SPBC16D10.08c | heat shock protein Hsp104

_IDPredictionOTHERSPmTPCS_Position
SPBC16D10.08cOTHER0.9999720.0000180.000011
No Results

  • Fasta :-

    >SPBC16D10.08c MADYPFTDKAAKTLSDAYSIAQSYGHSQLTPIHIAAALLSDSDSNGTTLLRTIVDKAGGD GQKFERSVTSRLVRLPAQDPPPEQVTLSPESAKLLRNAHELQKTQKDSYIAQDHFIAVFT KDDTLKSLLAEAGVTPKAFEFAVNNVRGNKRIDSKNAEEGFDALNKFTVDLTELARNGQL DPVIGREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKL LSLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAA NLLKPMLARGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEK YEVHHGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLE RKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAK RRLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQPGSE PLLIDVVGPDQINEIVARWTGIPVTRLKTTEKERLLNMEKVLSKQVIGQNEAVTAVANAI RLSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVS RLIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQG QVVDAKNAVIIMTSNLGAEYLTTDNESDDGKIDSTTREMVMNSIRGFFRPEFLNRISSIV IFNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNR VIQNQVLNPMAVLILNGQLRDKETAHVVVQNGKIFVKPNHEANANGSADIDMDGIDDDVN DEELE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/109 Sequence name : 109 Sequence length : 905 VALUES OF COMPUTED PARAMETERS Coef20 : 3.720 CoefTot : 0.141 ChDiff : -17 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.182 1.224 0.141 0.560 MesoH : -0.582 0.248 -0.382 0.178 MuHd_075 : 28.353 14.651 6.711 4.291 MuHd_095 : 29.099 18.347 8.150 5.863 MuHd_100 : 23.218 14.837 7.300 4.865 MuHd_105 : 24.904 13.568 7.404 4.842 Hmax_075 : 13.883 9.217 1.030 4.083 Hmax_095 : 3.587 5.687 -0.806 3.036 Hmax_100 : 3.300 7.800 -0.535 3.210 Hmax_105 : 9.200 6.000 0.569 3.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5678 0.4322 DFMC : 0.6926 0.3074
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 905 SPBC16D10.08c MADYPFTDKAAKTLSDAYSIAQSYGHSQLTPIHIAAALLSDSDSNGTTLLRTIVDKAGGDGQKFERSVTSRLVRLPAQDP 80 PPEQVTLSPESAKLLRNAHELQKTQKDSYIAQDHFIAVFTKDDTLKSLLAEAGVTPKAFEFAVNNVRGNKRIDSKNAEEG 160 FDALNKFTVDLTELARNGQLDPVIGREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKL 240 LSLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAANLLKPMLARGKLHCIGATTL 320 AEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEKYEVHHGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDE 400 AAAAVRVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAK 480 RRLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQPGSEPLLIDVVGPDQINEIVARWT 560 GIPVTRLKTTEKERLLNMEKVLSKQVIGQNEAVTAVANAIRLSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFD 640 DENAMIRIDMSEYMEKHSVSRLIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQG 720 QVVDAKNAVIIMTSNLGAEYLTTDNESDDGKIDSTTREMVMNSIRGFFRPEFLNRISSIVIFNRLRRVDIRNIVENRILE 800 VQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNRVIQNQVLNPMAVLILNGQLRDKETAHVVVQNGKIFVKPNH 880 EANANGSADIDMDGIDDDVNDEELE 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC16D10.08c 9 DYPFTDK|AA 0.058 . SPBC16D10.08c 12 FTDKAAK|TL 0.070 . SPBC16D10.08c 51 NGTTLLR|TI 0.072 . SPBC16D10.08c 56 LRTIVDK|AG 0.092 . SPBC16D10.08c 63 AGGDGQK|FE 0.060 . SPBC16D10.08c 66 DGQKFER|SV 0.188 . SPBC16D10.08c 71 ERSVTSR|LV 0.126 . SPBC16D10.08c 74 VTSRLVR|LP 0.185 . SPBC16D10.08c 93 LSPESAK|LL 0.068 . SPBC16D10.08c 96 ESAKLLR|NA 0.141 . SPBC16D10.08c 103 NAHELQK|TQ 0.059 . SPBC16D10.08c 106 ELQKTQK|DS 0.095 . SPBC16D10.08c 121 FIAVFTK|DD 0.068 . SPBC16D10.08c 126 TKDDTLK|SL 0.082 . SPBC16D10.08c 137 EAGVTPK|AF 0.071 . SPBC16D10.08c 147 FAVNNVR|GN 0.073 . SPBC16D10.08c 150 NNVRGNK|RI 0.117 . SPBC16D10.08c 151 NVRGNKR|ID 0.176 . SPBC16D10.08c 155 NKRIDSK|NA 0.094 . SPBC16D10.08c 166 GFDALNK|FT 0.062 . SPBC16D10.08c 176 DLTELAR|NG 0.064 . SPBC16D10.08c 186 LDPVIGR|ED 0.080 . SPBC16D10.08c 191 GREDEIR|RT 0.105 . SPBC16D10.08c 192 REDEIRR|TI 0.097 . SPBC16D10.08c 195 EIRRTIR|VL 0.227 . SPBC16D10.08c 199 TIRVLSR|RT 0.084 . SPBC16D10.08c 200 IRVLSRR|TK 0.116 . SPBC16D10.08c 202 VLSRRTK|NN 0.125 . SPBC16D10.08c 215 GEPGVGK|TS 0.063 . SPBC16D10.08c 224 IAEGLAR|RI 0.086 . SPBC16D10.08c 225 AEGLARR|II 0.143 . SPBC16D10.08c 239 ANLSNCK|LL 0.060 . SPBC16D10.08c 253 SLVAGSK|FR 0.071 . SPBC16D10.08c 255 VAGSKFR|GE 0.099 . SPBC16D10.08c 261 RGEFEER|IK 0.082 . SPBC16D10.08c 263 EFEERIK|SV 0.086 . SPBC16D10.08c 267 RIKSVLK|EV 0.093 . SPBC16D10.08c 304 DAANLLK|PM 0.058 . SPBC16D10.08c 309 LKPMLAR|GK 0.101 . SPBC16D10.08c 311 PMLARGK|LH 0.061 . SPBC16D10.08c 324 TTLAEYK|KY 0.060 . SPBC16D10.08c 325 TLAEYKK|YI 0.154 . SPBC16D10.08c 329 YKKYIEK|DA 0.074 . SPBC16D10.08c 335 KDAAFER|RF 0.091 . SPBC16D10.08c 336 DAAFERR|FQ 0.173 . SPBC16D10.08c 343 FQIILVK|EP 0.061 . SPBC16D10.08c 355 DTISILR|GL 0.073 . SPBC16D10.08c 358 SILRGLK|EK 0.098 . SPBC16D10.08c 360 LRGLKEK|YE 0.075 . SPBC16D10.08c 372 GVTISDR|AL 0.093 . SPBC16D10.08c 383 AAHLASR|YL 0.083 . SPBC16D10.08c 388 SRYLTSR|RL 0.088 . SPBC16D10.08c 389 RYLTSRR|LP 0.111 . SPBC16D10.08c 406 EAAAAVR|VT 0.097 . SPBC16D10.08c 409 AAVRVTR|ES 0.237 . SPBC16D10.08c 421 VLDNLER|KL 0.079 . SPBC16D10.08c 422 LDNLERK|LR 0.068 . SPBC16D10.08c 424 NLERKLR|QL 0.266 . SPBC16D10.08c 427 RKLRQLR|VE 0.172 . SPBC16D10.08c 431 QLRVEIR|AL 0.110 . SPBC16D10.08c 435 EIRALER|EK 0.077 . SPBC16D10.08c 437 RALEREK|DE 0.065 . SPBC16D10.08c 442 EKDEASK|ER 0.056 . SPBC16D10.08c 444 DEASKER|LK 0.089 . SPBC16D10.08c 446 ASKERLK|AA 0.072 . SPBC16D10.08c 449 ERLKAAR|KE 0.098 . SPBC16D10.08c 450 RLKAARK|EA 0.133 . SPBC16D10.08c 460 QVEEETR|PI 0.085 . SPBC16D10.08c 463 EETRPIR|EK 0.187 . SPBC16D10.08c 465 TRPIREK|YE 0.070 . SPBC16D10.08c 470 EKYELEK|SR 0.088 . SPBC16D10.08c 472 YELEKSR|GS 0.091 . SPBC16D10.08c 480 SELQDAK|RR 0.059 . SPBC16D10.08c 481 ELQDAKR|RL 0.131 . SPBC16D10.08c 482 LQDAKRR|LD 0.116 . SPBC16D10.08c 487 RRLDELK|AK 0.061 . SPBC16D10.08c 489 LDELKAK|AE 0.075 . SPBC16D10.08c 495 KAEDAER|RN 0.072 . SPBC16D10.08c 496 AEDAERR|ND 0.112 . SPBC16D10.08c 506 TLAADLK|YY 0.074 . SPBC16D10.08c 515 GIPDLQK|RI 0.066 . SPBC16D10.08c 516 IPDLQKR|IE 0.130 . SPBC16D10.08c 524 EYLEQQK|RK 0.057 . SPBC16D10.08c 525 YLEQQKR|KA 0.217 . SPBC16D10.08c 526 LEQQKRK|AD 0.109 . SPBC16D10.08c 558 INEIVAR|WT 0.129 . SPBC16D10.08c 566 TGIPVTR|LK 0.089 . SPBC16D10.08c 568 IPVTRLK|TT 0.069 . SPBC16D10.08c 572 RLKTTEK|ER 0.055 . SPBC16D10.08c 574 KTTEKER|LL 0.077 . SPBC16D10.08c 580 RLLNMEK|VL 0.064 . SPBC16D10.08c 584 MEKVLSK|QV 0.083 . SPBC16D10.08c 601 AVANAIR|LS 0.099 . SPBC16D10.08c 604 NAIRLSR|AG 0.153 . SPBC16D10.08c 627 GPSGTGK|TL 0.073 . SPBC16D10.08c 632 GKTLLTK|AL 0.060 . SPBC16D10.08c 647 DENAMIR|ID 0.083 . SPBC16D10.08c 656 MSEYMEK|HS 0.062 . SPBC16D10.08c 661 EKHSVSR|LI 0.121 . SPBC16D10.08c 683 QLTEQLR|RR 0.066 . SPBC16D10.08c 684 LTEQLRR|RP 0.087 . SPBC16D10.08c 685 TEQLRRR|PY 0.217 . SPBC16D10.08c 697 LFDEIEK|AA 0.062 . SPBC16D10.08c 714 QVLDDGR|IT 0.088 . SPBC16D10.08c 726 GQVVDAK|NA 0.074 . SPBC16D10.08c 751 NESDDGK|ID 0.080 . SPBC16D10.08c 757 KIDSTTR|EM 0.063 . SPBC16D10.08c 765 MVMNSIR|GF 0.097 . SPBC16D10.08c 769 SIRGFFR|PE 0.089 . SPBC16D10.08c 775 RPEFLNR|IS 0.123 . SPBC16D10.08c 784 SIVIFNR|LR 0.080 . SPBC16D10.08c 786 VIFNRLR|RV 0.085 . SPBC16D10.08c 787 IFNRLRR|VD 0.342 . SPBC16D10.08c 791 LRRVDIR|NI 0.108 . SPBC16D10.08c 797 RNIVENR|IL 0.107 . SPBC16D10.08c 803 RILEVQK|RL 0.062 . SPBC16D10.08c 804 ILEVQKR|LQ 0.183 . SPBC16D10.08c 810 RLQSNHR|SI 0.157 . SPBC16D10.08c 813 SNHRSIK|IE 0.126 . SPBC16D10.08c 821 EVSDEAK|DL 0.079 . SPBC16D10.08c 836 SPAYGAR|PL 0.133 . SPBC16D10.08c 840 GARPLNR|VI 0.105 . SPBC16D10.08c 860 ILNGQLR|DK 0.146 . SPBC16D10.08c 862 NGQLRDK|ET 0.066 . SPBC16D10.08c 873 VVVQNGK|IF 0.056 . SPBC16D10.08c 877 NGKIFVK|PN 0.069 . ____________________________^_________________

