SPBC6B1.06c | ubiquitin C-terminal hydrolase Ubp14

_IDPredictionOTHERSPmTPCS_Position
SPBC6B1.06cOTHER0.9999810.0000190.000000
No Results

  • Fasta :-

    >SPBC6B1.06c MSCPHLTETNVVIPDNSQVIYREECVRCFNSQDEEGGIDLCLTCFQSGCGETGLKHSLVH FEQTLHPIVVTIARQPKQKINDEPPQKITKLEIREDSDEDLYDYFYVPKCLVCNIILDIQ DPLLSLSLEAMKNATKASNKSQLTAWENELTTCDHIINLPENETYVTNLDNATCSKCDLA ENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDTGHPLAVKLKSISPDGQADIYCYSCD EERIDPNIKTHMLNFGIDIAKLNKTEKSLAELQLEQNLNWDFGASEEDDASKRLFGPGLT GLKNLGNSCYLASTMQSLFSIKEFAIHELNLFNTYNSVCQTPTTDLQCQLGKLADGLVSG KFSKPSKIGLLNNPSSSILPYQDGLRPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLLGKI RKSSIAKTDITKIFDFETEQKLSCLSCKRVRYSSFSSQGLTLTVPRVKIGEIEGEQIYEE VSIDQCLDATIQPDQMEYTCEACKSKLGATTTTAMKSFPKVLILQANRFDLQGYQVKKLS IPIIVNEDGIYNFDRLMAKDHPNDEDYLPEKTETIEWNQSAIEQLQAMGFPLVRCQRALL ATGNSDTETAMNWLFEHMEDPEIDKPIEVSELLPKADSSVSEENVQSLCEFGFTVAQARK GLLESNNNIERAVDWILNHPDESFEEPPLEGSDSSIKNENMGSWESTNVPVNYNLKAIIS HKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAKTTGYVYLFERLD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/908 Sequence name : 908 Sequence length : 775 VALUES OF COMPUTED PARAMETERS Coef20 : 3.588 CoefTot : -0.258 ChDiff : -44 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.012 1.488 0.200 0.464 MesoH : -0.336 0.111 -0.351 0.177 MuHd_075 : 13.429 14.048 6.130 2.333 MuHd_095 : 14.709 3.705 3.445 1.427 MuHd_100 : 17.412 8.005 6.095 1.695 MuHd_105 : 18.438 10.743 7.453 1.998 Hmax_075 : 7.875 7.262 0.939 2.406 Hmax_095 : 3.412 1.600 -0.955 1.356 Hmax_100 : 5.500 5.000 1.091 2.190 Hmax_105 : 6.417 8.750 1.412 3.022 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9961 0.0039 DFMC : 0.9897 0.0103
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 775 SPBC6B1.06c MSCPHLTETNVVIPDNSQVIYREECVRCFNSQDEEGGIDLCLTCFQSGCGETGLKHSLVHFEQTLHPIVVTIARQPKQKI 80 NDEPPQKITKLEIREDSDEDLYDYFYVPKCLVCNIILDIQDPLLSLSLEAMKNATKASNKSQLTAWENELTTCDHIINLP 160 ENETYVTNLDNATCSKCDLAENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDTGHPLAVKLKSISPDGQADIYCYSCD 240 EERIDPNIKTHMLNFGIDIAKLNKTEKSLAELQLEQNLNWDFGASEEDDASKRLFGPGLTGLKNLGNSCYLASTMQSLFS 320 IKEFAIHELNLFNTYNSVCQTPTTDLQCQLGKLADGLVSGKFSKPSKIGLLNNPSSSILPYQDGLRPFMFKDVVGQGHSE 400 FGTSQQQDAYEFLLYLLGKIRKSSIAKTDITKIFDFETEQKLSCLSCKRVRYSSFSSQGLTLTVPRVKIGEIEGEQIYEE 480 VSIDQCLDATIQPDQMEYTCEACKSKLGATTTTAMKSFPKVLILQANRFDLQGYQVKKLSIPIIVNEDGIYNFDRLMAKD 560 HPNDEDYLPEKTETIEWNQSAIEQLQAMGFPLVRCQRALLATGNSDTETAMNWLFEHMEDPEIDKPIEVSELLPKADSSV 640 SEENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILNHPDESFEEPPLEGSDSSIKNENMGSWESTNVPVNYNLKAIIS 720 HKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAKTTGYVYLFERLD 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ....................