SPBC16G5.09 | serine carboxypeptidase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC16G5.09SP0.0145670.9847560.000678CS pos: 21-22. TLA-DS. Pr: 0.7744
No Results

  • Fasta :-

    >SPBC16G5.09 MISKLLKIVLLTAGVIGNTLADSRIHEQYLVKAFPNEPVDYEGRMHAGHLNQTDQLDGDL FFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNNTFQLNPGRWDELGNL LFVDQPLGTGYSYSLAKDFQSNNEKMANDFSIFFEKFLEEFPERANDEWFIAGESFAGQY IPHIAAKLKEKNLVNLGGLAIGNGWINPLSHYETYLNYLVEKGMVDFESELGQYLHHSWA ECLLAFDKIGSGSGDLSKCESFLGDILYMVSKEPGKACMNMYDISLESTYPTCGMDWPYD LSYLTEFLSTREAMTSLNVNLEKVHDWEECNDDVALQYAREGIESSSKLIQDLVSTVPIL LFYGENDFLCNYLSGEKLTRSLEWNGAVGFQNQSAQPFYLPGYSDQPSGSYVSSRNLTFA RIVEASHMVPYDHPNEMKTLITAFFNNDFASLPSVPKPSPDLGNGNYKWLYLGLIPVALT IIILFSIYLCRRFGLFGLSKQRYQPISPTP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/871 Sequence name : 871 Sequence length : 510 VALUES OF COMPUTED PARAMETERS Coef20 : 4.367 CoefTot : 0.144 ChDiff : -30 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.206 2.624 0.561 0.920 MesoH : -0.086 0.485 -0.264 0.317 MuHd_075 : 20.678 21.955 6.387 5.705 MuHd_095 : 24.075 17.784 7.346 5.855 MuHd_100 : 28.386 23.065 9.363 6.829 MuHd_105 : 28.810 22.709 9.080 6.433 Hmax_075 : 19.700 27.883 4.881 8.050 Hmax_095 : 17.850 21.500 3.913 6.860 Hmax_100 : 19.300 22.700 4.336 7.200 Hmax_105 : 17.238 25.000 4.895 6.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8475 0.1525 DFMC : 0.9172 0.0828
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 510 SPBC16G5.09 MISKLLKIVLLTAGVIGNTLADSRIHEQYLVKAFPNEPVDYEGRMHAGHLNQTDQLDGDLFFWMFESVKPEYEHRSILWL 80 NGGPGCSSEDGSLMEVGPFRLDDNNTFQLNPGRWDELGNLLFVDQPLGTGYSYSLAKDFQSNNEKMANDFSIFFEKFLEE 160 FPERANDEWFIAGESFAGQYIPHIAAKLKEKNLVNLGGLAIGNGWINPLSHYETYLNYLVEKGMVDFESELGQYLHHSWA 