SPBC119.17 | mitochondrial metalloendopeptidase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC119.17OTHER0.8274970.0002330.172271
No Results

  • Fasta :-

    >SPBC119.17 MNYAKLSIAFSKKTIKTHNCRLFQRWLHVGDKVHDFRVVDTKKVPELQLNYTRLKHEPTN ADMIHLDREDPNSVFSIGFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLAT FMNAFTASDFTFYPFATVNTTDYKNLRDVYLDATLFPKLRKLDFLQEGWRFEHADVNDKK SPIIFNGVVYNEMKGQVSDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKF HRSHYHPSNAKILSYGSFPLEDNLSALSETFRPFSKRELNLPNTFLKEFDQEKRVVEYGP LDPVMAPGRQVKTSISFLANDTSNVYETFALKVLSKLCFDGFSSPFYKALIESGLGTDFA PNSGYDSTTKRGIFSVGLEGASEESLAKIENLVYSIFNDLALKGFENEKLEAILHQMEIS LKHKSAHFGIGLAQSLPFNWFNGADPADWLSFNKQIEWLKQKNSDGKLFQKLIKKYILEN KSRFVFTMLPSSTFPQRLQEAEAKKLQERTSKLTDEDIAEIEKTSVKLLEAQSTPADTSC LPTLSVSDIPETIDETKLKFLDIAGMKAQWYDLAAGLTYIRLLLPLKNFPESLIPYLPVY CDACLNLGTHSESIGDLEHQIRRYTGGISISPSAVTNNSDVSKYELGIAISGYALDKNVG KLVELINKAFWNTNLSNTDKLAIMLKTSVSGITDGIAEKGHSFAKVSSASGLTEKTSITE QLGGLTQVKLLSQLSREESFGPLVEKLTAIREILRGTSGFKAAINASPTQHEVVEKALQK FMKSRGVNQQTQTKSTSKERNGINSIKTYHELPFQTYFAAKSCLGVPYTHPDGAPLQILS SLLTHKYLHGEIREKGGAYGAGLSYSGIDGVLSFFTYRDSDPIRSLSVFDEASEWATTHE FSQRDIDEAKLAVFQGIDSPVSESQKGMLYFVDGVTDEMLQNRRKQLLNVSANDLKAVAK KYLVNPKKSYTAVLGPKSEKQLPTWVIDKFES
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/75 Sequence name : 75 Sequence length : 992 VALUES OF COMPUTED PARAMETERS Coef20 : 4.111 CoefTot : -0.618 ChDiff : -4 ZoneTo : 30 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.153 0.128 0.513 MesoH : -0.364 0.351 -0.315 0.241 MuHd_075 : 25.010 14.904 7.069 6.161 MuHd_095 : 36.795 20.189 8.735 9.693 MuHd_100 : 34.113 17.989 9.456 8.135 MuHd_105 : 34.043 12.272 10.082 5.337 Hmax_075 : 4.400 9.800 2.049 2.740 Hmax_095 : 10.500 5.687 -0.059 5.310 Hmax_100 : 7.200 10.500 -0.301 5.310 Hmax_105 : 8.867 7.000 0.027 3.