SPBC2D10.07c | mitochondrial inner membrane peptidase complex catalytic subunit (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC2D10.07cOTHER0.5028420.4367990.060359
No Results

  • Fasta :-

    >SPBC2D10.07c MAGMFRIPIAVVQIAAFVHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSC SVGDVVVSAKPSDSKQHVCKRIIGMPGDTIYVDPTSSNKKITIPLGHVWLAGDNIAHSLD SRNYGPVPMGLIKAKVIARVWPHPHWMSNILNDIDVE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/111 Sequence name : 111 Sequence length : 157 VALUES OF COMPUTED PARAMETERS Coef20 : 4.291 CoefTot : -2.102 ChDiff : 2 ZoneTo : 44 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.147 1.812 0.134 0.604 MesoH : -0.276 0.418 -0.327 0.231 MuHd_075 : 22.566 19.111 7.075 5.005 MuHd_095 : 23.787 21.767 7.734 5.980 MuHd_100 : 27.390 27.314 9.516 7.098 MuHd_105 : 34.236 30.288 10.657 7.847 Hmax_075 : 20.100 24.100 4.157 7.720 Hmax_095 : 15.400 19.775 1.479 6.667 Hmax_100 : 20.500 28.200 5.155 8.400 Hmax_105 : 21.233 23.537 5.579 8.867 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9339 0.0661 DFMC : 0.9642 0.0358
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 157 SPBC2D10.07c MAGMFRIPIAVVQIAAFVHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSKQHVCK 80 RIIGMPGDTIYVDPTSSNKKITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWPHPHWMSNILNDIDVE 160 .........................................................P...................... 80 ............................................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPBC2D10.07c 6 -MAGMFR|IP 0.087 . SPBC2D10.07c 51 EFVLLDK|LH 0.056 . SPBC2D10.07c 55 LDKLHGR|FA 0.110 . SPBC2D10.07c 58 LHGRFAR|SC 0.657 *ProP* SPBC2D10.07c 70 DVVVSAK|PS 0.073 . SPBC2D10.07c 75 AKPSDSK|QH 0.056 . SPBC2D10.07c 80 SKQHVCK|RI 0.086 . SPBC2D10.07c 81 KQHVCKR|II 0.337 . SPBC2D10.07c 99 DPTSSNK|KI 0.063 . SPBC2D10.07c 100 PTSSNKK|IT 0.127 . SPBC2D10.07c 122 AHSLDSR|NY 0.126 . SPBC2D10.07c 133 VPMGLIK|AK 0.066 . SPBC2D10.07c 135 MGLIKAK|VI 0.077 . SPBC2D10.07c 139 KAKVIAR|VW 0.086 . ____________________________^_________________

  • Fasta :-

    >SPBC2D10.07c ATGGCTGGCATGTTCCGTATTCCTATTGCCGTCGTTCAGATTGCTGCATTTGTGCATCAA ATTCATGAGTATCTTTTTCAAGTGCAAATGACATCGGGTCCAAGTATGATGCCAACATTA AATTCTGGTGGTGAATTCGTTTTGTTAGATAAATTGCATGGTAGGTTTGCTCGTTCATGT TCTGTAGGAGATGTTGTTGTTTCGGCAAAACCTTCCGATTCAAAGCAACACGTGTGCAAA CGAATCATTGGAATGCCAGGAGATACAATTTATGTCGATCCCACCTCTTCAAATAAAAAA ATAACTATACCTTTAGGTCATGTTTGGCTTGCAGGAGATAACATTGCTCACTCACTTGAT AGTCGAAATTACGGACCTGTTCCAATGGGCCTTATTAAGGCTAAAGTTATAGCTCGTGTA TGGCCACATCCCCACTGGATGTCTAACATTTTGAATGACATAGATGTGGAATAGGTATTA TGAGCATTAAATATTATTCTACAACTCACTCTTGGCTCACCAGATGTTAATTGAAATGTA TGAATTTATTAATATTTTTATGTTAGTTGGCAATTACTTGTTTGAAAAAAATGCTAATTC TAAAAACAAAAGAGAGACTTCAAAGATCGCCTCATAAACACTAA
  • Download Fasta

  • Fasta :-

    MAGMFRIPIAVVQIAAFVHQIHEYLFQVQMTSGPSMMPTLNSGGEFVLLDKLHGRFARSC SVGDVVVSAKPSDSKQHVCKRIIGMPGDTIYVDPTSSNKKITIPLGHVWLAGDNIAHSLD SRNYGPVPMGLIKAKVIARVWPHPHWMSNILNDIDVE

  • title: Catalytic site
  • coordinates: S35,K80
No Results
No Results
No Results

SPBC2D10.07c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India