SPBC337.07c | carboxypeptidase Ecm14 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC337.07cOTHER0.6633350.3358480.000817
No Results

  • Fasta :-

    >SPBC337.07c MAYNKSLKSLVFILLASQIVFVLFLCYGKSSRELGVKWNSDIRSWMTSYVGFNGETAAIS EEQLIWAEKIPDYNEEIVVRLHLEEENNLSDILQKAQSQNLDIWDYNFDHVDLRLKEENF DFWKSQYRSDILINNLTETLFESIVPDTTNSPFSTEAFLQAVENGHLNHEMFTSFTDIFF KSYQNLESINSWLRLMASLYKDLSELVPVGITAEGRTILGLKLNGRHPSDNGEKIRNKKV IIIQGGSHAREWIGIPSVCYAAWQLLAKYDSDGHVRKLLDKFEWIFIPVLNVDGYEYTWS NDRLWSKNRQPLNNSECFGINLDANWAFGFNGNIDPCSNEYGGLSPFQANETMALFNLIT ESLSQEQKKVVGFLDVHSYSQSVLWPYAYTCDLFPPDTENFEELAIGLVKELHRVNSRYY TYQQACIPYDGFHKHYLPGTAIDWVYFAADVAWPFNIRLRDMGDYGYLLPAKQIVPTAKE FFAMILYYGEFIAEYAF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/209 Sequence name : 209 Sequence length : 497 VALUES OF COMPUTED PARAMETERS Coef20 : 4.555 CoefTot : 0.517 ChDiff : -23 ZoneTo : 32 KR : 4 DE : 0 CleavSite : 42 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.306 2.882 0.508 0.887 MesoH : -0.486 0.339 -0.392 0.282 MuHd_075 : 23.411 18.280 6.897 5.305 MuHd_095 : 20.279 13.295 6.543 4.910 MuHd_100 : 23.027 13.799 7.019 4.832 MuHd_105 : 23.765 14.120 8.268 4.806 Hmax_075 : 14.787 19.800 2.067 8.100 Hmax_095 : 14.438 16.450 3.605 5.775 Hmax_100 : 15.500 19.800 4.892 5.430 Hmax_105 : 15.300 22.100 3.869 5.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8185 0.1815 DFMC : 0.7868 0.2132
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 497 SPBC337.07c MAYNKSLKSLVFILLASQIVFVLFLCYGKSSRELGVKWNSDIRSWMTSYVGFNGETAAISEEQLIWAEKIPDYNEEIVVR 80 LHLEEENNLSDILQKAQSQNLDIWDYNFDHVDLRLKEENFDFWKSQYRSDILINNLTETLFESIVPDTTNSPFSTEAFLQ 160 AVENGHLNHEMFTSFTDIFFKSYQNLESINSWLRLMASLYKDLSELVPVGITAEGRTILGLKLNGRHPSDNGEKIRNKKV 240 IIIQGGSHAREWIGIPSVCYAAWQLLAKYDSDGHVRKLLDKFEWIFIPVLNVDGYEYTWSNDRLWSKNRQPLNNSECFGI 