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC6B1.06c 22 NSQVIYR|EE 0.087 . SPBC6B1.06c 27 YREECVR|CF 0.086 . SPBC6B1.06c 55 CGETGLK|HS 0.057 . SPBC6B1.06c 74 IVVTIAR|QP 0.099 . SPBC6B1.06c 77 TIARQPK|QK 0.175 . SPBC6B1.06c 79 ARQPKQK|IN 0.075 . SPBC6B1.06c 87 NDEPPQK|IT 0.060 . SPBC6B1.06c 90 PPQKITK|LE 0.062 . SPBC6B1.06c 94 ITKLEIR|ED 0.087 . SPBC6B1.06c 109 DYFYVPK|CL 0.060 . SPBC6B1.06c 132 LSLEAMK|NA 0.063 . SPBC6B1.06c 136 AMKNATK|AS 0.065 . SPBC6B1.06c 140 ATKASNK|SQ 0.082 . SPBC6B1.06c 176 DNATCSK|CD 0.062 . SPBC6B1.06c 196 GALSCGR|KQ 0.081 . SPBC6B1.06c 197 ALSCGRK|QY 0.140 . SPBC6B1.06c 222 GHPLAVK|LK 0.061 . SPBC6B1.06c 224 PLAVKLK|SI 0.121 . SPBC6B1.06c 243 YSCDEER|ID 0.076 . SPBC6B1.06c 249 RIDPNIK|TH 0.053 . SPBC6B1.06c 261 FGIDIAK|LN 0.060 . SPBC6B1.06c 264 DIAKLNK|TE 0.053 . SPBC6B1.06c 267 KLNKTEK|SL 0.091 . SPBC6B1.06c 292 EEDDASK|RL 0.059 . SPBC6B1.06c 293 EDDASKR|LF 0.254 . SPBC6B1.06c 303 PGLTGLK|NL 0.054 . SPBC6B1.06c 322 QSLFSIK|EF 0.063 . SPBC6B1.06c 352 LQCQLGK|LA 0.070 . SPBC6B1.06c 361 DGLVSGK|FS 0.064 . SPBC6B1.06c 364 VSGKFSK|PS 0.072 . SPBC6B1.06c 367 KFSKPSK|IG 0.062 . SPBC6B1.06c 386 PYQDGLR|PF 0.068 . SPBC6B1.06c 391 LRPFMFK|DV 0.138 . SPBC6B1.06c 419 LLYLLGK|IR 0.061 . SPBC6B1.06c 421 YLLGKIR|KS 0.088 . SPBC6B1.06c 422 LLGKIRK|SS 0.147 . SPBC6B1.06c 427 RKSSIAK|TD 0.088 . SPBC6B1.06c 432 AKTDITK|IF 0.061 . SPBC6B1.06c 441 DFETEQK|LS 0.053 . SPBC6B1.06c 448 LSCLSCK|RV 0.077 . SPBC6B1.06c 449 SCLSCKR|VR 0.108 . SPBC6B1.06c 451 LSCKRVR|YS 0.104 . SPBC6B1.06c 466 LTLTVPR|VK 0.086 . SPBC6B1.06c 468 LTVPRVK|IG 0.067 . SPBC6B1.06c 504 YTCEACK|SK 0.073 . SPBC6B1.06c 506 CEACKSK|LG 0.062 . SPBC6B1.06c 516 TTTTAMK|SF 0.073 . SPBC6B1.06c 520 AMKSFPK|VL 0.062 . SPBC6B1.06c 528 LILQANR|FD 0.081 . SPBC6B1.06c 537 LQGYQVK|KL 0.066 . SPBC6B1.06c 538 QGYQVKK|LS 0.107 . SPBC6B1.06c 555 GIYNFDR|LM 0.089 . SPBC6B1.06c 559 FDRLMAK|DH 0.070 . SPBC6B1.06c 571 EDYLPEK|TE 0.060 . SPBC6B1.06c 594 MGFPLVR|CQ 0.086 . SPBC6B1.06c 597 PLVRCQR|AL 0.212 . SPBC6B1.06c 625 EDPEIDK|PI 0.066 . SPBC6B1.06c 635 VSELLPK|AD 0.062 . SPBC6B1.06c 659 FTVAQAR|KG 0.068 . SPBC6B1.06c 660 TVAQARK|GL 0.089 . SPBC6B1.06c 671 SNNNIER|AV 0.206 . SPBC6B1.06c 697 GSDSSIK|NE 0.057 . SPBC6B1.06c 716 PVNYNLK|AI 0.066 . SPBC6B1.06c 722 KAIISHK|GS 0.080 . SPBC6B1.06c 736 HYVAFIR|KE 0.102 . SPBC6B1.06c 737 YVAFIRK|EI 0.111 . SPBC6B1.06c 742 RKEIDGK|QQ 0.067 . SPBC6B1.06c 752 VLFNDEK|VL 0.059 . SPBC6B1.06c 763 ASLEEAK|TT 0.070 . SPBC6B1.06c 773 YVYLFER|LD 0.075 . ____________________________^_________________

