SPAC6G10.04c | 20S proteasome complex subunit alpha 6 subunit Pre5 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC6G10.04cOTHER0.9998160.0000150.000169
No Results

  • Fasta :-

    >SPAC6G10.04c MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINT QEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFP DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLDKLGDKG PAAARASRAAAEEPQAPTAEAILDSADAMETD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/318 Sequence name : 318 Sequence length : 272 VALUES OF COMPUTED PARAMETERS Coef20 : 3.390 CoefTot : -0.311 ChDiff : -7 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.965 1.359 0.007 0.481 MesoH : -1.102 0.147 -0.502 0.101 MuHd_075 : 27.794 11.094 5.831 4.983 MuHd_095 : 21.794 7.735 2.407 5.251 MuHd_100 : 20.027 6.450 2.303 4.827 MuHd_105 : 9.442 2.072 0.959 2.240 Hmax_075 : 1.400 -3.967 -2.720 0.863 Hmax_095 : -2.100 -2.713 -3.840 1.978 Hmax_100 : -2.300 -3.300 -3.275 1.620 Hmax_105 : -4.200 -5.000 -3.928 0.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9572 0.0428 DFMC : 0.9398 0.0602
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 272 SPAC6G10.04c MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQKKLIRIDDHIGIAIAGLAPD 80 ARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTS 160 MGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLDKLGDKG 240 PAAARASRAAAEEPQAPTAEAILDSADAMETD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC6G10.04c 3 ----MFR|NQ 0.100 . SPAC6G10.04c 18 TWSPQGR|LH 0.109 . SPAC6G10.04c 30 YALEAIK|QG 0.060 . SPAC6G10.04c 41 TVGLVSK|TH 0.056 . SPAC6G10.04c 50 AVLVALK|RN 0.057 . SPAC6G10.04c 51 VLVALKR|NA 0.156 . SPAC6G10.04c 61 ELSSYQK|KL 0.073 . SPAC6G10.04c 62 LSSYQKK|LI 0.152 . SPAC6G10.04c 65 YQKKLIR|ID 0.097 . SPAC6G10.04c 82 GLAPDAR|VL 0.125 . SPAC6G10.04c 89 VLSNYMK|QE 0.065 . SPAC6G10.04c 96 QEALSSK|TL 0.064 . SPAC6G10.04c 101 SKTLFTR|PI 0.092 . SPAC6G10.04c 106 TRPIPVR|RL 0.097 . SPAC6G10.04c 107 RPIPVRR|LM 0.179 . SPAC6G10.04c 111 VRRLMSK|VA 0.092 . SPAC6G10.04c 115 MSKVAEK|AQ 0.063 . SPAC6G10.04c 125 NTQEYGR|RP 0.079 . SPAC6G10.04c 126 TQEYGRR|PY 0.184 . SPAC6G10.04c 164 GTSMGSR|SQ 0.144 . SPAC6G10.04c 169 SRSQSAR|TY 0.141 . SPAC6G10.04c 174 ARTYIER|NL 0.102 . SPAC6G10.04c 184 TFPDSSR|EE 0.062 . SPAC6G10.04c 193 LILSALR|AL 0.073 . SPAC6G10.04c 196 SALRALR|DT 0.204 . SPAC6G10.04c 201 LRDTLSK|DQ 0.072 . SPAC6G10.04c 217 SISVIGK|DE 0.075 . SPAC6G10.04c 220 VIGKDEK|YT 0.062 . SPAC6G10.04c 230 YDQNDTK|EW 0.069 . SPAC6G10.04c 235 TKEWLDK|LG 0.073 . SPAC6G10.04c 239 LDKLGDK|GP 0.063 . SPAC6G10.04c 245 KGPAAAR|AS 0.091 . SPAC6G10.04c 248 AAARASR|AA 0.325 . ____________________________^_________________

  • Fasta :-

    >SPAC6G10.04c CGCAGGGCTACGAGATTATTAGAAACATTAGCTGAACGTGACCAGAACCAATATGTTTAG AAATCAATATGATGGAGATGCGACTACGTGGAGCCCTCAAGGAAGACTCCATCAAGTAGA ATACGCATTAGAAGCTATTAAACAAGGATCAGCTACGGTTGGACTCGTTTCCAAAACACA TGCTGTTCTAGTCGCTTTAAAGAGAAACGCAGAGGAACTTAGCAGCTACCAAAAGAAGTT GATTCGCATTGATGACCATATTGGTATTGCTATAGCTGGTTTGGCTCCTGACGCCAGAGT TTTGAGTAACTATATGAAGCAAGAAGCTTTATCGTCTAAGACTTTGTTTACTCGACCTAT TCCTGTCCGTCGTCTAATGAGCAAGGTTGCTGAAAAGGCTCAAATTAATACTCAGGAGTA CGGAAGGAGACCTTATGGTGTTGGGTTTTTAGTAATTGGGTACGATGAAAGTGGTCCACA TTTACTCGAGTTTCAACCTTCTGGCCTTGTTCTAGAATATTTGGGTACTAGTATGGGTTC ACGATCCCAGTCTGCTCGTACTTACATAGAGCGAAATTTGGATACATTTCCGGATTCTAG CAGAGAAGAACTTATCCTCTCAGCACTTAGAGCTTTACGTGATACTCTTTCAAAAGACCA AGAACTGACCGAAGAAAACGTTTCTATATCCGTCATTGGAAAAGATGAAAAATATACTCT TTACGATCAAAATGACACAAAAGAATGGCTTGATAAATTAGGCGACAAAGGTCCCGCGGC TGCTCGTGCTTCTAGGGCTGCCGCCGAAGAACCTCAAGCGCCTACTGCGGAGGCTATACT TGACTCTGCTGATGCCATGGAAACTGATTAATTGCCATGATTCAAATGATACCTTTCTTA AGTACATATGTCATAGAATTCCGAAAAGATGATTATCCTTTATAGGGATTTTTCTTAGCT ATCCTTTTTATTCCTTCGACAATTACGATTTCTGGCATGTCATTTCCAAGCTATTAAGTT GCTGGATAGAAATCTAGGAAATTTAATGAAAAATAAATGTTAACTTTGTGCATAGGAA
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  • Fasta :-

    MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINT QEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFP DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLDKLGDKG PAAARASRAAAEEPQAPTAEAILDSADAMETD

  • title: active site
  • coordinates: S33,L49,R51,K62,S163
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC6G10.04c183 SFPDSSREEL0.996unspSPAC6G10.04c183 SFPDSSREEL0.996unspSPAC6G10.04c183 SFPDSSREEL0.996unspSPAC6G10.04c94 SQEALSSKTL0.992unspSPAC6G10.04c182 STFPDSSREE0.996unsp

SPAC6G10.04c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India