320 NLDANWAFGFNGNIDPCSNEYGGLSPFQANETMALFNLITESLSQEQKKVVGFLDVHSYSQSVLWPYAYTCDLFPPDTEN 400 FEELAIGLVKELHRVNSRYYTYQQACIPYDGFHKHYLPGTAIDWVYFAADVAWPFNIRLRDMGDYGYLLPAKQIVPTAKE 480 FFAMILYYGEFIAEYAF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC337.07c 5 --MAYNK|SL 0.073 . SPBC337.07c 8 AYNKSLK|SL 0.084 . SPBC337.07c 29 LFLCYGK|SS 0.063 . SPBC337.07c 32 CYGKSSR|EL 0.109 . SPBC337.07c 37 SRELGVK|WN 0.088 . SPBC337.07c 43 KWNSDIR|SW 0.185 . SPBC337.07c 69 QLIWAEK|IP 0.064 . SPBC337.07c 80 NEEIVVR|LH 0.081 . SPBC337.07c 95 LSDILQK|AQ 0.083 . SPBC337.07c 114 FDHVDLR|LK 0.090 . SPBC337.07c 116 HVDLRLK|EE 0.051 . SPBC337.07c 124 ENFDFWK|SQ 0.074 . SPBC337.07c 128 FWKSQYR|SD 0.104 . SPBC337.07c 181 FTDIFFK|SY 0.077 . SPBC337.07c 194 SINSWLR|LM 0.070 . SPBC337.07c 201 LMASLYK|DL 0.076 . SPBC337.07c 216 GITAEGR|TI 0.074 . SPBC337.07c 222 RTILGLK|LN 0.062 . SPBC337.07c 226 GLKLNGR|HP 0.099 . SPBC337.07c 234 PSDNGEK|IR 0.057 . SPBC337.07c 236 DNGEKIR|NK 0.109 . SPBC337.07c 238 GEKIRNK|KV 0.089 . SPBC337.07c 239 EKIRNKK|VI 0.379 . SPBC337.07c 250 QGGSHAR|EW 0.111 . SPBC337.07c 268 AWQLLAK|YD 0.078 . SPBC337.07c 276 DSDGHVR|KL 0.094 . SPBC337.07c 277 SDGHVRK|LL 0.134 . SPBC337.07c 281 VRKLLDK|FE 0.069 . SPBC337.07c 303 YTWSNDR|LW 0.078 . SPBC337.07c 307 NDRLWSK|NR 0.061 . SPBC337.07c 309 RLWSKNR|QP 0.078 . SPBC337.07c 368 SLSQEQK|KV 0.086 . SPBC337.07c 369 LSQEQKK|VV 0.183 . SPBC337.07c 410 LAIGLVK|EL 0.063 . SPBC337.07c 414 LVKELHR|VN 0.081 . SPBC337.07c 418 LHRVNSR|YY 0.112 . SPBC337.07c 434 PYDGFHK|HY 0.059 . SPBC337.07c 458 AWPFNIR|LR 0.074 . SPBC337.07c 460 PFNIRLR|DM 0.149 . SPBC337.07c 472 GYLLPAK|QI 0.062 . SPBC337.07c 479 QIVPTAK|EF 0.074 . ____________________________^_________________

