SPBC354.09c | Tre1 family protein, involved in vacuolar protein degradation (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC354.09cOTHER0.9999970.0000030.000001
No Results

  • Fasta :-

    >SPBC354.09c MTDEKHVYVPPPKDPPSYEEVALHSALNNSAPPNDGEQNETSMEEMEIIEPPSEDSSRFP LLRTKLAAIHEGWESACHSFEIRFASTFHRIPFQFLYLAVIATVIILASYYGYFDGVPAW RSVHHYGEDVLLNYIKGCDISDTRQQVMTLSSIPHLAGTVGDSSLLQMIMNRLYYEKGTI VDFREFYAYLNFPQLVSLSIDGDDSFHPSLIESYQVGGYDGVSIPTPATFGGSPSGFVNA PLVYANRGRIEDFEWLVNSGIYVESSIVLVRANQSDFALATANAEKYNASAILIFEDTYL TSLDNLNQVYPAGPYPSANSLYRGSVANHYYYVGDPLTPGWSAHEETNRISPKDANVLPS IVSIPITFNDGIELLKRLQGHGHLVKDSNWCQDLAPVLSEVWTGSKISSPGLEVNVLQDI EDKQKIINIMAQIDGYESDQILVVGAPRDSWCTGASDSSVGTSLLIDVISTFANMAQDLS WKPRRTIVFASWDARQFNAIGSTEFLEYWKESLEAKAVAYINVDVAVSGDTFTARTVPGL KKVIQRAFDVANEEDEMKAANIITDDFDYTSDLTSFLTFAGIPVVNLAFERNEENPTPMP FLGSCEDTVSWIDTFGSEYWENAARLGKIWSYLILFLANDPVVPYDLEDEINGVGEMLKR IPEIPGANALDLRKINEEFSELLESLIRFEDEIREWKSLMMHNSYTVSVKKHPELEGYNA KLARFERSFLDEAGLPGHEWYKHLIYGPNLRNSHSQLFPSIFDALLYGDVEAAQKEVKRI ALALDRAHNEIRFA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/734 Sequence name : 734 Sequence length : 794 VALUES OF COMPUTED PARAMETERS Coef20 : 2.008 CoefTot : 0.000 ChDiff : -52 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.929 2.347 0.358 0.836 MesoH : -0.131 0.493 -0.257 0.312 MuHd_075 : 27.816 5.351 5.224 2.912 MuHd_095 : 8.666 3.876 2.852 2.165 MuHd_100 : 13.042 3.862 2.836 2.338 MuHd_105 : 13.084 2.097 2.571 1.992 Hmax_075 : 3.675 -2.975 -2.526 1.286 Hmax_095 : -6.300 -5.600 -3.911 1.100 Hmax_100 : -2.700 -3.000 -3.259 1.760 Hmax_105 : -2.700 -3.000 -3.510 0.753 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9994 0.0006 DFMC : 0.9980 0.0020
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 794 SPBC354.09c MTDEKHVYVPPPKDPPSYEEVALHSALNNSAPPNDGEQNETSMEEMEIIEPPSEDSSRFPLLRTKLAAIHEGWESACHSF 80 EIRFASTFHRIPFQFLYLAVIATVIILASYYGYFDGVPAWRSVHHYGEDVLLNYIKGCDISDTRQQVMTLSSIPHLAGTV 160 GDSSLLQMIMNRLYYEKGTIVDFREFYAYLNFPQLVSLSIDGDDSFHPSLIESYQVGGYDGVSIPTPATFGGSPSGFVNA 240 PLVYANRGRIEDFEWLVNSGIYVESSIVLVRANQSDFALATANAEKYNASAILIFEDTYLTSLDNLNQVYPAGPYPSANS 320 LYRGSVANHYYYVGDPLTPGWSAHEETNRISPKDANVLPSIVSIPITFNDGIELLKRLQGHGHLVKDSNWCQDLAPVLSE 400 VWTGSKISSPGLEVNVLQDIEDKQKIINIMAQIDGYESDQILVVGAPRDSWCTGASDSSVGTSLLIDVISTFANMAQDLS 480 WKPRRTIVFASWDARQFNAIGSTEFLEYWKESLEAKAVAYINVDVAVSGDTFTARTVPGLKKVIQRAFDVANEEDEMKAA 560 NIITDDFDYTSDLTSFLTFAGIPVVNLAFERNEENPTPMPFLGSCEDTVSWIDTFGSEYWENAARLGKIWSYLILFLAND 