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0894 0.9106 DFMC : 0.1156 0.8844 This protein is probably imported in mitochondria. f(Ser) = 0.0667 f(Arg) = 0.0667 CMi = 0.40816 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 992 SPBC119.17 MNYAKLSIAFSKKTIKTHNCRLFQRWLHVGDKVHDFRVVDTKKVPELQLNYTRLKHEPTNADMIHLDREDPNSVFSIGFQ 80 TPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMNAFTASDFTFYPFATVNTTDYKNLRDVYLDATLFPKLR 160 KLDFLQEGWRFEHADVNDKKSPIIFNGVVYNEMKGQVSDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKF 240 HRSHYHPSNAKILSYGSFPLEDNLSALSETFRPFSKRELNLPNTFLKEFDQEKRVVEYGPLDPVMAPGRQVKTSISFLAN 320 DTSNVYETFALKVLSKLCFDGFSSPFYKALIESGLGTDFAPNSGYDSTTKRGIFSVGLEGASEESLAKIENLVYSIFNDL 400 ALKGFENEKLEAILHQMEISLKHKSAHFGIGLAQSLPFNWFNGADPADWLSFNKQIEWLKQKNSDGKLFQKLIKKYILEN 480 KSRFVFTMLPSSTFPQRLQEAEAKKLQERTSKLTDEDIAEIEKTSVKLLEAQSTPADTSCLPTLSVSDIPETIDETKLKF 560 LDIAGMKAQWYDLAAGLTYIRLLLPLKNFPESLIPYLPVYCDACLNLGTHSESIGDLEHQIRRYTGGISISPSAVTNNSD 640 VSKYELGIAISGYALDKNVGKLVELINKAFWNTNLSNTDKLAIMLKTSVSGITDGIAEKGHSFAKVSSASGLTEKTSITE 720 QLGGLTQVKLLSQLSREESFGPLVEKLTAIREILRGTSGFKAAINASPTQHEVVEKALQKFMKSRGVNQQTQTKSTSKER 800 NGINSIKTYHELPFQTYFAAKSCLGVPYTHPDGAPLQILSSLLTHKYLHGEIREKGGAYGAGLSYSGIDGVLSFFTYRDS 880 DPIRSLSVFDEASEWATTHEFSQRDIDEAKLAVFQGIDSPVSESQKGMLYFVDGVTDEMLQNRRKQLLNVSANDLKAVAK 960 KYLVNPKKSYTAVLGPKSEKQLPTWVIDKFES 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................ 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC119.17 5 --MNYAK|LS 0.061 . SPBC119.17 12 LSIAFSK|KT 0.072 . SPBC119.17 13 SIAFSKK|TI 0.123 . SPBC119.17 16 FSKKTIK|TH 0.061 . SPBC119.17 21 IKTHNCR|LF 0.085 . SPBC119.17 25 NCRLFQR|WL 0.124 . SPBC119.17 32 WLHVGDK|VH 0.057 . SPBC119.17 37 DKVHDFR|VV 0.131 . SPBC119.17 42 FRVVDTK|KV 0.078 . SPBC119.17 43 RVVDTKK|VP 0.086 . SPBC119.17 53 LQLNYTR|LK 0.070 . SPBC119.17 55 LNYTRLK|HE 0.065 . SPBC119.17 68 DMIHLDR|ED 0.075 . SPBC119.17 103 TLCGSNK|YP 0.064 . SPBC119.17 107 SNKYPVR|DP 0.101 . SPBC119.17 112 VRDPFFK|ML 0.087 . SPBC119.17 116 FFKMLNR|SL 0.115 . SPBC119.17 144 VNTTDYK|NL 0.062 . SPBC119.17 147 TDYKNLR|DV 0.127 . SPBC119.17 158 DATLFPK|LR 0.054 . SPBC119.17 160 TLFPKLR|KL 0.097 . SPBC119.17 161 LFPKLRK|LD 0.077 . SPBC119.17 170 FLQEGWR|FE 0.085 . SPBC119.17 