  • Fasta :-

    >SPBC337.07c AAACTGTTGTCGTCCCTTACGTAGATAATCAAAGCTGGGCGAAGCGCCAAGCTATATTCT TCTTATTAATTATACCGAACAAGCGTTACTTAATTTATTTATTTCGACGCTTTTCTAAAG GGAATATCTTAATTATTCTATATCTCCTTTTTCCATGTCACTGAAGACTGCTCTTTCTAA CTCATGGCTTACAATAAATCTCTAAAGTCTTTAGTATTTATCCTTTTGGCTTCTCAGATC GTATTTGTATTATTCCTTTGCTACGGAAAAAGTTCTAGAGAACTTGGAGTGAAATGGAAT TCAGATATTCGATCTTGGATGACCAGTTACGTTGGGTTTAATGGCGAGACTGCGGCCATA TCAGAAGAACAGTTAATTTGGGCCGAAAAAATTCCTGATTATAACGAAGAAATAGTAGTC CGTTTGCATTTGGAAGAAGAAAATAATTTGAGCGATATCTTGCAGAAAGCTCAAAGTCAA AACCTTGATATTTGGGACTACAATTTCGATCATGTGGATTTACGTTTAAAAGAAGAAAAT TTTGATTTTTGGAAGAGTCAATATCGTAGTGACATACTTATAAACAATCTGACAGAGACC TTATTTGAAAGCATTGTTCCAGATACTACGAATTCCCCTTTTTCCACAGAAGCTTTCCTT CAAGCCGTTGAAAATGGTCATTTAAATCACGAAATGTTTACTTCCTTTACGGATATTTTT TTCAAGTCATATCAGAATTTAGAATCGATTAATTCCTGGTTGAGGTTGATGGCGTCCCTT TACAAAGATTTAAGTGAACTAGTTCCAGTTGGAATTACAGCGGAAGGTCGAACGATTTTA GGCCTAAAATTGAACGGTCGACATCCTTCCGACAACGGGGAAAAGATTCGTAACAAGAAA GTGATTATTATTCAAGGAGGATCTCATGCTCGTGAGTGGATAGGTATTCCATCTGTTTGC TATGCCGCATGGCAATTGTTGGCAAAATATGATTCCGATGGTCATGTCCGAAAGCTTTTG GATAAATTTGAATGGATTTTTATTCCAGTTTTAAACGTTGATGGTTATGAATATACATGG TCAAACGATAGACTGTGGTCAAAAAACAGACAGCCTCTTAATAATTCCGAGTGTTTTGGC ATAAATCTCGATGCGAATTGGGCATTTGGCTTCAACGGTAATATTGATCCTTGCAGCAAC GAATATGGAGGATTATCACCTTTTCAGGCTAACGAAACTATGGCCTTGTTCAATCTGATA ACTGAATCCTTGTCGCAAGAGCAGAAAAAGGTCGTTGGATTTCTTGATGTGCATTCGTAT TCACAATCTGTTTTGTGGCCTTATGCATATACCTGCGACTTGTTTCCTCCTGATACTGAG AATTTTGAGGAATTAGCAATTGGCTTAGTTAAAGAGTTGCATCGCGTAAATAGTAGATAC TACACATATCAACAAGCATGTATACCGTATGATGGATTTCATAAACATTACCTACCTGGA ACTGCCATTGACTGGGTTTATTTTGCTGCTGATGTAGCATGGCCTTTCAATATTCGATTA CGAGACATGGGTGATTATGGATATTTATTACCTGCTAAACAGATTGTCCCCACAGCTAAG GAATTTTTTGCGATGATTCTTTACTATGGAGAGTTTATCGCTGAGTATGCATTTTAGTCC AAGAAAGATCAATAATTATTCGCTTATCTGTTGGCAATTTTGCCAAATTTAATTATAGTA ATTATTAATTTATGAAAATAAATACCTTCCTTCCAGGTGGTTCAATTGATGCGTTATTTA CCTGTCTTAACAATAAATCCAGTTCTATCAATTAACGTTTTTTAGAACGTTATAAGAATT TA
  • Download Fasta

  • Fasta :-

    MAYNKSLKSLVFILLASQIVFVLFLCYGKSSRELGVKWNSDIRSWMTSYVGFNGETAAIS EEQLIWAEKIPDYNEEIVVRLHLEEENNLSDILQKAQSQNLDIWDYNFDHVDLRLKEENF DFWKSQYRSDILINNLTETLFESIVPDTTNSPFSTEAFLQAVENGHLNHEMFTSFTDIFF KSYQNLESINSWLRLMASLYKDLSELVPVGITAEGRTILGLKLNGRHPSDNGEKIRNKKV IIIQGGSHAREWIGIPSVCYAAWQLLAKYDSDGHVRKLLDKFEWIFIPVLNVDGYEYTWS NDRLWSKNRQPLNNSECFGINLDANWAFGFNGNIDPCSNEYGGLSPFQANETMALFNLIT ESLSQEQKKVVGFLDVHSYSQSVLWPYAYTCDLFPPDTENFEELAIGLVKELHRVNSRYY TYQQACIPYDGFHKHYLPGTAIDWVYFAADVAWPFNIRLRDMGDYGYLLPAKQIVPTAKE FFAMILYYGEFIAEYAF

  • title: Zn binding site
  • coordinates: H248,E251,H377
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC337.07c154 SNSPFSTEAF0.996unspSPBC337.07c364 STESLSQEQK0.993unsp

SPBC337.07c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India