640 PVVPYDLEDEINGVGEMLKRIPEIPGANALDLRKINEEFSELLESLIRFEDEIREWKSLMMHNSYTVSVKKHPELEGYNA 720 KLARFERSFLDEAGLPGHEWYKHLIYGPNLRNSHSQLFPSIFDALLYGDVEAAQKEVKRIALALDRAHNEIRFA 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC354.09c 5 --MTDEK|HV 0.065 . SPBC354.09c 13 VYVPPPK|DP 0.065 . SPBC354.09c 58 PSEDSSR|FP 0.077 . SPBC354.09c 63 SRFPLLR|TK 0.107 . SPBC354.09c 65 FPLLRTK|LA 0.069 . SPBC354.09c 83 CHSFEIR|FA 0.166 . SPBC354.09c 90 FASTFHR|IP 0.107 . SPBC354.09c 121 DGVPAWR|SV 0.217 . SPBC354.09c 136 VLLNYIK|GC 0.065 . SPBC354.09c 144 CDISDTR|QQ 0.071 . SPBC354.09c 172 LQMIMNR|LY 0.089 . SPBC354.09c 177 NRLYYEK|GT 0.072 . SPBC354.09c 184 GTIVDFR|EF 0.112 . SPBC354.09c 247 PLVYANR|GR 0.080 . SPBC354.09c 249 VYANRGR|IE 0.080 . SPBC354.09c 271 SSIVLVR|AN 0.084 . SPBC354.09c 286 ATANAEK|YN 0.067 . SPBC354.09c 323 SANSLYR|GS 0.098 . SPBC354.09c 349 AHEETNR|IS 0.075 . SPBC354.09c 353 TNRISPK|DA 0.107 . SPBC354.09c 376 DGIELLK|RL 0.059 . SPBC354.09c 377 GIELLKR|LQ 0.168 . SPBC354.09c 386 GHGHLVK|DS 0.074 . SPBC354.09c 406 EVWTGSK|IS 0.062 . SPBC354.09c 423 LQDIEDK|QK 0.061 . SPBC354.09c 425 DIEDKQK|II 0.062 . SPBC354.09c 448 LVVGAPR|DS 0.089 . SPBC354.09c 482 AQDLSWK|PR 0.062 . SPBC354.09c 484 DLSWKPR|RT 0.116 . SPBC354.09c 485 LSWKPRR|TI 0.133 . SPBC354.09c 495 FASWDAR|QF 0.154 . SPBC354.09c 510 EFLEYWK|ES 0.053 . SPBC354.09c 516 KESLEAK|AV 0.102 . SPBC354.09c 535 GDTFTAR|TV 0.116 . SPBC354.09c 541 RTVPGLK|KV 0.064 . SPBC354.09c 542 TVPGLKK|VI 0.099 . SPBC354.09c 546 LKKVIQR|AF 0.113 . SPBC354.09c 558 NEEDEMK|AA 0.077 . SPBC354.09c 591 VNLAFER|NE 0.082 . SPBC354.09c 625 YWENAAR|LG 0.067 . SPBC354.09c 628 NAARLGK|IW 0.133 . SPBC354.09c 659 GVGEMLK|RI 0.061 . SPBC354.09c 660 VGEMLKR|IP 0.133 . SPBC354.09c 673 ANALDLR|KI 0.095 . SPBC354.09c 674 NALDLRK|IN 0.066 . SPBC354.09c 688 LLESLIR|FE 0.095 . SPBC354.09c 694 RFEDEIR|EW 0.074 . SPBC354.09c 697 DEIREWK|SL 0.168 . SPBC354.09c 710 SYTVSVK|KH 0.060 . SPBC354.09c 711 YTVSVKK|HP 0.091 . SPBC354.09c 721 LEGYNAK|LA 0.070 . SPBC354.09c 724 YNAKLAR|FE 0.122 . SPBC354.09c 727 KLARFER|SF 0.473 . SPBC354.09c 742 PGHEWYK|HL 0.071 . SPBC354.09c 751 IYGPNLR|NS 0.086 . SPBC354.09c 775 DVEAAQK|EV 0.061 . SPBC354.09c 778 AAQKEVK|RI 0.065 . SPBC354.09c 779 AQKEVKR|IA 0.207 . SPBC354.09c 786 IALALDR|AH 0.080 . SPBC354.09c 792 RAHNEIR|FA 0.147 . ____________________________^_________________

