SPBC17D11.01 | NEDD8 protease Nep1

_IDPredictionOTHERSPmTPCS_Position
SPBC17D11.01OTHER0.9999390.0000590.000002
No Results

  • Fasta :-

    >SPBC17D11.01 MSSSPTVLELFDVCFKQEDVDSLKKPNWFTDVSIDYVDELIEHLWFPSYPNQANEILLLR PSLVFLLAEAAISPEELKVALPKKLMNCKYLFMPINDLDKHAAGSGGSHWSLMVASIPDG QCYYYDSLSNGKTKDCRSALARVSDLFKKKFTIECMPVQQQRNGYDCGAHVCAFTLELVR RLLHSPMPTSSMWNLSTFQPDVTAIREQLSRCLDHIINSLGTRVSGDFDEDFPTGTVFFD LESHLPLLDVALPVLPKSSDSSETSHESSNSNLKKSSESGSTNHHNNHESDKDLHHEGHH HHHHHHHHHHSHDDDPSSPAEKKQNHVPSPSEKIQDHVPSPSEKKQDRVPSPSNNKEDHL PLLSDEKLDKSAIDKIEPTPLPSVHMNSHIAKGELPKFHNSTDNPFLTPPEELVSGDFPF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/613 Sequence name : 613 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 3.764 CoefTot : 0.205 ChDiff : -23 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.224 1.988 0.110 0.604 MesoH : -0.500 0.352 -0.397 0.242 MuHd_075 : 18.806 7.158 4.801 2.809 MuHd_095 : 20.442 13.866 7.242 3.857 MuHd_100 : 21.494 15.066 7.418 4.332 MuHd_105 : 24.082 16.224 7.644 4.567 Hmax_075 : 17.033 10.500 2.868 4.912 Hmax_095 : 7.350 11.800 1.443 3.970 Hmax_100 : 8.600 11.800 1.855 4.320 Hmax_105 : 9.275 12.133 2.261 4.034 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9864 0.0136 DFMC : 0.9804 0.0196
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 SPBC17D11.01 MSSSPTVLELFDVCFKQEDVDSLKKPNWFTDVSIDYVDELIEHLWFPSYPNQANEILLLRPSLVFLLAEAAISPEELKVA 80 LPKKLMNCKYLFMPINDLDKHAAGSGGSHWSLMVASIPDGQCYYYDSLSNGKTKDCRSALARVSDLFKKKFTIECMPVQQ 160 QRNGYDCGAHVCAFTLELVRRLLHSPMPTSSMWNLSTFQPDVTAIREQLSRCLDHIINSLGTRVSGDFDEDFPTGTVFFD 240 LESHLPLLDVALPVLPKSSDSSETSHESSNSNLKKSSESGSTNHHNNHESDKDLHHEGHHHHHHHHHHHHSHDDDPSSPA 320 EKKQNHVPSPSEKIQDHVPSPSEKKQDRVPSPSNNKEDHLPLLSDEKLDKSAIDKIEPTPLPSVHMNSHIAKGELPKFHN 400 STDNPFLTPPEELVSGDFPF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC17D11.01 16 LFDVCFK|QE 0.053 . SPBC17D11.01 24 EDVDSLK|KP 0.058 . SPBC17D11.01 25 DVDSLKK|PN 0.069 . SPBC17D11.01 60 NEILLLR|PS 0.070 . SPBC17D11.01 78 ISPEELK|VA 0.059 . SPBC17D11.01 83 LKVALPK|KL 0.068 . SPBC17D11.01 84 KVALPKK|LM 0.090 . SPBC17D11.01 89 KKLMNCK|YL 0.068 . SPBC17D11.01 100 PINDLDK|HA 0.075 . SPBC17D11.01 132 DSLSNGK|TK 0.052 . SPBC17D11.01 134 LSNGKTK|DC 0.097 . SPBC17D11.01 137 GKTKDCR|SA 0.134 . SPBC17D11.01 142 CRSALAR|VS 0.110 . SPBC17D11.01 148 RVSDLFK|KK 0.082 . SPBC17D11.01 149 VSDLFKK|KF 0.087 . SPBC17D11.01 150 SDLFKKK|FT 0.149 . SPBC17D11.01 162 MPVQQQR|NG 0.116 . SPBC17D11.01 180 FTLELVR|RL 0.062 . SPBC17D11.01 181 TLELVRR|LL 0.157 . SPBC17D11.01 206 PDVTAIR|EQ 0.061 . SPBC17D11.01 211 IREQLSR|CL 0.145 . SPBC17D11.01 223 INSLGTR|VS 0.112 . SPBC17D11.01 257 ALPVLPK|SS 0.098 . SPBC17D11.01 274 SSNSNLK|KS 0.074 . SPBC17D11.01 275 SNSNLKK|SS 0.316 . SPBC17D11.01 292 NNHESDK|DL 0.127 . SPBC17D11.01 322 PSSPAEK|KQ 0.065 . SPBC17D11.01 323 SSPAEKK|QN 0.102 . SPBC17D11.01 333 VPSPSEK|IQ 0.081 . SPBC17D11.01 344 VPSPSEK|KQ 0.075 . SPBC17D11.01 345 PSPSEKK|QD 0.077 . SPBC17D11.01 348 SEKKQDR|VP 0.103 . SPBC17D11.01 356 PSPSNNK|ED 0.053 . SPBC17D11.01 367 PLLSDEK|LD 0.054 . SPBC17D11.01 370 SDEKLDK|SA 0.100 . SPBC17D11.01 375 DKSAIDK|IE 0.065 . SPBC17D11.01 392 MNSHIAK|GE 0.098 . SPBC17D11.01 397 AKGELPK|FH 0.065 . ____________________________^_________________

