SPBC13G1.08c | Ash2-trithorax family protein

_IDPredictionOTHERSPmTPCS_Position
SPBC13G1.08cOTHER0.9995430.0003400.000117
No Results

  • Fasta :-

    >SPBC13G1.08c MLAHGSNDYGVSLKGNKTGSSPSKASSLNWNEPHTLNEQNTYCYCGKDRNLRFPDLQCSV CLNMFHLSCLSPPCTSMMGFSTNYQFVCKHCTEDGFERFERGVSAWKAITATAMANLVVK RYVETNPDVPVDSFNAEKMRNFQANTYFFKKKEDLIPFIEEHWQLLCPDREKVQTWQATL GSCLVANRDTYRAKDETMRNQNSEYALNNPNLFDFRSGYIFPFQRVGATVPKKRLVETET PPPSSSKLKEDYKDSKREMKRSNTPWSNASIKKNEVPTVPIRYKPPPWRDSDFETVPKLP IFYPNSSSPNFFSLSEIPFNRRGFRYSPCEAAKDLPNVMYREIELPPFTSRINWHDISTP VFIDHSALCATVEKGFRMARSNVFMTSGEWYFEIKIEKGGGDDGAHVRIGVSRREAPLDA PVGYDAYSYGLRDLGGQKVHMSRPRNFMDSFGTGDIIGLHISLPKPSFAQHTTLPSCHDR IPIRYKGQLYFEQPDYVPSKMMDELMIPSKHNRYIDLPYIPGSFIKVYKNGSYMGTAFEN LLDFNPPNSINSNHYSFDDGSLGYYPSISMYGGGIARFQFGPQFSHRPLVLGSNVRPVSE RYNEQIAEDVLCDILDEIDYAEDPNTSSVTIDVPQEPNAGITIIPEIKDITE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/649 Sequence name : 649 Sequence length : 652 VALUES OF COMPUTED PARAMETERS Coef20 : 3.099 CoefTot : -1.330 ChDiff : -5 ZoneTo : 31 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.635 1.253 0.291 0.486 MesoH : -0.369 0.193 -0.305 0.193 MuHd_075 : 18.566 8.068 5.491 3.350 MuHd_095 : 17.813 7.806 5.705 3.240 MuHd_100 : 22.431 7.546 6.639 4.239 MuHd_105 : 22.631 9.073 7.489 4.700 Hmax_075 : 11.200 4.783 -1.001 2.660 Hmax_095 : 5.862 -1.000 0.269 1.391 Hmax_100 : 0.900 2.100 0.655 0.880 Hmax_105 : 2.200 -0.700 -1.915 1.738 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9900 0.0100 DFMC : 0.9477 0.0523
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 652 SPBC13G1.08c MLAHGSNDYGVSLKGNKTGSSPSKASSLNWNEPHTLNEQNTYCYCGKDRNLRFPDLQCSVCLNMFHLSCLSPPCTSMMGF 80 STNYQFVCKHCTEDGFERFERGVSAWKAITATAMANLVVKRYVETNPDVPVDSFNAEKMRNFQANTYFFKKKEDLIPFIE 160 EHWQLLCPDREKVQTWQATLGSCLVANRDTYRAKDETMRNQNSEYALNNPNLFDFRSGYIFPFQRVGATVPKKRLVETET 240 PPPSSSKLKEDYKDSKREMKRSNTPWSNASIKKNEVPTVPIRYKPPPWRDSDFETVPKLPIFYPNSSSPNFFSLSEIPFN 320 RRGFRYSPCEAAKDLPNVMYREIELPPFTSRINWHDISTPVFIDHSALCATVEKGFRMARSNVFMTSGEWYFEIKIEKGG 400 GDDGAHVRIGVSRREAPLDAPVGYDAYSYGLRDLGGQKVHMSRPRNFMDSFGTGDIIGLHISLPKPSFAQHTTLPSCHDR 480 IPIRYKGQLYFEQPDYVPSKMMDELMIPSKHNRYIDLPYIPGSFIKVYKNGSYMGTAFENLLDFNPPNSINSNHYSFDDG 560 SLGYYPSISMYGGGIARFQFGPQFSHRPLVLGSNVRPVSERYNEQIAEDVLCDILDEIDYAEDPNTSSVTIDVPQEPNAG 640 ITIIPEIKDITE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC13G1.08c 14 DYGVSLK|GN 0.065 . SPBC13G1.08c 17 VSLKGNK|TG 0.052 . SPBC13G1.08c 24 TGSSPSK|AS 0.080 . SPBC13G1.08c 47 TYCYCGK|DR 0.069 . SPBC13G1.08c 49 CYCGKDR|NL 0.078 . SPBC13G1.08c 52 GKDRNLR|FP 0.206 . SPBC13G1.08c 89 NYQFVCK|HC 0.067 . SPBC13G1.08c 98 TEDGFER|FE 0.097 . SPBC13G1.08c 101 GFERFER|GV 0.491 . SPBC13G1.08c 107 RGVSAWK|AI 0.062 . SPBC13G1.08c 120 MANLVVK|RY 0.063 . SPBC13G1.08c 121 ANLVVKR|YV 0.433 . SPBC13G1.08c 138 DSFNAEK|MR 0.059 . SPBC13G1.08c 140 FNAEKMR|NF 0.105 . SPBC13G1.08c 150 ANTYFFK|KK 0.070 . SPBC13G1.08c 151 NTYFFKK|KE 0.092 . SPBC13G1.08c 152 TYFFKKK|ED 0.099 . SPBC13G1.08c 170 QLLCPDR|EK 0.076 . SPBC13G1.08c 172 LCPDREK|VQ 0.055 . SPBC13G1.08c 188 SCLVANR|DT 0.098 . SPBC13G1.08c 192 ANRDTYR|AK 0.111 . SPBC13G1.08c 194 RDTYRAK|DE 0.070 . SPBC13G1.08c 199 AKDETMR|NQ 0.072 . SPBC13G1.08c 216 PNLFDFR|SG 0.099 . SPBC13G1.08c 225 YIFPFQR|VG 0.072 . SPBC13G1.08c 232 VGATVPK|KR 0.062 . SPBC13G1.08c 233 GATVPKK|RL 0.090 . SPBC13G1.08c 234 ATVPKKR|LV 0.358 . SPBC13G1.08c 247 PPPSSSK|LK 0.070 . SPBC13G1.08c 249 PSSSKLK|ED 0.070 . SPBC13G1.08c 253 KLKEDYK|DS 0.071 . SPBC13G1.08c 256 EDYKDSK|RE 0.057 . SPBC13G1.08c 257 DYKDSKR|EM 0.123 . SPBC13G1.08c 260 DSKREMK|RS 0.104 . SPBC13G1.08c 261 SKREMKR|SN 0.342 . SPBC13G1.08c 272 WSNASIK|KN 0.071 . SPBC13G1.08c 273 SNASIKK|NE 0.104 . SPBC13G1.08c 282 VPTVPIR|YK 0.080 . SPBC13G1.08c 284 TVPIRYK|PP 0.060 . SPBC13G1.08c 289 YKPPPWR|DS 0.120 . SPBC13G1.08c 298 DFETVPK|LP 0.057 . SPBC13G1.08c 321 SEIPFNR|RG 0.079 . SPBC13G1.08c 322 EIPFNRR|GF 0.119 . SPBC13G1.08c 325 FNRRGFR|YS 0.253 . SPBC13G1.08c 333 SPCEAAK|DL 0.082 . SPBC13G1.08c 341 LPNVMYR|EI 0.126 . SPBC13G1.08c 351 LPPFTSR|IN 0.091 . SPBC13G1.08c 374 LCATVEK|GF 0.070 . SPBC13G1.08c 377 TVEKGFR|MA 0.103 . SPBC13G1.08c 380 KGFRMAR|SN 0.350 . SPBC13G1.08c 395 EWYFEIK|IE 0.067 . SPBC13G1.08c 398 FEIKIEK|GG 0.072 . SPBC13G1.08c 408 DDGAHVR|IG 0.073 . SPBC13G1.08c 413 VRIGVSR|RE 0.081 . SPBC13G1.08c 414 RIGVSRR|EA 0.147 . SPBC13G1.08c 432 AYSYGLR|DL 0.159 . SPBC13G1.08c 438 RDLGGQK|VH 0.052 . SPBC13G1.08c 443 QKVHMSR|PR 0.075 . SPBC13G1.08c 445 VHMSRPR|NF 0.130 . SPBC13G1.08c 465 LHISLPK|PS 0.069 . SPBC13G1.08c 480 LPSCHDR|IP 0.118 . SPBC13G1.08c 484 HDRIPIR|YK 0.138 . SPBC13G1.08c 486 RIPIRYK|GQ 0.061 . SPBC13G1.08c 500 PDYVPSK|MM 0.066 . SPBC13G1.08c 510 ELMIPSK|HN 0.064 . SPBC13G1.08c 513 IPSKHNR|YI 0.157 . SPBC13G1.08c 526 IPGSFIK|VY 0.068 . SPBC13G1.08c 529 SFIKVYK|NG 0.075 . SPBC13G1.08c 577 YGGGIAR|FQ 0.098 . SPBC13G1.08c 587 GPQFSHR|PL 0.101 . SPBC13G1.08c 596 VLGSNVR|PV 0.107 . SPBC13G1.08c 601 VRPVSER|YN 0.150 . SPBC13G1.08c 648 TIIPEIK|DI 0.077 . ____________________________^_________________