  • Fasta :-

    >SPBC354.09c ATAAAACTAGTTCATTATCCACCACTTTTCATCAGCCACCAAAAGCACATTCTGCTTAAA CGTTTGGCTACAAAGCACGGACACATTGTTTTGCCCTCATTGATACTAAAGTACGTTTCT GATTGAATAGCAGCGAGACTTAGTAGCGTGTAGTCGCTTGACAGCTTTCTTTTTCCCTTC CGATAATTACAACTACTACTTTCTATTTCGAAAGCGTAAAAGTAGTCTTTACATGCTGTA TTTTACTGTTATTCTTTGTTATAACAGGTTTTAGAAAAGAAGTAAAATCTTTTTCTTTTC AGAACGGTTATTCTTTTGGTTTTGAAGTTCCAAAATTTCTTTTGTTTCTAGCGCATTTAA TTATTTTGAAATATTATTGGGCCTGCATATTTGTTCTTCCTTTTCATTTCTATTTGTGTT CATTCTTTTAATTGTTTGCTTTCGTTTTGTCTTTTCCATTTTTTTCTATATACTTATTCG AAAATCTCATTTACGAAATATATCATCCATCACATCTCACATCCTTATCTGATACTTATT TATTACACATTTTCGACAAATTAGAACTTCCCTCTTAATATATCTTGCGCTTATTGTCTA TATGAGCAAAGTCGTCGATTCTTTTGATTTCCTTTAGTTATTATAACCCCCCCTTTTTTG TTGGTTTCTAATAATTCGCATTACTGCGTTTAACACATATATTCTTTCTATACTGACTAA ATGAAATGACTGACGAGAAGCATGTTTACGTTCCTCCTCCAAAGGACCCTCCTAGCTATG AAGAAGTAGCTCTTCATTCTGCTTTAAACAATTCTGCGCCGCCAAACGACGGTGAGCAGA ATGAGACTTCGATGGAAGAAATGGAGATTATCGAACCCCCATCTGAAGACAGTTCAAGGT TTCCGTTGTTGCGTACAAAACTTGCTGCCATTCATGAAGGATGGGAGTCTGCTTGTCATT CTTTTGAGATCAGATTTGCTTCTACCTTTCACCGCATCCCGTTTCAATTTTTATATCTAG CTGTGATTGCAACAGTAATTATTCTTGCTAGTTATTACGGCTACTTTGATGGTGTACCTG CTTGGCGTTCTGTTCATCATTACGGTGAAGATGTTCTTTTAAATTACATCAAGGGATGCG ATATATCAGATACCCGGCAACAAGTAATGACTCTTTCTTCAATCCCTCATTTAGCTGGTA CTGTTGGGGACTCCTCACTTCTTCAGATGATCATGAACAGGTTGTATTATGAAAAAGGAA CTATTGTTGATTTTAGAGAATTTTATGCTTATCTTAACTTCCCTCAATTAGTATCACTTT CGATAGACGGCGATGATTCTTTTCATCCATCTTTGATTGAGTCTTACCAAGTTGGGGGCT ATGACGGGGTATCGATCCCGACTCCGGCAACTTTTGGAGGCAGCCCATCTGGTTTCGTGA ATGCACCTCTTGTGTATGCTAACCGTGGAAGAATTGAGGATTTCGAGTGGCTTGTAAATA GTGGTATTTACGTAGAATCTAGCATCGTACTTGTTCGAGCAAACCAAAGCGATTTTGCAT TGGCGACGGCTAATGCAGAAAAGTACAACGCCTCTGCTATTTTGATTTTCGAAGATACTT ATCTGACGTCTCTCGATAATTTAAATCAGGTGTACCCAGCTGGACCTTATCCATCCGCAA ATTCTCTATATCGAGGAAGCGTCGCTAACCATTATTATTACGTCGGCGATCCGTTAACAC CAGGTTGGTCTGCACATGAAGAAACAAACCGTATTTCTCCAAAAGACGCGAATGTATTGC CTTCTATAGTGAGCATTCCAATCACTTTCAATGACGGTATAGAATTACTCAAGAGACTAC AGGGGCATGGACATTTAGTCAAAGATTCCAACTGGTGTCAAGACCTGGCTCCTGTCTTAT CAGAAGTTTGGACTGGCTCCAAAATAAGCTCTCCCGGTTTAGAAGTTAATGTTTTGCAAG ATATTGAGGATAAGCAAAAAATAATAAACATAATGGCTCAAATTGATGGTTATGAGTCAG ATCAAATTTTGGTAGTAGGAGCTCCACGGGACTCCTGGTGTACGGGTGCCTCTGATTCAT CCGTCGGCACTTCTCTTTTAATTGATGTTATCTCAACGTTTGCAAACATGGCGCAAGATT TATCTTGGAAGCCAAGACGTACTATTGTATTTGCCAGCTGGGATGCAAGGCAGTTCAATG CAATTGGTAGCACAGAATTTTTGGAATACTGGAAAGAAAGTTTAGAAGCTAAAGCGGTTG CGTACATAAATGTGGATGTTGCAGTCAGTGGTGATACTTTTACTGCACGAACCGTTCCTG GCTTAAAAAAGGTTATCCAACGAGCATTTGATGTTGCGAATGAGGAAGACGAGATGAAAG CTGCGAACATCATAACCGATGACTTCGATTACACATCGGACCTTACTTCGTTTTTAACTT TTGCTGGAATCCCGGTAGTTAACTTAGCATTCGAAAGGAATGAAGAAAATCCAACACCCA TGCCATTTCTCGGCTCTTGTGAAGATACTGTTAGTTGGATTGATACTTTTGGTTCTGAAT ATTGGGAGAATGCTGCTAGATTAGGGAAAATATGGAGCTATCTAATATTGTTTTTAGCGA ATGACCCGGTTGTTCCTTACGACCTTGAAGACGAGATAAATGGTGTTGGTGAAATGCTGA AACGTATACCTGAGATACCAGGGGCTAATGCACTTGACTTGCGCAAGATCAATGAAGAAT TCTCTGAGCTTTTAGAATCCTTAATTCGTTTTGAGGATGAAATCAGAGAGTGGAAATCGT TAATGATGCACAATAGCTATACCGTCTCTGTTAAAAAACATCCAGAGCTTGAAGGGTACA ATGCTAAACTTGCCAGATTCGAGAGATCATTCCTTGATGAAGCTGGCCTTCCTGGACATG AATGGTACAAACATTTAATATACGGCCCCAATTTAAGAAATTCACATTCACAGCTATTTC CCTCTATCTTTGATGCTTTACTGTATGGTGACGTTGAAGCTGCTCAAAAAGAAGTAAAAA GGATTGCCTTAGCGTTAGATCGAGCGCACAATGAGATTCGTTTTGCATAAAGGTTTTTTT TTTTGATTCTGGGAAGTTTTCTATAACTCAAATCTTATAAATAAACTATCAAATCGTGTT GAAATCTCAAAGTTTATTATGAATCTCCCTACAACTGTGATATTCCTACTTTATCCATAT TAATTACTCACTCTATTTATTAAAGAAACTGATAGTAACACTATATACTTTTTTCTTTTT TTAACAATAAAAGTTTTTAGATAATT
  • Download Fasta