  • Fasta :-

    >SPBC16D10.08c GTAACATCATCGTGTATATATATGCACAGCTTCTCTACCTGCGGCATCCTCAACCATCAA TCTATAACCGAAGAATTTATTATAATAACGATATTAAGTTCTTATTAAATCGAACTGAAA ACCGTATATATTTACCGTTCAACGACTCTCTCTTTTTTGTTTTATAACGAGCGACAAATA TACAATTCCTTTTTTTTGGATTTATCTATAAATTATAAAAATTCCTATAATAATATAACT CGATATGGCTGATTATCCTTTTACTGACAAAGCCGCAAAGACATTGTCTGATGCGTACTC AATTGCACAATCTTATGGTCATTCACAATTAACCCCTATTCACATTGCTGCTGCTCTTTT GTCCGACAGTGACAGTAACGGTACTACCTTACTGCGCACCATCGTCGACAAAGCTGGTGG TGATGGTCAAAAGTTTGAGCGAAGTGTTACTAGTCGGTTAGTTCGCTTGCCTGCTCAGGA TCCACCTCCAGAACAAGTGACTCTGTCACCTGAAAGTGCGAAACTGCTGCGAAATGCTCA TGAACTTCAAAAAACACAAAAAGATTCTTACATTGCTCAAGATCATTTTATCGCTGTGTT CACTAAAGACGACACGCTAAAGAGTTTATTGGCAGAAGCCGGTGTCACCCCGAAAGCGTT TGAATTTGCTGTAAATAACGTCCGTGGTAATAAAAGAATCGATTCAAAGAATGCCGAGGA AGGATTTGATGCACTAAATAAATTTACTGTTGATCTTACAGAGCTCGCTAGAAATGGTCA ACTGGATCCAGTTATCGGACGTGAAGATGAAATTCGTCGTACAATTCGCGTACTTTCTAG AAGAACGAAAAATAATCCAGTTCTTATTGGTGAGCCTGGTGTAGGTAAGACCTCCATTGC TGAAGGACTTGCTCGTCGTATAATTGACGATGATGTCCCCGCTAATCTTTCGAATTGTAA GCTTCTCAGCCTGGACGTCGGAAGCTTAGTTGCCGGCTCCAAATTTCGTGGTGAATTTGA AGAGCGTATCAAATCTGTTTTAAAAGAAGTTGAAGAAAGTGAAACTCCCATTATTTTATT CGTAGATGAAATGCATCTTTTAATGGGCGCAGGTTCCGGTGGTGAAGGTGGCATGGACGC TGCCAATTTGCTGAAGCCAATGCTTGCACGTGGTAAGCTTCACTGTATTGGTGCTACTAC TTTGGCTGAATACAAGAAATACATCGAAAAAGATGCTGCTTTCGAACGTAGATTCCAAAT CATCTTGGTAAAAGAGCCTTCTATTGAAGATACGATTTCTATCCTTCGTGGTCTTAAAGA AAAGTATGAGGTTCATCATGGTGTTACTATCTCTGACCGTGCCTTGGTTACTGCTGCCCA TCTCGCTTCCCGGTACCTAACTTCTCGTCGTCTTCCAGATTCTGCCATCGACTTGGTCGA TGAAGCTGCGGCTGCAGTTCGTGTTACTCGTGAATCTCAGCCCGAAGTTCTTGATAACCT TGAGAGAAAGCTTCGACAACTCCGCGTTGAAATTCGTGCTTTAGAGCGTGAGAAGGACGA AGCTTCCAAAGAACGTCTCAAGGCTGCTCGTAAAGAGGCTGAACAAGTGGAAGAAGAAAC AAGACCTATTCGTGAGAAGTATGAATTAGAAAAGTCTCGTGGAAGTGAACTTCAAGATGC TAAGCGTCGTCTTGATGAGTTGAAGGCTAAGGCTGAGGATGCCGAGCGTCGTAATGATTT CACTCTTGCTGCTGATTTGAAATACTATGGTATTCCTGATTTGCAAAAACGTATTGAATA TTTAGAGCAACAAAAAAGAAAGGCTGATGCAGAAGCGATTGCAAACGCTCAACCAGGCTC AGAACCTTTACTTATTGACGTAGTTGGGCCCGATCAAATCAACGAAATCGTTGCAAGGTG GACTGGTATTCCGGTTACTCGTTTGAAGACAACTGAAAAGGAACGACTCCTTAACATGGA GAAGGTTCTCAGTAAACAAGTAATTGGTCAAAATGAAGCAGTTACTGCAGTTGCAAACGC CATTCGCTTATCTCGTGCTGGTCTTTCTGATCCTAATCAACCAATCGCATCTTTCTTGTT TTGCGGTCCTTCCGGTACTGGTAAGACTTTATTGACAAAGGCATTGGCATCATTTATGTT TGATGATGAAAATGCAATGATTCGTATTGACATGTCTGAATACATGGAAAAACACTCTGT TTCACGTCTCATTGGAGCACCACCCGGTTATGTTGGACATGAAGCTGGTGGACAGCTTAC TGAACAACTTCGTCGACGACCTTACTCCGTCATCTTGTTTGACGAGATTGAAAAGGCTGC TCCAGAAGTATTGACTGTACTTTTGCAGGTACTAGATGATGGACGTATCACTAGTGGCCA AGGCCAGGTTGTTGATGCCAAGAATGCTGTTATCATTATGACTTCTAACTTGGGCGCTGA ATACTTGACAACAGACAATGAGTCTGATGATGGAAAGATAGATAGTACCACTCGGGAAAT GGTTATGAACTCGATTCGTGGCTTCTTCCGTCCCGAATTTTTGAATCGTATCTCTTCAAT CGTTATCTTTAATCGTCTGCGTCGTGTGGATATCCGCAATATTGTCGAAAATCGTATATT AGAGGTTCAGAAACGGCTTCAATCCAATCATCGCTCAATTAAAATCGAGGTTAGCGACGA AGCTAAAGACCTTCTTGGAAGCGCTGGTTATTCCCCTGCTTATGGTGCAAGACCTTTGAA CCGTGTCATTCAAAATCAAGTTTTGAATCCCATGGCTGTCTTAATTTTGAATGGCCAGCT TCGCGATAAGGAGACTGCTCATGTCGTAGTCCAAAATGGCAAGATATTTGTCAAACCAAA TCATGAAGCTAATGCAAACGGCTCTGCTGATATTGACATGGATGGTATTGACGACGATGT TAATGATGAAGAATTGGAATAAATGTATTTCAAATGAGAAAGTTCTAACGATACTTTATG ATATAGTTTAATGATATGCTTAATCTTAATATATTTTATTTATTTATAAAAATATA
  • Download Fasta

