCTATTTCAAGACTCAT CCAGATTGGTCTAAAATATTTGCTCCAGAAGGTGTTTTTTTACACGTTGGAGAAAAGTTT TATCGGCCTGCTCTAGCGTCTACCCTCGAAGAAATAGCTAAGTTTGGTCCTGAAGTGTTT TACACAGGAAAAATTGCAGAAAGGCTTGTAAAGTTTGTTCAACAGCAAGGAGGTATACTA ACCATGGAGGATATGGCCAATTTTTCAGTTGTTGTGGAGGAACCTATTTATGGTAACTTC TATGATCGTGAGGTTATTACTTGTGGATCCCCTTGTAGTGGAGAGGCTTTGATTTTAGGT TTAAATGTTCTTTCAAAAGTAGATTTAAGTGAAGGTACTTCTATCCTTGGTTGTGAAATG ACGGATATTGGCGTGCACCATCTAATTGAAACAATGAAATGGATGTCCGCTGGACGGACT GTATTAGCAGACCCAACTTTTTACAATAATACAGATCATGTTGAACAGTTACTTTCTTTG GAATATGCTGATGAAATTCGCAATAATATTTCTAACGAGAGGACTTTTGATTTTACTCAC TACAAGGCCGAATACGATTTCCCTAACGATCACGGCACTACTCATCTTTCCGTTATCGAC AAAGACAATATGGCAGTCGGACTCACAGCTTCTATCAATTTGATGTTTGGTTCACAACTT TTGGAACCTGAAACGGGTATTATACTGAATGATCACATGGACGATTTTGCTTCTCCAGGA ATAGTGAATGCTTTCGGTTTGAGTCCATCGCCATACAACTTTATTGCCCCTGGTAAGCGA CCACAAAGCTCCGCGGTGCCTACGATTTTGGTATATAATGGTGAAGTTGAAATGGTTCTT GGTGGTAGCGGTGGCAGCCGAATCGTGACAGCTGTGTTAGACACAATTATTAAAAAATAT AAATGGGGCAAGTCATTGTTAGAATCTGTTGAGAGTCCTAGATTTCATCATCAGCTAATG CCTAATATCGTCTATATCGATGAAACTGTTGAAATTGAAGTTCTTAGAGCTTTAGAAAAG TTTGGTCATATAGTGGATTTAATCCCCGTTCAATATCCTTTCAGTGAAATTCAAGCTGTT TTCCGCACCAACGGCACATTGTACGGTTTAAGTGATAGCCGAAAACAGGCTGTTGCTGCT GCCTATTAAAATTTCACTAAATTATTAAAAAAAACTCCTTAGACGCTCACAAAATTTTCC TTTATTTGTTGTTATTAATTTATCAGGTTTATTAACTTATTCTCAATCTTTATGTGCTTT TTACTGATCTTTAGCTTGTGGCTGGGATGAGAGAAAAATATTATAAAGCATAAAACGTAT GAATGATCACTGTCTACATATTTGTGCACATGATGGTGATGATTGGACCTTCGTTAGTTA GATAGATTACATTCTTTCCTAGATTTAGAAAGTTTTAGCAAAACGAAGAACAATTACATT TAACTTTCGAATTTATTCTAAC
  • Download Fasta

  • Fasta :-

    MGINTSSAQSSGAASIARSSVNVKSGNRHLSSNKKSATSALEERASRPSILVTFLVLAGT ILSLYIWPILSPDLFFANQRCSFKYKNKGSQRVVVEGKNGVVATEEETCSQIGVGILKAG GNAVDAAIASGICIGAVNSFSSGIGGGGFMLIRHPNGTAHSLNFRETAPAGASKNMFHGN STLSQVGGLSVAVPGEIAGYERAWKMYGSLPWHKLFEPTIRLMRDGMPMPKELASRIRRP EFSYFKTHPDWSKIFAPEGVFLHVGEKFYRPALASTLEEIAKFGPEVFYTGKIAERLVKF VQQQGGILTMEDMANFSVVVEEPIYGNFYDREVITCGSPCSGEALILGLNVLSKVDLSEG TSILGCEMTDIGVHHLIETMKWMSAGRTVLADPTFYNNTDHVEQLLSLEYADEIRNNISN ERTFDFTHYKAEYDFPNDHGTTHLSVIDKDNMAVGLTASINLMFGSQLLEPETGIILNDH MDDFASPGIVNAFGLSPSPYNFIAPGKRPQSSAVPTILVYNGEVEMVLGGSGGSRIVTAV LDTIIKKYKWGKSLLESVESPRFHHQLMPNIVYIDETVEIEVLRALEKFGHIVDLIPVQY PFSEIQAVFRTNGTLYGLSDSRKQAVAAAY

    No Results
IDSitePositionGscoreIscore
SPAC664.09T50.5350.051
IDSitePositionGscoreIscore
SPAC664.09T50.5350.051
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC664.0939 SKSATSALEE0.995unspSPAC664.09557 SSLLESVESP0.992unsp

SPAC664.09      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India