179 HADVNDK|KS 0.060 . SPBC119.17 180 ADVNDKK|SP 0.128 . SPBC119.17 194 VVYNEMK|GQ 0.057 . SPBC119.17 233 LAIPDLK|YE 0.063 . SPBC119.17 239 KYEELVK|FH 0.058 . SPBC119.17 242 ELVKFHR|SH 0.097 . SPBC119.17 251 YHPSNAK|IL 0.062 . SPBC119.17 272 ALSETFR|PF 0.117 . SPBC119.17 276 TFRPFSK|RE 0.059 . SPBC119.17 277 FRPFSKR|EL 0.165 . SPBC119.17 287 LPNTFLK|EF 0.083 . SPBC119.17 293 KEFDQEK|RV 0.070 . SPBC119.17 294 EFDQEKR|VV 0.219 . SPBC119.17 309 PVMAPGR|QV 0.129 . SPBC119.17 312 APGRQVK|TS 0.136 . SPBC119.17 332 YETFALK|VL 0.056 . SPBC119.17 336 ALKVLSK|LC 0.073 . SPBC119.17 348 FSSPFYK|AL 0.091 . SPBC119.17 370 GYDSTTK|RG 0.055 . SPBC119.17 371 YDSTTKR|GI 0.320 . SPBC119.17 388 SEESLAK|IE 0.058 . SPBC119.17 403 FNDLALK|GF 0.059 . SPBC119.17 409 KGFENEK|LE 0.056 . SPBC119.17 422 QMEISLK|HK 0.071 . SPBC119.17 424 EISLKHK|SA 0.135 . SPBC119.17 454 DWLSFNK|QI 0.062 . SPBC119.17 460 KQIEWLK|QK 0.061 . SPBC119.17 462 IEWLKQK|NS 0.075 . SPBC119.17 467 QKNSDGK|LF 0.066 . SPBC119.17 471 DGKLFQK|LI 0.062 . SPBC119.17 474 LFQKLIK|KY 0.061 . SPBC119.17 475 FQKLIKK|YI 0.086 . SPBC119.17 481 KYILENK|SR 0.069 . SPBC119.17 483 ILENKSR|FV 0.216 . SPBC119.17 497 SSTFPQR|LQ 0.093 . SPBC119.17 504 LQEAEAK|KL 0.063 . SPBC119.17 505 QEAEAKK|LQ 0.080 . SPBC119.17 509 AKKLQER|TS 0.074 . SPBC119.17 512 LQERTSK|LT 0.135 . SPBC119.17 523 DIAEIEK|TS 0.056 . SPBC119.17 527 IEKTSVK|LL 0.065 . SPBC119.17 557 ETIDETK|LK 0.059 . SPBC119.17 559 IDETKLK|FL 0.096 . SPBC119.17 567 LDIAGMK|AQ 0.060 . SPBC119.17 581 AGLTYIR|LL 0.062 . SPBC119.17 587 RLLLPLK|NF 0.054 . SPBC119.17 622 DLEHQIR|RY 0.098 . SPBC119.17 623 LEHQIRR|YT 0.227 . SPBC119.17 643 NNSDVSK|YE 0.075 . SPBC119.17 657 SGYALDK|NV 0.087 . SPBC119.17 661 LDKNVGK|LV 0.085 . SPBC119.17 668 LVELINK|AF 0.056 . SPBC119.17 680 NLSNTDK|LA 0.073 . SPBC119.17 686 KLAIMLK|TS 0.063 . SPBC119.17 699 TDGIAEK|GH 0.067 . SPBC119.17 705 KGHSFAK|VS 0.088 . SPBC119.17 715 ASGLTEK|TS 0.066 . SPBC119.17 729 GGLTQVK|LL 0.063 . SPBC119.17 736 LLSQLSR|EE 0.123 . SPBC119.17 746 