SPBC15C4.02 | ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipd homeostasis

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  • Fasta :-

    >SPBC15C4.02 MFSRFSWPRITRCFRSYPKKKSSCISFTHHAREHTNFKKPAVVGASITLMASVALVDFDP VKHAGVSSKRAYRVVLAGFLCFSDYKKVLGSSYASEEERQLALSECHLRCAERSLKVFEE NGGIYIKIGQHLSAMGYVIPKEWTNTMVKLQDRCPSTSLKDIDHLFRVDTGKGLDETFDE FDPIALGVASLAQVHKARLKDSDVWVAVKVQHPSVSLNSPLDLSMTRWVFKAIKTFFPDF KLMWLADEIERSLPQELDFTREAKNSIETKEHFAHLSTSLYVPEVMWSKPRILVMEYVAG ARIDNLSFMDEHSISRDLVSVDICHIFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSKSPR NYEIVLLDHGLYRDIPHELQVDYANMWLNIINFNEKNLKFYAKKVANVSDENFPIFATAI TGRPYKSLKSLPIGGPNHEEEQKKFISALQKGGMLQSIIRLLSTMPRLTLLLMKTNDLVR SLDENLKTKSGPEKLYLIMARYCLRCVYDDKMDSLWNSRSFWVSKVFKGTYYRLSYLFSS LKYTLAENYFYYKHMYL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/323 Sequence name : 323 Sequence length : 557 VALUES OF COMPUTED PARAMETERS Coef20 : 4.802 CoefTot : -0.295 ChDiff : 15 ZoneTo : 56 KR : 10 DE : 1 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.888 1.982 0.335 0.665 MesoH : -0.684 0.338 -0.382 0.190 MuHd_075 : 32.053 15.768 10.189 5.338 MuHd_095 : 46.958 23.928 12.265 10.564 MuHd_100 : 44.115 22.342 11.497 9.663 MuHd_105 : 36.674 19.625 9.185 9.577 Hmax_075 : 7.000 1.400 1.351 1.762 Hmax_095 : 10.900 7.700 2.129 4.051 Hmax_100 : 13.000 11.600 3.007 3.340 Hmax_105 : 3.200 6.200 1.899 2.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0780 0.9220 DFMC : 0.0488 0.9512 This protein is probably imported in mitochondria. f(Ser) = 0.1429 f(Arg) = 0.0893 CMi = 0.73260 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 557 SPBC15C4.02 MFSRFSWPRITRCFRSYPKKKSSCISFTHHAREHTNFKKPAVVGASITLMASVALVDFDPVKHAGVSSKRAYRVVLAGFL 80 CFSDYKKVLGSSYASEEERQLALSECHLRCAERSLKVFEENGGIYIKIGQHLSAMGYVIPKEWTNTMVKLQDRCPSTSLK 160 DIDHLFRVDTGKGLDETFDEFDPIALGVASLAQVHKARLKDSDVWVAVKVQHPSVSLNSPLDLSMTRWVFKAIKTFFPDF 240 KLMWLADEIERSLPQELDFTREAKNSIETKEHFAHLSTSLYVPEVMWSKPRILVMEYVAGARIDNLSFMDEHSISRDLVS 320 VDICHIFNEMIFGKGGHLHCDPHGGNVLIRSKPKNSKSPRNYEIVLLDHGLYRDIPHELQVDYANMWLNIINFNEKNLKF 400 YAKKVANVSDENFPIFATAITGRPYKSLKSLPIGGPNHEEEQKKFISALQKGGMLQSIIRLLSTMPRLTLLLMKTNDLVR 480 SLDENLKTKSGPEKLYLIMARYCLRCVYDDKMDSLWNSRSFWVSKVFKGTYYRLSYLFSSLKYTLAENYFYYKHMYL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC15C4.02 4 ---MFSR|FS 0.101 . SPBC15C4.02 9 SRFSWPR|IT 0.106 . SPBC15C4.02 12 SWPRITR|CF 0.191 . SPBC15C4.02 15 RITRCFR|SY 0.362 . SPBC15C4.02 19 CFRSYPK|KK 0.061 . SPBC15C4.02 20 FRSYPKK|KS 0.180 . SPBC15C4.02 21 