SPBC1709.07 | 3-keto sterol reductase Erg27 (predicted)

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No Results

  • Fasta :-

    >SPBC1709.07 MSFRKYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKE FFPDRKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNAGAWDLEGIQWLKAIFST LINPIQALTHPTFYKETAGRVSNDSLGYIFESNVFGHFYLKNRLAELKVLRSSTKVVLTS SLVAEKKSLDFEDLQCFHGEQPYQSSKRLLDVLHYAELEKGLPFEQYLVHPGLCTTNMYE TFLGPILVMCAKLGFYICRLLGSPWHTISPYVAAFAFLWTALHATKEDQSIKWGAAVTRF GHERVLSTPVELILPSEQEKALEYMTKLYQEWKKKLVS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/923 Sequence name : 923 Sequence length : 338 VALUES OF COMPUTED PARAMETERS Coef20 : 3.939 CoefTot : -0.646 ChDiff : 2 ZoneTo : 33 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.559 1.841 0.346 0.664 MesoH : 0.421 0.647 -0.157 0.389 MuHd_075 : 19.811 15.507 6.009 5.523 MuHd_095 : 20.885 19.274 5.620 5.824 MuHd_100 : 18.353 17.085 5.590 4.964 MuHd_105 : 22.710 14.406 6.299 5.249 Hmax_075 : 13.100 14.400 3.687 5.610 Hmax_095 : 14.175 17.325 3.066 6.265 Hmax_100 : 14.000 14.300 2.337 5.860 Hmax_105 : 12.600 11.783 1.943 4.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4518 0.5482 DFMC : 0.6582 0.3418
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 338 SPBC1709.07 MSFRKYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPDRKIRLEYVLLDLSNMA 80 SVEAAVQDIATRFPKLDFVYLNAGAWDLEGIQWLKAIFSTLINPIQALTHPTFYKETAGRVSNDSLGYIFESNVFGHFYL 160 KNRLAELKVLRSSTKVVLTSSLVAEKKSLDFEDLQCFHGEQPYQSSKRLLDVLHYAELEKGLPFEQYLVHPGLCTTNMYE 240 TFLGPILVMCAKLGFYICRLLGSPWHTISPYVAAFAFLWTALHATKEDQSIKWGAAVTRFGHERVLSTPVELILPSEQEK 320 ALEYMTKLYQEWKKKLVS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC1709.07 4 ---MSFR|KY 0.084 . SPBC1709.07 5 --MSFRK|YA 0.100 . SPBC1709.07 23 GFGIATR|LL 0.078 . SPBC1709.07 31 LQFYQPR|LQ 0.090 . SPBC1709.07 46 TVILTCR|SR 0.176 . SPBC1709.07 48 ILTCRSR|EK 0.065 . SPBC1709.07 50 TCRSREK|AE 0.070 . SPBC1709.07 56 KAEDACR|RL 0.076 . SPBC1709.07 57 AEDACRR|LK 0.106 . SPBC1709.07 59 DACRRLK|EF 0.105 . SPBC1709.07 65 KEFFPDR|KI 0.080 . SPBC1709.07 66 EFFPDRK|IR 0.059 . SPBC1709.07 68 FPDRKIR|LE 0.222 . SPBC1709.07 92 VQDIATR|FP 0.070 . SPBC1709.07 95 IATRFPK|LD 0.129 . SPBC1709.07 115 EGIQWLK|AI 0.061 . SPBC1709.07 135 THPTFYK|ET 0.066 . SPBC1709.07 140 YKETAGR|VS 0.101 . SPBC1709.07 161 FGHFYLK|NR 0.058 . SPBC1709.07 163 HFYLKNR|LA 0.096 . SPBC1709.07 168 NRLAELK|VL 0.063 . SPBC1709.07 171 AELKVLR|SS 0.140 . SPBC1709.07 175 VLRSSTK|VV 0.069 . SPBC1709.07 186 SSLVAEK|KS 0.060 . SPBC1709.07 187 SLVAEKK|SL 0.165 . SPBC1709.07 207 QPYQSSK|RL 0.071 . SPBC1709.07 208 PYQSSKR|LL 0.170 . SPBC1709.07 220 HYAELEK|GL 0.061 . SPBC1709.07 252 ILVMCAK|LG 0.060 . SPBC1709.07 259 LGFYICR|LL 0.105 . SPBC1709.07 286 TALHATK|ED 0.061 . SPBC1709.07 292 KEDQSIK|WG 0.064 . SPBC1709.07 299 WGAAVTR|FG 0.109 . SPBC1709.07 304 TRFGHER|VL 0.117 . SPBC1709.07 320 LPSEQEK|AL 0.080 . SPBC1709.07 327 ALEYMTK|LY 0.064 . SPBC1709.07 333 KLYQEWK|KK 0.060 . SPBC1709.07 334 LYQEWKK|KL 0.093 . SPBC1709.07 335 YQEWKKK|LV 0.166 . ____________________________^_________________