FGPLVEK|LT 0.058 . SPBC119.17 751 EKLTAIR|EI 0.082 . SPBC119.17 755 AIREILR|GT 0.092 . SPBC119.17 761 RGTSGFK|AA 0.066 . SPBC119.17 776 QHEVVEK|AL 0.073 . SPBC119.17 780 VEKALQK|FM 0.060 . SPBC119.17 783 ALQKFMK|SR 0.134 . SPBC119.17 785 QKFMKSR|GV 0.255 . SPBC119.17 794 NQQTQTK|ST 0.110 . SPBC119.17 798 QTKSTSK|ER 0.059 . SPBC119.17 800 KSTSKER|NG 0.095 . SPBC119.17 807 NGINSIK|TY 0.071 . SPBC119.17 821 QTYFAAK|SC 0.098 . SPBC119.17 846 SSLLTHK|YL 0.075 . SPBC119.17 853 YLHGEIR|EK 0.128 . SPBC119.17 855 HGEIREK|GG 0.060 . SPBC119.17 878 LSFFTYR|DS 0.148 . SPBC119.17 884 RDSDPIR|SL 0.185 . SPBC119.17 904 THEFSQR|DI 0.164 . SPBC119.17 910 RDIDEAK|LA 0.070 . SPBC119.17 926 PVSESQK|GM 0.066 . SPBC119.17 943 DEMLQNR|RK 0.069 . SPBC119.17 944 EMLQNRR|KQ 0.075 . SPBC119.17 945 MLQNRRK|QL 0.079 . SPBC119.17 956 VSANDLK|AV 0.073 . SPBC119.17 960 DLKAVAK|KY 0.064 . SPBC119.17 961 LKAVAKK|YL 0.113 . SPBC119.17 967 KYLVNPK|KS 0.065 . SPBC119.17 968 YLVNPKK|SY 0.182 . SPBC119.17 977 TAVLGPK|SE 0.077 . SPBC119.17 980 LGPKSEK|QL 0.062 . SPBC119.17 989 PTWVIDK|FE 0.066 . ____________________________^_________________

  • Fasta :-

    >SPBC119.17 GTTTACTATATAAGAATAAGGAGTTATTCGTCTACTCAGAACCAGCAACCTTGGTTTCCT CAAAATAATGAATTATGCCAAGTTATCGATAGCATTTTCAAAGAAAACCATAAAAACACA CAACTGTCGACTATTTCAGCGATGGCTGCATGTTGGCGACAAAGTCCATGATTTTCGTGT AGTCGATACTAAAAAAGTACCAGAGTTACAGCTTAATTATACTCGTTTGAAACACGAGCC GACCAATGCAGATATGATACATCTGGATCGAGAAGATCCAAATAGCGTTTTCAGCATTGG ATTCCAAACTCCAGCAGAAAACGATGAAGGAATTCCTCATATTTTGGAACACACAACTCT TTGTGGAAGTAATAAGTATCCAGTTCGAGATCCTTTCTTTAAAATGTTGAACCGTAGTTT AGCAACTTTTATGAATGCCTTTACTGCTTCAGATTTTACATTTTATCCTTTTGCAACCGT GAATACTACCGACTATAAAAACCTCCGGGATGTGTATTTAGATGCTACTTTGTTTCCCAA GCTGCGCAAACTAGATTTCTTACAGGAAGGTTGGCGATTCGAACATGCTGACGTTAACGA TAAAAAGTCTCCAATTATTTTTAATGGTGTTGTTTACAATGAAATGAAAGGCCAAGTTTC TGACTCATCTTACATTTTTTATATGCTGTTCCAGCAACATCTTTTTCAGGGAACTGCGTA CGGATTCAACAGTGGAGGTGATCCTTTGGCAATTCCTGATCTTAAGTATGAAGAGCTAGT TAAATTCCACAGATCCCACTATCATCCGTCCAACGCCAAAATTCTTTCGTATGGGTCATT