  • Fasta :-

    MADYPFTDKAAKTLSDAYSIAQSYGHSQLTPIHIAAALLSDSDSNGTTLLRTIVDKAGGD GQKFERSVTSRLVRLPAQDPPPEQVTLSPESAKLLRNAHELQKTQKDSYIAQDHFIAVFT KDDTLKSLLAEAGVTPKAFEFAVNNVRGNKRIDSKNAEEGFDALNKFTVDLTELARNGQL DPVIGREDEIRRTIRVLSRRTKNNPVLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKL LSLDVGSLVAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAA NLLKPMLARGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEK YEVHHGVTISDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLE RKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAK RRLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQPGSE PLLIDVVGPDQINEIVARWTGIPVTRLKTTEKERLLNMEKVLSKQVIGQNEAVTAVANAI RLSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKHSVS RLIGAPPGYVGHEAGGQLTEQLRRRPYSVILFDEIEKAAPEVLTVLLQVLDDGRITSGQG QVVDAKNAVIIMTSNLGAEYLTTDNESDDGKIDSTTREMVMNSIRGFFRPEFLNRISSIV IFNRLRRVDIRNIVENRILEVQKRLQSNHRSIKIEVSDEAKDLLGSAGYSPAYGARPLNR VIQNQVLNPMAVLILNGQLRDKETAHVVVQNGKIFVKPNHEANANGSADIDMDGIDDDVN DEELE

  • title: ATP binding site
  • coordinates: E210,P211,G212,V213,G214,K215,T216,S217,D281,T319
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC16D10.08c346 SVKEPSIEDT0.996unspSPBC16D10.08c346 SVKEPSIEDT0.996unspSPBC16D10.08c346 SVKEPSIEDT0.996unspSPBC16D10.08c393 SRLPDSAIDL0.996unspSPBC16D10.08c411 SVTRESQPEV0.994unspSPBC16D10.08c441 SKDEASKERL0.994unspSPBC16D10.08c88 SQVTLSPESA0.996unspSPBC16D10.08c91 SLSPESAKLL0.991unsp

SPBC16D10.08c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India