  • Fasta :-

    >SPBC1709.07 CGAACGTATACTACATAGCTGACCAGGGTAGATATCAAACGATTTTTACTACTACCATTG TAAAGCCCTAACAATGAGTTTTCGTAAATATGCCTTAATTACCGGCTCCAACAGTGGTCT TGGTTTTGGAATAGCTACGCGTCTTTTGCAGTTCTACCAACCGCGTTTGCAAGATGAACC CGAAGTATTCACGGTAATTCTTACATGCAGGAGTCGTGAAAAGGCAGAAGATGCCTGTAG AAGATTGAAAGAATTCTTTCCCGATAGGAAAATACGGTTGGAATACGTTTTGTTAGACTT GTCGAATATGGCATCAGTGGAAGCTGCGGTGCAAGATATCGCTACTAGATTCCCTAAATT AGATTTTGTTTACCTAAATGCTGGTGCTTGGGACCTGGAAGGTATTCAATGGCTAAAGGC TATCTTTTCTACTTTGATCAACCCTATCCAGGCACTGACGCATCCAACCTTTTACAAAGA GACTGCTGGACGTGTGAGCAATGACTCCCTCGGTTACATATTTGAAAGTAATGTTTTTGG TCATTTTTATTTGAAAAATCGCCTGGCCGAACTAAAAGTGCTCCGTTCGTCAACAAAGGT AGTCCTTACAAGCAGTTTAGTAGCAGAAAAAAAATCCCTTGATTTTGAAGACCTACAATG TTTTCACGGCGAGCAACCCTATCAATCTTCAAAGCGTTTGTTAGATGTGTTACACTATGC AGAACTTGAAAAGGGACTCCCTTTTGAACAATACCTTGTCCATCCCGGACTATGTACTAC TAACATGTATGAAACTTTCCTCGGTCCTATATTGGTTATGTGTGCAAAGCTCGGTTTCTA TATTTGTCGCTTACTTGGAAGTCCTTGGCATACAATTTCTCCATACGTTGCTGCTTTTGC TTTTCTTTGGACTGCTTTACATGCTACCAAAGAAGATCAATCTATCAAGTGGGGAGCAGC CGTGACTCGTTTTGGTCATGAAAGAGTCCTCTCTACTCCTGTGGAATTAATTTTGCCTTC AGAGCAAGAGAAAGCTTTAGAATATATGACAAAACTTTACCAGGAATGGAAAAAGAAGCT GGTTTCGTAAAGGGAAACATTTACATATTCTCTTGCGCGGAGGCCTTGATAAAAATCTGG AGTACCAGTTAATTTTAAAGTGCACGAGACGAGGGGAGTTATGAAAGAACAATCCCTGAT TCATTGCATTCTCAGTAAAACATTTTGAAAATTGCTTTTATCAAATTTTGCTACAATCGG TATAGATATCTTGACAAAATGAATAGATAAGGGGATTTTAACCAAGTCTGGAATATAGTT TATGTCTCAATTTAGTTAATACAAACATACGAATTTATTAGAACCTCGGACTCGGAAAAG TTTATATGAAGAATTCCGCGAGTTGCCGTCTTTGTCTCATGCTAGCTATAAGACCGCATT TCGTAAATTGTGTATCTGGATATATTTTATCAACCAGCAAAATTAAATTATGAAAAATAG CAATAATTCAAGTTATTAAATTTT
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  • Fasta :-

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  • title: active site
  • coordinates: N153,S181,Y203,K207
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC1709.07173 SVLRSSTKVV0.992unspSPBC1709.07290 SKEDQSIKWG0.996unsp

SPBC1709.07      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India