TCCTTTGGAAGATAACTTATCTGCGCTCAGTGAGACATTTCGGCCATTTTCAAAACGAGA GCTAAATTTACCAAACACCTTTTTAAAGGAGTTTGACCAAGAAAAAAGGGTAGTGGAATA TGGTCCCTTAGATCCGGTTATGGCTCCTGGGAGGCAAGTAAAAACCTCAATTTCTTTTCT TGCAAACGATACCTCAAATGTTTATGAAACTTTTGCTCTTAAGGTTCTATCGAAGTTATG TTTTGATGGATTTTCTTCACCGTTTTACAAGGCCTTAATTGAATCAGGTTTGGGTACTGA TTTTGCTCCAAATAGTGGATACGATTCTACCACTAAGAGAGGAATTTTCTCTGTTGGTCT CGAAGGAGCATCTGAGGAATCACTCGCAAAAATTGAAAATCTCGTATATTCTATTTTTAA TGACCTTGCATTGAAGGGATTTGAAAATGAGAAACTGGAGGCAATTTTGCATCAAATGGA GATTTCTTTGAAGCATAAATCTGCACACTTTGGAATTGGTTTAGCTCAATCCTTACCCTT TAACTGGTTTAATGGTGCTGATCCAGCGGATTGGTTATCATTTAATAAGCAAATAGAATG GCTAAAACAAAAGAATAGCGATGGTAAGCTTTTCCAAAAGCTTATTAAGAAATACATCCT TGAGAATAAGTCAAGGTTCGTTTTTACAATGCTTCCCTCCTCCACGTTTCCCCAAAGATT ACAAGAAGCTGAAGCCAAGAAGCTGCAGGAACGAACCTCTAAACTCACGGACGAGGATAT AGCAGAAATTGAGAAGACTAGTGTTAAATTGTTGGAAGCTCAATCAACTCCTGCTGATAC TAGTTGCCTTCCAACTCTGAGTGTCTCTGATATTCCCGAGACTATAGATGAAACTAAACT TAAATTTTTGGATATAGCTGGTATGAAAGCACAGTGGTACGATTTGGCTGCTGGCTTGAC TTATATAAGACTTCTTTTACCCTTGAAAAATTTCCCGGAATCGTTGATACCTTATCTACC CGTATATTGCGATGCCTGCTTAAACTTAGGAACTCATTCTGAAAGCATTGGTGATTTGGA ACACCAAATCCGTAGATACACTGGTGGTATCAGTATTTCTCCATCAGCAGTGACAAACAA CAGTGATGTCTCAAAATATGAACTAGGAATAGCTATCTCTGGTTATGCCTTGGACAAGAA TGTTGGGAAATTGGTGGAATTGATTAACAAAGCGTTTTGGAATACTAATTTATCCAACAC AGACAAGTTAGCAATAATGTTGAAGACGTCGGTTAGTGGAATTACGGATGGAATTGCTGA AAAAGGACATTCATTTGCCAAAGTTTCATCTGCATCAGGTCTCACCGAGAAAACAAGTAT TACTGAACAACTTGGTGGTCTTACTCAAGTAAAGCTGTTAAGCCAGTTATCTAGAGAAGA AAGCTTTGGTCCGTTAGTCGAAAAGCTTACAGCTATTCGTGAAATTTTACGAGGCACATC TGGTTTTAAAGCTGCTATAAACGCAAGCCCTACACAACATGAAGTTGTTGAAAAGGCGTT ACAAAAATTTATGAAGTCACGGGGAGTCAATCAACAAACTCAGACCAAATCGACTTCCAA GGAACGAAATGGTATTAATTCTATTAAAACCTATCATGAATTACCTTTTCAAACCTATTT CGCTGCGAAGTCTTGTTTAGGCGTTCCATATACCCATCCAGATGGAGCACCGCTTCAAAT TCTTTCATCGCTTTTGACACACAAATATCTGCATGGTGAAATTCGTGAGAAAGGAGGCGC ATATGGGGCTGGTCTTTCTTACAGTGGTATAGATGGTGTACTGTCTTTCTTTACTTATCG GGATTCCGATCCAATACGTTCTTTATCAGTTTTTGACGAGGCATCTGAATGGGCAACCAC TCACGAGTTTTCTCAGAGAGATATAGATGAAGCCAAACTAGCAGTATTTCAAGGAATTGA