RSYPKKK|SS 0.309 . SPBC15C4.02 32 SFTHHAR|EH 0.080 . SPBC15C4.02 38 REHTNFK|KP 0.066 . SPBC15C4.02 39 EHTNFKK|PA 0.106 . SPBC15C4.02 62 VDFDPVK|HA 0.075 . SPBC15C4.02 69 HAGVSSK|RA 0.081 . SPBC15C4.02 70 AGVSSKR|AY 0.205 . SPBC15C4.02 73 SSKRAYR|VV 0.491 . SPBC15C4.02 86 LCFSDYK|KV 0.062 . SPBC15C4.02 87 CFSDYKK|VL 0.122 . SPBC15C4.02 99 YASEEER|QL 0.109 . SPBC15C4.02 109 LSECHLR|CA 0.133 . SPBC15C4.02 113 HLRCAER|SL 0.147 . SPBC15C4.02 116 CAERSLK|VF 0.112 . SPBC15C4.02 127 NGGIYIK|IG 0.057 . SPBC15C4.02 141 MGYVIPK|EW 0.063 . SPBC15C4.02 149 WTNTMVK|LQ 0.062 . SPBC15C4.02 153 MVKLQDR|CP 0.104 . SPBC15C4.02 160 CPSTSLK|DI 0.110 . SPBC15C4.02 167 DIDHLFR|VD 0.076 . SPBC15C4.02 172 FRVDTGK|GL 0.086 . SPBC15C4.02 196 SLAQVHK|AR 0.062 . SPBC15C4.02 198 AQVHKAR|LK 0.100 . SPBC15C4.02 200 VHKARLK|DS 0.069 . SPBC15C4.02 209 DVWVAVK|VQ 0.058 . SPBC15C4.02 227 LDLSMTR|WV 0.142 . SPBC15C4.02 231 MTRWVFK|AI 0.090 . SPBC15C4.02 234 WVFKAIK|TF 0.062 . SPBC15C4.02 241 TFFPDFK|LM 0.062 . SPBC15C4.02 251 LADEIER|SL 0.113 . SPBC15C4.02 261 QELDFTR|EA 0.101 . SPBC15C4.02 264 DFTREAK|NS 0.111 . SPBC15C4.02 270 KNSIETK|EH 0.090 . SPBC15C4.02 289 PEVMWSK|PR 0.057 . SPBC15C4.02 291 VMWSKPR|IL 0.086 . SPBC15C4.02 302 EYVAGAR|ID 0.073 . SPBC15C4.02 316 DEHSISR|DL 0.090 . SPBC15C4.02 334 NEMIFGK|GG 0.065 . SPBC15C4.02 350 GGNVLIR|SK 0.154 . SPBC15C4.02 352 NVLIRSK|PK 0.054 . SPBC15C4.02 354 LIRSKPK|NS 0.067 . SPBC15C4.02 357 SKPKNSK|SP 0.081 . SPBC15C4.02 360 KNSKSPR|NY 0.216 . SPBC15C4.02 373 LDHGLYR|DI 0.131 . SPBC15C4.02 396 IINFNEK|NL 0.059 . SPBC15C4.02 399 FNEKNLK|FY 0.068 . SPBC15C4.02 403 NLKFYAK|KV 0.082 . SPBC15C4.02 404 LKFYAKK|VA 0.112 . SPBC15C4.02 423 ATAITGR|PY 0.082 . SPBC15C4.02 426 ITGRPYK|SL 0.196 . SPBC15C4.02 429 RPYKSLK|SL 0.116 . SPBC15C4.02 443 NHEEEQK|KF 0.062 . SPBC15C4.02 444 HEEEQKK|FI 0.210 . SPBC15C4.02 451 FISALQK|GG 0.061 . SPBC15C4.02 460 MLQSIIR|LL 0.091 . SPBC15C4.02 467 LLSTMPR|LT 0.087 . SPBC15C4.02 474 LTLLLMK|TN 0.059 . SPBC15C4.02 480 KTNDLVR|SL 0.184 . SPBC15C4.02 487 SLDENLK|TK 0.059 . SPBC15C4.02 489 DENLKTK|SG 0.080 . SPBC15C4.02 494 TKSGPEK|LY 0.070 . SPBC15C4.02 501 LYLIMAR|YC 0.083 . SPBC15C4.02 505 MARYCLR|CV 0.115 . SPBC15C4.02 511 RCVYDDK|MD 0.060 . SPBC15C4.02 519 DSLWNSR|SF 0.095 . SPBC15C4.02 525 RSFWVSK|VF 0.060 . SPBC15C4.02 528 WVSKVFK|GT 0.082 . SPBC15C4.02 533 FKGTYYR|LS 0.065 . SPBC15C4.02 542 YLFSSLK|YT 0.061 . SPBC15C4.02 553 ENYFYYK|HM 0.062 . ____________________________^_________________