  • Fasta :-

    MTDEKHVYVPPPKDPPSYEEVALHSALNNSAPPNDGEQNETSMEEMEIIEPPSEDSSRFP LLRTKLAAIHEGWESACHSFEIRFASTFHRIPFQFLYLAVIATVIILASYYGYFDGVPAW RSVHHYGEDVLLNYIKGCDISDTRQQVMTLSSIPHLAGTVGDSSLLQMIMNRLYYEKGTI VDFREFYAYLNFPQLVSLSIDGDDSFHPSLIESYQVGGYDGVSIPTPATFGGSPSGFVNA PLVYANRGRIEDFEWLVNSGIYVESSIVLVRANQSDFALATANAEKYNASAILIFEDTYL TSLDNLNQVYPAGPYPSANSLYRGSVANHYYYVGDPLTPGWSAHEETNRISPKDANVLPS IVSIPITFNDGIELLKRLQGHGHLVKDSNWCQDLAPVLSEVWTGSKISSPGLEVNVLQDI EDKQKIINIMAQIDGYESDQILVVGAPRDSWCTGASDSSVGTSLLIDVISTFANMAQDLS WKPRRTIVFASWDARQFNAIGSTEFLEYWKESLEAKAVAYINVDVAVSGDTFTARTVPGL KKVIQRAFDVANEEDEMKAANIITDDFDYTSDLTSFLTFAGIPVVNLAFERNEENPTPMP FLGSCEDTVSWIDTFGSEYWENAARLGKIWSYLILFLANDPVVPYDLEDEINGVGEMLKR IPEIPGANALDLRKINEEFSELLESLIRFEDEIREWKSLMMHNSYTVSVKKHPELEGYNA KLARFERSFLDEAGLPGHEWYKHLIYGPNLRNSHSQLFPSIFDALLYGDVEAAQKEVKRI ALALDRAHNEIRFA

  • title: PA/protease or protease-like domain interface
  • coordinates: L321,Y322,R323
IDSitePositionGscoreIscore
SPBC354.09cT20.6280.098
IDSitePositionGscoreIscore
SPBC354.09cT20.6280.098
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC354.09c351 STNRISPKDA0.998unspSPBC354.09c351 STNRISPKDA0.998unspSPBC354.09c351 STNRISPKDA0.998unspSPBC354.09c604 SPFLGSCEDT0.993unspSPBC354.09c610 SEDTVSWIDT0.993unspSPBC354.09c17 SKDPPSYEEV0.996unspSPBC354.09c42 SQNETSMEEM0.996unsp

SPBC354.09c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India