240 ECLLAFDKIGSGSGDLSKCESFLGDILYMVSKEPGKACMNMYDISLESTYPTCGMDWPYDLSYLTEFLSTREAMTSLNVN 320 LEKVHDWEECNDDVALQYAREGIESSSKLIQDLVSTVPILLFYGENDFLCNYLSGEKLTRSLEWNGAVGFQNQSAQPFYL 400 PGYSDQPSGSYVSSRNLTFARIVEASHMVPYDHPNEMKTLITAFFNNDFASLPSVPKPSPDLGNGNYKWLYLGLIPVALT 480 IIILFSIYLCRRFGLFGLSKQRYQPISPTP 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC16G5.09 4 ---MISK|LL 0.064 . SPBC16G5.09 7 MISKLLK|IV 0.068 . SPBC16G5.09 24 NTLADSR|IH 0.080 . SPBC16G5.09 32 HEQYLVK|AF 0.061 . SPBC16G5.09 44 PVDYEGR|MH 0.086 . SPBC16G5.09 69 WMFESVK|PE 0.060 . SPBC16G5.09 75 KPEYEHR|SI 0.134 . SPBC16G5.09 100 MEVGPFR|LD 0.090 . SPBC16G5.09 113 FQLNPGR|WD 0.085 . SPBC16G5.09 137 YSYSLAK|DF 0.072 . SPBC16G5.09 145 FQSNNEK|MA 0.070 . SPBC16G5.09 156 FSIFFEK|FL 0.074 . SPBC16G5.09 164 LEEFPER|AN 0.094 . SPBC16G5.09 187 IPHIAAK|LK 0.089 . SPBC16G5.09 189 HIAAKLK|EK 0.067 . SPBC16G5.09 191 AAKLKEK|NL 0.062 . SPBC16G5.09 222 LNYLVEK|GM 0.070 . SPBC16G5.09 248 CLLAFDK|IG 0.063 . SPBC16G5.09 258 GSGDLSK|CE 0.064 . SPBC16G5.09 272 ILYMVSK|EP 0.073 . SPBC16G5.09 276 VSKEPGK|AC 0.064 . SPBC16G5.09 311 TEFLSTR|EA 0.119 . SPBC16G5.09 323 LNVNLEK|VH 0.067 . SPBC16G5.09 340 VALQYAR|EG 0.068 . SPBC16G5.09 348 GIESSSK|LI 0.064 . SPBC16G5.09 377 NYLSGEK|LT 0.052 . SPBC16G5.09 380 SGEKLTR|SL 0.162 . SPBC16G5.09 415 GSYVSSR|NL 0.121 . SPBC16G5.09 421 RNLTFAR|IV 0.194 . SPBC16G5.09 438 DHPNEMK|TL 0.068 . SPBC16G5.09 457 SLPSVPK|PS 0.064 . SPBC16G5.09 468 LGNGNYK|WL 0.072 . SPBC16G5.09 491 FSIYLCR|RF 0.083 . SPBC16G5.09 492 SIYLCRR|FG 0.107 . SPBC16G5.09 500 GLFGLSK|QR 0.058 . SPBC16G5.09 502 FGLSKQR|YQ 0.075 . ____________________________^_________________

