SPBC577.07 | ubiquitin C-terminal hydrolase Ubp10 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBC577.07OTHER0.9999860.0000030.000012
No Results

  • Fasta :-

    >SPBC577.07 MSENKDKNNILKRHIEEDNNIDNGKRKKLELGKDMEDVHDIASKEMEEHETTPIISQNLY LDTINRKLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNC STLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDHTPQLSYDLMLKPYVPGFVGM NNIKNNDYFNVVIHMLAHVKPFRNYFLLKNFDNCPQLVQRLAILIRKLWNHKAFKSHVSP QELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFV RIESQKIRQHAEKGEQVVFTGDRVIQTNVVPFLYLTLDLPPKPIFQDEFEGNIIPQVELK EILNKYNGVHTQELAGMRRRFHLMTAPPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFDM SPFIDDSFIQSNPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYV EEISSDMIRLGESFIQLWERSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/171 Sequence name : 171 Sequence length : 502 VALUES OF COMPUTED PARAMETERS Coef20 : 2.920 CoefTot : 0.112 ChDiff : -3 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.741 0.448 0.511 MesoH : -0.351 0.215 -0.310 0.181 MuHd_075 : 42.274 27.596 11.644 8.736 MuHd_095 : 18.244 12.566 4.904 4.864 MuHd_100 : 21.317 11.538 3.997 4.495 MuHd_105 : 22.515 10.393 3.508 4.113 Hmax_075 : -6.533 8.517 -3.031 2.497 Hmax_095 : -17.300 -1.300 -7.365 0.360 Hmax_100 : -17.900 -4.200 -7.545 -0.820 Hmax_105 : -18.638 -6.475 -8.517 -1.067 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9774 0.0226 DFMC : 0.9785 0.0215
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 502 SPBC577.07 MSENKDKNNILKRHIEEDNNIDNGKRKKLELGKDMEDVHDIASKEMEEHETTPIISQNLYLDTINRKLLDFDFEKVCSVS 80 LTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNCSTLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDH 160 TPQLSYDLMLKPYVPGFVGMNNIKNNDYFNVVIHMLAHVKPFRNYFLLKNFDNCPQLVQRLAILIRKLWNHKAFKSHVSP 240 QELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFVRIESQKIRQHAEKGEQVVFT 320 GDRVIQTNVVPFLYLTLDLPPKPIFQDEFEGNIIPQVELKEILNKYNGVHTQELAGMRRRFHLMTAPPYFIFHIKRFMKN 400 NYFTERNQTIVTFPLDDFDMSPFIDDSFIQSNPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYV 480 EEISSDMIRLGESFIQLWERSS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC577.07 5 --MSENK|DK 0.072 . SPBC577.07 7 MSENKDK|NN 0.074 . SPBC577.07 12 DKNNILK|RH 0.065 . SPBC577.07 13 KNNILKR|HI 0.276 . SPBC577.07 25 NNIDNGK|RK 0.059 . SPBC577.07 26 NIDNGKR|KK 0.113 . SPBC577.07 27 IDNGKRK|KL 0.133 . SPBC577.07 28 DNGKRKK|LE 0.082 . SPBC577.07 33 KKLELGK|DM 0.078 . SPBC577.07 44 VHDIASK|EM 0.072 . SPBC577.07 66 YLDTINR|KL 0.070 . SPBC577.07 67 LDTINRK|LL 0.069 . SPBC577.07 75 LDFDFEK|VC 0.066 . SPBC577.07 94 ACLVCGR|YF 0.090 . SPBC577.07 99 GRYFQGR|GP 0.118 . SPBC577.07 124 VNCSTLK|FY 0.059 . SPBC577.07 147 DIAYVMR|PT 0.116 . SPBC577.07 152 MRPTFTK|LE 0.066 . SPBC577.07 157 TKLEVQR|LD 0.088 . SPBC577.07 171 SYDLMLK|PY 0.061 . SPBC577.07 184 VGMNNIK|NN 0.060 . SPBC577.07 200 HMLAHVK|PF 0.060 . SPBC577.07 203 AHVKPFR|NY 0.078 . SPBC577.07 209 RNYFLLK|NF 0.068 . SPBC577.07 220 CPQLVQR|LA 0.100 . SPBC577.07 226 RLAILIR|KL 0.085 . SPBC577.07 227 LAILIRK|LW 0.072 . SPBC577.07 232 RKLWNHK|AF 0.058 . SPBC577.07 235 WNHKAFK|SH 0.076 . SPBC577.07 253 VTVLSHK|KY 0.061 . SPBC577.07 254 TVLSHKK|YS 0.128 . SPBC577.07 261 YSINEQK|DP 0.072 . SPBC577.07 281 HNCLGGK|KS 0.067 . SPBC577.07 282 NCLGGKK|ST 0.122 . SPBC577.07 287 KKSTIAK|PT 0.098 . SPBC577.07 301 SFQGFVR|IE 0.137 . SPBC577.07 306 VRIESQK|IR 0.075 . SPBC577.07 308 IESQKIR|QH 0.140 . SPBC577.07 313 IRQHAEK|GE 0.083 . SPBC577.07 323 VVFTGDR|VI 0.073 . SPBC577.07 342 TLDLPPK|PI 0.076 . SPBC577.07 360 IPQVELK|EI 0.069 . SPBC577.07 365 LKEILNK|YN 0.079 . SPBC577.07 378 QELAGMR|RR 0.072 . SPBC577.07 379 ELAGMRR|RF 0.104 . SPBC577.07 380 LAGMRRR|FH 0.116 . SPBC577.07 395 YFIFHIK|RF 0.062 . SPBC577.07 396 FIFHIKR|FM 0.213 . SPBC577.07 399 HIKRFMK|NN 0.140 . SPBC577.07 406 NNYFTER|NQ 0.089 . SPBC577.07 434 FIQSNPK|IS 0.060 . SPBC577.07 438 NPKISTK|YN 0.070 . SPBC577.07 461 EEFHNFR|IQ 0.077 . SPBC577.07 465 NFRIQIR|NP 0.091 . SPBC577.07 471 RNPSTNK|WY 0.061 . SPBC577.07 489 ISSDMIR|LG 0.094 . SPBC577.07 500 FIQLWER|SS 0.128 . ____________________________^_________________