  • Fasta :-

    >SPBC17D11.01 ATTTTAACACTCGTGTTACTCTTCCGTTCGAGCTGTTTTGTTTGCGGACCTATTGTTTGT TTAAATTCCTTTTTTTCCCCATTTCGTACTTACTTTTAAACAATTTTTAAATGAGCAGTT CTCCAACCGTTCTTGAATTATTTGATGTGTGTTTTAAGCAGGAAGACGTGGATAGCTTAA AAAAGCCAAACTGGTTCACTGATGTGAGTATTGATTATGTTGACGAGTTAATTGAGCACC TATGGTTTCCCTCATACCCAAATCAAGCTAATGAAATTTTGCTGCTTCGCCCTTCGTTAG TTTTTCTACTAGCAGAAGCTGCTATTTCTCCTGAAGAGCTCAAAGTTGCTTTGCCTAAAA AGTTAATGAACTGCAAATATTTATTTATGCCTATCAATGATTTGGATAAACATGCGGCAG GAAGTGGAGGTTCACACTGGTCTTTAATGGTCGCAAGTATTCCTGATGGGCAATGTTACT ATTATGATTCTCTCAGCAACGGAAAGACAAAAGATTGTCGCAGTGCCTTGGCCCGTGTTT CGGATCTTTTCAAAAAAAAATTTACAATAGAGTGTATGCCCGTACAACAACAAAGAAATG GATATGATTGTGGAGCACACGTTTGTGCTTTTACCCTTGAACTGGTTCGGCGTTTGTTAC ATTCACCGATGCCCACTAGCTCTATGTGGAATTTGTCTACATTTCAGCCAGATGTAACAG CTATTCGGGAGCAGTTGAGCCGTTGCTTAGACCATATAATTAACTCCTTGGGGACAAGGG TAAGCGGCGATTTTGACGAGGACTTTCCTACTGGCACTGTGTTTTTTGACTTAGAATCTC ACCTTCCTCTTCTCGATGTTGCCCTCCCGGTTCTACCTAAATCATCCGACTCATCTGAAA CATCACATGAAAGCTCTAACTCTAATTTGAAGAAGTCTTCAGAGTCAGGATCTACTAATC ACCATAATAACCATGAAAGCGATAAGGACCTGCATCATGAAGGCCATCATCATCACCATC ATCACCACCATCATCATCACAGTCATGACGATGACCCTTCCTCTCCTGCTGAGAAGAAAC AGAATCATGTGCCTTCACCTTCTGAAAAGATACAAGATCATGTGCCTTCACCTTCTGAAA AAAAACAAGATCGTGTTCCTTCACCTTCTAACAACAAAGAAGATCATTTGCCATTACTCT CTGATGAGAAACTTGACAAATCTGCGATTGACAAAATTGAGCCTACGCCATTACCTTCTG TCCATATGAACAGTCATATAGCGAAGGGGGAGTTACCGAAATTTCATAATAGCACTGATA ATCCTTTTCTCACTCCTCCGGAAGAACTTGTATCTGGTGATTTCCCTTTTTGATGCTACA CTTGCGTTGTTTAGTTTCGAATATACAAACTAGCGGGAAGGCTTGTTTCAACTCAAACAA TCTGAGTTTTATCCTATCTTGTGATGTGAATGGTTGTGTAATTTTTATCAGCAGTCGCTA AATCTTTTGCTGTTTACAAATATGTTATTATTATCACGAGTGCAATAATCGTTTGCTTAA TTATTGATTGAAAAATGTTTATACAAGAGAAATTATTTATTTATTAGTAAATGACTTATC ACTTCTTTATTTTTAGGTCGTTCATTATTATCAAAAAAGTTTGATAGTAAATTTCAAAAA TTTTCATCCACA
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  • Fasta :-

    MSSSPTVLELFDVCFKQEDVDSLKKPNWFTDVSIDYVDELIEHLWFPSYPNQANEILLLR PSLVFLLAEAAISPEELKVALPKKLMNCKYLFMPINDLDKHAAGSGGSHWSLMVASIPDG QCYYYDSLSNGKTKDCRSALARVSDLFKKKFTIECMPVQQQRNGYDCGAHVCAFTLELVR RLLHSPMPTSSMWNLSTFQPDVTAIREQLSRCLDHIINSLGTRVSGDFDEDFPTGTVFFD LESHLPLLDVALPVLPKSSDSSETSHESSNSNLKKSSESGSTNHHNNHESDKDLHHEGHH HHHHHHHHHHSHDDDPSSPAEKKQNHVPSPSEKIQDHVPSPSEKKQDRVPSPSNNKEDHL PLLSDEKLDKSAIDKIEPTPLPSVHMNSHIAKGELPKFHNSTDNPFLTPPEELVSGDFPF

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC17D11.01262 SSSDSSETSH0.995unspSPBC17D11.01262 SSSDSSETSH0.995unspSPBC17D11.01262 SSSDSSETSH0.995unspSPBC17D11.01265 SSSETSHESS0.991unspSPBC17D11.01276 SNLKKSSESG0.994unspSPBC17D11.01318 SDDPSSPAEK0.996unspSPBC17D11.01340 SDHVPSPSEK0.992unspSPBC17D11.01351 SDRVPSPSNN0.996unspSPBC17D11.01371 SKLDKSAIDK0.99unspSPBC17D11.0173 SEAAISPEEL0.998unspSPBC17D11.01261 SKSSDSSETS0.993unsp


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India