  • Fasta :-

    >SPBC16G5.09 ATCCGAATTGCGGACCCCATTCCTTTGTATTCAATCTGGGGATCATATAGAAAACTGTCG ATTTGATTGTGAGAGCATGATTTCGAAGTTACTGAAAATAGTCCTTTTAACTGCAGGTGT TATTGGCAACACACTTGCTGATTCTAGAATTCATGAACAATATCTTGTAAAAGCATTTCC TAATGAGCCTGTTGATTATGAGGGAAGAATGCATGCTGGACACTTAAATCAAACGGATCA GCTGGATGGTGATTTGTTTTTCTGGATGTTTGAATCCGTAAAACCCGAATACGAACATCG TTCTATTCTTTGGTTAAATGGAGGTCCTGGCTGCTCTTCAGAAGACGGCTCGCTGATGGA AGTTGGACCATTCCGTCTTGATGACAATAATACATTCCAATTGAACCCTGGACGCTGGGA CGAATTGGGTAATTTGCTTTTCGTAGACCAACCCCTAGGCACAGGGTATTCATACTCTCT GGCTAAGGATTTTCAATCTAACAATGAGAAAATGGCCAATGATTTTTCTATTTTCTTTGA GAAATTCTTGGAGGAGTTCCCAGAAAGAGCAAATGATGAATGGTTTATCGCCGGAGAATC ATTTGCTGGTCAATACATTCCCCATATCGCTGCAAAGTTGAAAGAAAAAAATCTTGTTAA CTTGGGAGGCCTTGCAATCGGAAATGGATGGATTAACCCACTTTCTCATTATGAAACATA CCTAAATTATTTGGTAGAAAAAGGCATGGTTGATTTTGAATCAGAGCTGGGTCAATATTT ACATCATTCTTGGGCGGAATGTTTACTTGCTTTTGACAAGATAGGTTCCGGATCTGGTGA TTTATCTAAGTGCGAAAGTTTTCTTGGCGATATTTTATACATGGTGTCAAAGGAACCTGG GAAAGCATGTATGAACATGTATGACATTAGCTTAGAATCGACATATCCTACTTGTGGAAT GGACTGGCCTTACGATCTTTCCTATCTTACTGAATTTTTAAGTACTCGTGAAGCGATGAC TTCCTTAAACGTTAACCTCGAAAAGGTTCATGATTGGGAAGAATGTAATGACGACGTTGC CCTACAATATGCTCGTGAAGGGATTGAGTCCTCATCTAAGTTAATCCAGGACCTTGTATC TACGGTTCCTATTTTGTTGTTTTACGGCGAAAATGACTTTCTTTGTAATTATTTATCTGG CGAAAAATTAACCCGATCACTGGAGTGGAATGGTGCTGTTGGTTTTCAAAATCAATCTGC TCAACCATTTTATCTTCCGGGCTATTCTGATCAACCATCGGGCTCCTATGTTAGTTCCCG GAACCTGACCTTTGCTCGCATAGTTGAAGCTAGTCACATGGTTCCATACGATCATCCTAA TGAAATGAAGACCTTGATTACTGCTTTCTTTAATAATGACTTTGCCAGCTTACCATCGGT ACCTAAACCCTCTCCGGATTTAGGTAATGGAAACTACAAATGGCTTTATTTGGGTTTGAT TCCTGTTGCTTTAACTATCATTATTTTATTCTCAATTTATTTGTGCAGGAGATTTGGATT ATTTGGTCTTAGCAAACAACGCTACCAACCTATATCTCCAACTCCTTAGACTGTATATAA ATCTTTTCTGTCGGTTTTTACTTTCACATACAGATTTTCTGCTCTTTATTTTAATCATTT AACTTTTAATCTTGCTTTATCGGTGGTAGAATTTATTTTTTTATCTTGGAACGTTCTTCC CTGGTTTTAAAAAATCTGCGATTATCACCATAAATTTTATCTCTCATCTTTAATCAAATT TCACTTATGGATACATTCTTTGAATTTTTATTTTTGCACATAGTCTCTAAATGATCTCAA ATCATGAATATGAAATATCATGTACCAAACATTGTCTTATAGCTATTGTTTGTT
  • Download Fasta

  • Fasta :-

    MISKLLKIVLLTAGVIGNTLADSRIHEQYLVKAFPNEPVDYEGRMHAGHLNQTDQLDGDL FFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNNTFQLNPGRWDELGNL LFVDQPLGTGYSYSLAKDFQSNNEKMANDFSIFFEKFLEEFPERANDEWFIAGESFAGQY IPHIAAKLKEKNLVNLGGLAIGNGWINPLSHYETYLNYLVEKGMVDFESELGQYLHHSWA ECLLAFDKIGSGSGDLSKCESFLGDILYMVSKEPGKACMNMYDISLESTYPTCGMDWPYD LSYLTEFLSTREAMTSLNVNLEKVHDWEECNDDVALQYAREGIESSSKLIQDLVSTVPIL LFYGENDFLCNYLSGEKLTRSLEWNGAVGFQNQSAQPFYLPGYSDQPSGSYVSSRNLTFA RIVEASHMVPYDHPNEMKTLITAFFNNDFASLPSVPKPSPDLGNGNYKWLYLGLIPVALT IIILFSIYLCRRFGLFGLSKQRYQPISPTP

    No Results
    No Results
IDSitePositionGscoreIscore
SPBC16G5.09T5090.5560.526
IDSitePositionGscoreIscore
SPBC16G5.09T5090.5560.526
IDSitePeptideScoreMethod
SPBC16G5.09257 SSGDLSKCES0.994unsp

SPBC16G5.09      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India