  • Fasta :-

    >SPBC13G1.08c ACTAAGTCCATTATTAACCCATATTGAGTAAATTAAATTCCTACCTCCCTGTGAGTGTAT TTTTTTCTGTACATAAGCAAGTGATCTGAGGAGGTTTGTATCTAATCTGAACTACACGTT TGTAGGTGAATACTAGTGACTGAGTCGTGTTCGATGAATATTCGCAAATGAACCTATGTA CTTGTGAAATCCTTTAGAGTTAATTAATTCTTCTTAAGTGGAACCTTAATTATTCGAGGA TTATTAGATAAACAAATTTCAACCCAAGAATTAATTTACATACCCCTTCTCGTGAATTTT GTCTGTATATAGCAGATGTGATTTTGTCCTTTTTATTTTTTTTAAACTGTACTACATAAA GCTTTGCAGTTATTTAAAGTTTTTTTTTAGAATTTGTTCATATTGCTAAGCTTGTGAAGA AGCTTTTGGACGCGTTTTTTATAAGCACAGTCTTGAGACAAGACACTTTTCGAAGATGCT GGCTCATGGATCCAATGATTATGGAGTTTCCTTAAAGGGGAATAAAACCGGTTCCTCTCC TAGTAAAGCATCTTCTCTAAATTGGAATGAACCTCATACCTTGAACGAACAGAACACCTA TTGCTATTGTGGAAAAGATAGAAATTTAAGATTCCCTGATCTTCAGTGTAGCGTTTGTTT AAATATGTTTCATCTCTCGTGTTTAAGTCCTCCTTGTACGTCGATGATGGGATTTAGTAC AAATTATCAATTTGTCTGTAAGCATTGCACTGAAGACGGATTTGAACGATTTGAACGAGG TGTATCCGCATGGAAGGCTATCACTGCTACTGCAATGGCCAATCTTGTTGTTAAACGGTA TGTTGAGACCAACCCAGACGTTCCTGTCGATAGTTTTAATGCCGAGAAAATGAGAAATTT TCAAGCAAATACATATTTTTTTAAGAAAAAAGAAGATTTAATTCCATTCATCGAAGAACA CTGGCAGCTATTGTGTCCCGATCGTGAAAAAGTACAAACTTGGCAAGCTACTTTGGGTAG TTGCCTTGTGGCTAACAGAGACACATACCGAGCTAAAGATGAAACGATGAGAAATCAAAA CTCTGAATATGCTTTAAACAACCCGAACCTTTTTGACTTTCGTTCAGGTTATATATTTCC ATTTCAACGAGTGGGAGCAACTGTACCAAAAAAACGTTTAGTTGAAACTGAAACTCCTCC TCCTTCATCTAGTAAGCTTAAGGAAGATTACAAGGATTCCAAAAGGGAGATGAAGAGATC TAATACTCCTTGGTCGAATGCGTCTATAAAAAAAAATGAAGTTCCCACCGTACCCATACG CTACAAACCGCCTCCTTGGAGAGATTCTGATTTTGAAACTGTTCCTAAATTACCAATATT TTATCCAAATTCCTCATCCCCTAATTTTTTCTCTCTCTCTGAAATTCCCTTTAATCGAAG AGGATTCCGCTATAGTCCTTGTGAAGCAGCCAAAGATTTACCAAATGTCATGTACAGAGA GATTGAACTTCCACCGTTTACGTCTCGGATTAATTGGCATGATATTTCTACACCTGTCTT TATTGATCACTCTGCTCTGTGTGCAACTGTGGAAAAGGGATTTCGGATGGCAAGGTCCAA TGTTTTTATGACCTCCGGTGAATGGTATTTTGAGATAAAAATAGAGAAAGGAGGAGGTGA TGATGGAGCACATGTCAGAATTGGAGTTTCTAGACGTGAAGCCCCTTTGGATGCTCCTGT TGGCTATGATGCTTATTCGTATGGACTTAGAGACTTGGGTGGTCAAAAAGTTCATATGTC ACGTCCACGAAACTTTATGGATTCTTTTGGTACAGGAGACATAATTGGATTACATATATC TCTTCCTAAACCGTCCTTTGCCCAACATACTACTCTTCCCTCGTGTCATGATAGAATCCC TATCAGATATAAAGGACAACTATATTTTGAGCAACCAGATTATGTACCAAGCAAAATGAT GGATGAGCTAATGATTCCATCTAAACACAATCGTTATATAGACTTACCTTACATTCCTGG ATCATTTATAAAAGTTTACAAAAATGGCTCATATATGGGTACAGCCTTTGAAAATTTGCT TGATTTTAATCCCCCTAATTCAATCAATTCAAATCATTATTCATTTGATGACGGTTCTCT TGGTTATTATCCTTCTATTAGTATGTATGGAGGTGGAATAGCTCGCTTCCAATTTGGTCC TCAATTTTCTCACCGTCCGCTTGTCTTAGGTTCAAATGTCAGGCCTGTTTCAGAAAGATA TAATGAGCAAATTGCGGAAGACGTCCTTTGCGACATCCTTGACGAAATAGATTATGCAGA AGACCCAAATACGTCTTCTGTGACTATTGATGTTCCTCAGGAACCAAATGCAGGCATAAC AATAATTCCGGAAATTAAGGATATAACCGAATAGAAATGTTTTATTTTATTCTTTTTCTA AAAGAATTATTCATACATATATTTTTGTAGTACG
  • Download Fasta