  • Fasta :-

    >SPBC15C4.02 GAAAACTATCTACACATAACTTAGAAATTTAATATAGCTCACACACTCTGGCTCATTGTA GAACTACGAGCTAGAATTTTTAAGAAATGTATGCTACCTAATTTTAATTCCGATCTGTAC TTTTAGTTAGGTATCGAGTTTATAGAAGATTGCATATTGAAGCAAAAGAAGGAGCAGTCG TACAGAAACAATGTTGTTATAAACCGATTATATGAACTCCTATGTTTTAACAAGCCAAGT TTTAGTATATAATTATTCAAAAAGAAAGAATTATTGGCATTTTTGGCTTCGCTCCTTCAT GTCAAATAATCGCAAGTTTCTGGTCCATATCCATCTTATACCTCACCTCAATTCTCTCTA CAGTATATGTTTTCTCGGTTTTCCTGGCCAAGAATTACTCGTTGCTTCCGATCATATCCA AAAAAGAAATCATCATGTATTTCTTTTACTCACCATGCTCGGGAGCATACTAATTTTAAG AAACCTGCTGTTGTTGGCGCTTCAATTACTTTAATGGCATCTGTTGCGCTAGTAGACTTT GATCCTGTAAAGCATGCAGGTGTATCATCTAAAAGAGCATATCGTGTTGTTTTGGCTGGA TTTCTTTGCTTTTCTGATTACAAAAAAGTACTTGGTTCTTCGTATGCTTCAGAAGAGGAG CGTCAGCTAGCATTGAGTGAATGCCATTTGCGATGTGCAGAAAGATCTTTAAAGGTCTTT GAAGAGAATGGAGGTATATATATTAAAATTGGGCAGCATTTGTCTGCTATGGGTTATGTA ATTCCAAAGGAATGGACCAATACAATGGTGAAATTACAAGATCGTTGTCCGTCAACTAGT CTGAAGGATATAGATCACCTTTTCAGAGTCGACACTGGTAAAGGTCTTGACGAGACGTTC GATGAATTTGATCCTATTGCACTTGGTGTAGCTAGTTTAGCACAAGTTCACAAAGCAAGA CTTAAAGATTCAGATGTTTGGGTTGCCGTCAAAGTGCAACATCCCTCTGTCAGTTTAAAT TCACCTTTAGATCTTTCCATGACAAGATGGGTGTTTAAAGCAATTAAAACCTTTTTCCCA GATTTCAAATTGATGTGGTTAGCCGACGAAATAGAACGTTCTCTGCCTCAAGAATTAGAC TTCACCCGTGAAGCAAAGAATAGTATCGAGACAAAAGAGCATTTTGCTCACTTATCTACT TCACTATATGTTCCTGAAGTCATGTGGTCGAAGCCTAGAATATTGGTCATGGAGTACGTT GCGGGTGCCCGAATCGATAATTTATCGTTTATGGATGAGCATAGTATTTCTAGAGATCTT GTCTCTGTTGACATTTGTCACATTTTTAATGAAATGATTTTTGGAAAAGGCGGTCATTTG CATTGTGATCCACATGGTGGGAACGTCTTAATTCGTTCAAAGCCTAAGAACTCAAAATCA CCAAGGAATTATGAAATTGTTCTTCTTGATCATGGTTTATATCGTGATATTCCTCATGAA CTTCAAGTGGATTATGCAAATATGTGGCTCAACATTATTAATTTCAACGAAAAGAACTTA AAATTTTATGCTAAAAAAGTAGCCAATGTTTCCGACGAGAATTTTCCTATCTTTGCGACT GCTATTACAGGGAGGCCTTATAAAAGCTTGAAAAGTTTACCAATTGGCGGCCCTAATCAC GAAGAAGAGCAGAAAAAATTTATATCTGCTTTGCAAAAAGGTGGAATGCTTCAAAGTATA ATTCGCCTTTTGAGCACTATGCCTCGATTAACATTACTCTTAATGAAAACGAACGATTTG GTAAGATCACTTGATGAAAATTTGAAAACTAAAAGCGGTCCAGAAAAATTGTATTTAATT ATGGCTCGTTACTGCTTAAGATGCGTGTACGATGACAAGATGGACTCACTATGGAATTCA CGCTCATTTTGGGTTTCTAAAGTATTTAAGGGAACGTATTATAGGCTCAGCTATTTATTC AGCTCTTTAAAGTACACCCTTGCTGAAAACTACTTTTATTATAAACACATGTATCTATGA TTTTTGTTTTTCATCACAACAAACCTTTCATCTCACTCTTTACCGCACATAGTTAATATT TAAAACAGCTAGTATTTTACTTTCCTTTATTGATATATATATTTCCTCTCATGTTTTTTT TTTCCTTCTCAAAGACTTAATATCTACACCTATTTTATAATGTATCTACTACCATGTAAC TGCCCATTCT
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  • Fasta :-

  • title: putative ATP binding site
  • coordinates: L199,K200,D201,S202,D203,V206,S216,N218,S277,M295,E296,Y297,V298,D341,G345,N346,L348,L367,D368
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC15C4.02158 SCPSTSLKDI0.998unspSPBC15C4.02158 SCPSTSLKDI0.998unspSPBC15C4.02158 SCPSTSLKDI0.998unspSPBC15C4.02219 SVSLNSPLDL0.993unspSPBC15C4.02358 SKNSKSPRNY0.996unspSPBC15C4.0267 SHAGVSSKRA0.991unspSPBC15C4.0295 SSSYASEEER0.995unsp

SPBC15C4.02      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India