TAGCCCGGTTAGTGAAAGCCAAAAAGGAATGCTTTACTTTGTCGATGGGGTTACAGACGA AATGCTTCAAAATAGGCGAAAGCAGCTACTAAATGTTTCAGCGAATGATTTGAAGGCCGT TGCCAAAAAATATTTGGTAAATCCAAAAAAGAGCTATACCGCTGTTCTTGGCCCCAAGTC AGAGAAGCAATTACCAACGTGGGTGATTGATAAGTTTGAAAGTTGATTATGATACTATTT ATCCTTACTCGAAAAGCAATACGTATTTTTTTTTTTTTTTTTTTGTAAAATGATTTAATG ATTTTAGTGAACGAAAGCAATAATTATTTTGACACTTGAAAGGCAATGTTTAAGCTTCGT TGGAATTTCTCATGAGTTTATTTAAAAGTCGTTTCCGTCGTGGAACAAAAAATTCGTATA GAAGCACGCTCATATAAATCAAACTTCCTCTATATGTAGTAGTTAGTATGCTTTATCTTT ATAATTCACAAGAATGCTGCTATGTTGTTAATACTTTGTAGACAGACAGATAGA
  • Download Fasta

  • Fasta :-

    MNYAKLSIAFSKKTIKTHNCRLFQRWLHVGDKVHDFRVVDTKKVPELQLNYTRLKHEPTN ADMIHLDREDPNSVFSIGFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLAT FMNAFTASDFTFYPFATVNTTDYKNLRDVYLDATLFPKLRKLDFLQEGWRFEHADVNDKK SPIIFNGVVYNEMKGQVSDSSYIFYMLFQQHLFQGTAYGFNSGGDPLAIPDLKYEELVKF HRSHYHPSNAKILSYGSFPLEDNLSALSETFRPFSKRELNLPNTFLKEFDQEKRVVEYGP LDPVMAPGRQVKTSISFLANDTSNVYETFALKVLSKLCFDGFSSPFYKALIESGLGTDFA PNSGYDSTTKRGIFSVGLEGASEESLAKIENLVYSIFNDLALKGFENEKLEAILHQMEIS LKHKSAHFGIGLAQSLPFNWFNGADPADWLSFNKQIEWLKQKNSDGKLFQKLIKKYILEN KSRFVFTMLPSSTFPQRLQEAEAKKLQERTSKLTDEDIAEIEKTSVKLLEAQSTPADTSC LPTLSVSDIPETIDETKLKFLDIAGMKAQWYDLAAGLTYIRLLLPLKNFPESLIPYLPVY CDACLNLGTHSESIGDLEHQIRRYTGGISISPSAVTNNSDVSKYELGIAISGYALDKNVG KLVELINKAFWNTNLSNTDKLAIMLKTSVSGITDGIAEKGHSFAKVSSASGLTEKTSITE QLGGLTQVKLLSQLSREESFGPLVEKLTAIREILRGTSGFKAAINASPTQHEVVEKALQK FMKSRGVNQQTQTKSTSKERNGINSIKTYHELPFQTYFAAKSCLGVPYTHPDGAPLQILS SLLTHKYLHGEIREKGGAYGAGLSYSGIDGVLSFFTYRDSDPIRSLSVFDEASEWATTHE FSQRDIDEAKLAVFQGIDSPVSESQKGMLYFVDGVTDEMLQNRRKQLLNVSANDLKAVAK KYLVNPKKSYTAVLGPKSEKQLPTWVIDKFES

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC119.17642 SNSDVSKYEL0.99unspSPBC119.17642 SNSDVSKYEL0.99unspSPBC119.17642 SNSDVSKYEL0.99unspSPBC119.17735 SLSQLSREES0.996unspSPBC119.17797 STKSTSKERN0.994unspSPBC119.17887 SIRSLSVFDE0.996unspSPBC119.17902 STHEFSQRDI0.998unspSPBC119.17275 SFRPFSKREL0.997unspSPBC119.17613 STHSESIGDL0.996unsp

SPBC577.01      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India