  • Fasta :-

    >SPBC577.07 GATACTTCCATACGACTTAGTAACTGAAGTTATCGATAGATGGTAAAGCTTCAAAAATGT CAGAAAATAAGGATAAAAATAATATTTTAAAACGCCATATTGAAGAAGATAATAATATTG ATAATGGAAAACGCAAAAAACTCGAATTGGGTAAAGACATGGAAGATGTTCATGATATTG CGTCTAAAGAGATGGAAGAACACGAAACAACTCCAATAATATCACAAAACCTATATTTGG ACACTATCAATCGTAAATTGTTAGATTTTGATTTTGAAAAGGTTTGCTCCGTTTCCTTGA CAAATCTTAGTGTATATGCTTGCTTAGTCTGTGGAAGATATTTCCAGGGTCGTGGACCTT CATCACATGCTTATTTCCATGCACTCACCGAAAATCATCATGTTTTTGTAAATTGCTCAA CATTAAAGTTTTATGTCTTGCCGGAATCTTATCAAGTAGAATCCAGCGCTTTACAAGATA TTGCCTATGTGATGCGACCTACTTTTACGAAACTAGAAGTCCAAAGACTAGATCACACAC CACAGCTCAGTTACGATTTAATGCTCAAACCCTATGTTCCAGGTTTTGTTGGCATGAACA ATATAAAAAATAACGATTACTTTAATGTGGTGATTCATATGTTGGCCCATGTTAAGCCAT TTCGAAATTATTTTTTGCTTAAAAACTTTGATAATTGCCCTCAACTTGTCCAAAGATTGG CAATCCTTATTCGTAAACTTTGGAACCATAAAGCATTCAAGAGCCATGTCTCTCCTCAAG AACTCATTCAGGAGGTTACAGTTCTTTCTCACAAAAAATATTCTATTAATGAACAAAAAG ATCCAGTAGAATTCCTTTCCTGGTTTTTAAATACTTTACACAATTGCCTTGGTGGAAAAA AGTCGACCATAGCAAAACCTACTTCTATTGTACATTACAGCTTTCAAGGATTTGTACGTA TTGAATCACAGAAAATTCGCCAACATGCTGAAAAGGGAGAGCAAGTTGTGTTTACTGGTG ATAGGGTTATACAAACTAACGTCGTCCCTTTTCTTTACCTTACTCTTGATTTACCTCCGA AACCCATATTCCAAGATGAGTTTGAAGGTAATATCATCCCACAAGTAGAATTAAAAGAGA TACTTAACAAATATAATGGGGTACATACCCAAGAACTTGCAGGTATGCGACGGCGTTTTC ATTTAATGACGGCTCCTCCATACTTTATATTTCACATCAAAAGATTTATGAAAAACAATT ACTTTACGGAAAGAAACCAAACTATAGTGACATTTCCTTTGGATGATTTTGATATGAGCC CATTTATTGATGACTCATTTATCCAGTCAAATCCGAAAATCTCTACGAAATACAACCTCG TTGCTAATATTATACATGAGTCCGTGACACATGCTGAAGAAGAATTTCATAACTTCCGAA TTCAAATTCGAAACCCCTCTACCAATAAATGGTATCAAATTCAAGACTTATATGTTGAAG AAATCAGTAGCGATATGATTCGTTTAGGCGAAAGTTTTATTCAGCTTTGGGAAAGGTCAT CATAGTGTTAATATGTGGAATTTTTGGATTTCTCACAAAATTTCCTCTACGTGAGACAAA ATTAAAAAACATTCATTTTATTTATCAAACGTTACCGCTTAGAAAATCTTTATTCTATAT AAATTAGATTATCCATTTATATTCCCA
  • Download Fasta

  • Fasta :-

    MSENKDKNNILKRHIEEDNNIDNGKRKKLELGKDMEDVHDIASKEMEEHETTPIISQNLY LDTINRKLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNC STLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDHTPQLSYDLMLKPYVPGFVGM NNIKNNDYFNVVIHMLAHVKPFRNYFLLKNFDNCPQLVQRLAILIRKLWNHKAFKSHVSP QELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFV RIESQKIRQHAEKGEQVVFTGDRVIQTNVVPFLYLTLDLPPKPIFQDEFEGNIIPQVELK EILNKYNGVHTQELAGMRRRFHLMTAPPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFDM SPFIDDSFIQSNPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYV EEISSDMIRLGESFIQLWERSS

  • title: Active Site
  • coordinates: N182,D187,N459,D477
No Results
No Results
IDSitePeptideScoreMethod
SPBC577.07256 SHKKYSINEQ0.99unsp

SPBC577.07      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India