  • Fasta :-

    MLAHGSNDYGVSLKGNKTGSSPSKASSLNWNEPHTLNEQNTYCYCGKDRNLRFPDLQCSV CLNMFHLSCLSPPCTSMMGFSTNYQFVCKHCTEDGFERFERGVSAWKAITATAMANLVVK RYVETNPDVPVDSFNAEKMRNFQANTYFFKKKEDLIPFIEEHWQLLCPDREKVQTWQATL GSCLVANRDTYRAKDETMRNQNSEYALNNPNLFDFRSGYIFPFQRVGATVPKKRLVETET PPPSSSKLKEDYKDSKREMKRSNTPWSNASIKKNEVPTVPIRYKPPPWRDSDFETVPKLP IFYPNSSSPNFFSLSEIPFNRRGFRYSPCEAAKDLPNVMYREIELPPFTSRINWHDISTP VFIDHSALCATVEKGFRMARSNVFMTSGEWYFEIKIEKGGGDDGAHVRIGVSRREAPLDA PVGYDAYSYGLRDLGGQKVHMSRPRNFMDSFGTGDIIGLHISLPKPSFAQHTTLPSCHDR IPIRYKGQLYFEQPDYVPSKMMDELMIPSKHNRYIDLPYIPGSFIKVYKNGSYMGTAFEN LLDFNPPNSINSNHYSFDDGSLGYYPSISMYGGGIARFQFGPQFSHRPLVLGSNVRPVSE RYNEQIAEDVLCDILDEIDYAEDPNTSSVTIDVPQEPNAGITIIPEIKDITE

  • title: Zn binding site
  • coordinates: C43,C45,C58,C61,H66,C69,C88,C91
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC13G1.08c599 SVRPVSERYN0.993unspSPBC13G1.08c599 SVRPVSERYN0.993unspSPBC13G1.08c599 SVRPVSERYN0.993unspSPBC13G1.08c291 SPWRDSDFET0.995unspSPBC13G1.08c327 SGFRYSPCEA0.997unsp

SPBC13G1.08c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India