  • Fasta :-

    >SPBC6B1.06c GTTAATCAACAAGATGCACGTATATTATTAACTAATGTTAATATTCTGCCTACCTCATGT CCATCCATCCATAAACACCTATAGCAACCCATGTCGTGTCCGCACCTCACAGAGACAAAC GTTGTAATCCCAGATAATTCTCAGGTAATATATCGTGAAGAATGCGTCCGTTGCTTTAAT TCGCAGGATGAAGAAGGTGGAATTGATTTATGCTTAACCTGTTTTCAATCTGGATGTGGG GAAACTGGGTTAAAACACTCACTTGTCCATTTTGAACAAACTTTGCACCCAATTGTGGTC ACCATTGCCAGGCAACCTAAGCAAAAAATTAATGATGAGCCTCCCCAAAAAATTACGAAA CTTGAGATCAGAGAAGATAGTGATGAAGATTTATATGATTATTTTTATGTCCCTAAGTGT TTGGTCTGTAATATAATATTAGATATACAGGATCCCTTACTTTCGTTATCATTAGAGGCA ATGAAAAATGCTACCAAGGCATCAAACAAAAGTCAATTAACTGCATGGGAAAATGAATTA ACTACTTGTGATCATATAATAAATTTACCAGAAAATGAAACTTACGTCACAAATTTGGAC AATGCTACATGTTCAAAATGTGATCTTGCAGAAAATCTATGGATGTGTTTAACATGTGGC GCATTAAGCTGTGGAAGAAAACAGTACGGAGGAGGTGGTGGGAATGGGCACGCCCTTTCT CATTATGATGATACAGGACATCCGCTTGCAGTTAAACTCAAAAGCATTTCACCTGATGGT CAGGCTGATATATATTGTTATAGTTGCGATGAGGAAAGAATTGACCCAAATATAAAGACA CATATGCTAAATTTCGGCATCGATATCGCCAAGTTGAACAAAACTGAAAAATCTTTGGCT GAACTACAATTAGAGCAAAATTTAAATTGGGATTTTGGTGCCTCCGAAGAGGATGACGCT TCAAAAAGATTGTTTGGACCAGGATTAACTGGTCTTAAAAATCTTGGTAATAGCTGTTAT CTGGCCTCAACTATGCAGTCGTTGTTTTCTATTAAGGAATTTGCTATTCACGAATTAAAC CTTTTCAACACTTATAATTCTGTTTGTCAAACCCCCACTACAGATTTGCAATGTCAACTT GGTAAACTAGCTGATGGTTTAGTAAGTGGGAAATTTTCTAAACCTAGCAAAATTGGTTTA CTCAATAATCCTTCTTCATCGATTCTTCCTTACCAAGATGGTTTGAGGCCTTTTATGTTC AAAGATGTTGTGGGACAAGGGCATTCTGAATTTGGAACTTCTCAACAGCAAGATGCTTAT GAGTTTTTATTGTATTTGCTGGGGAAAATACGGAAATCTAGTATTGCGAAAACTGACATT ACTAAGATTTTTGACTTTGAAACGGAGCAAAAATTATCTTGTCTTTCCTGTAAACGCGTT CGCTATTCTTCTTTCTCTTCTCAGGGATTGACTTTGACAGTTCCGCGTGTTAAAATTGGT GAAATTGAGGGTGAGCAAATTTATGAAGAAGTCTCAATAGACCAATGTTTAGATGCAACT ATACAACCAGACCAAATGGAGTATACTTGTGAAGCTTGTAAAAGTAAACTAGGAGCTACA ACTACTACTGCCATGAAGTCGTTCCCGAAAGTCTTGATCCTACAAGCCAACCGGTTTGAT TTACAGGGATATCAAGTTAAGAAATTAAGCATCCCTATAATAGTTAATGAAGACGGAATT TATAATTTCGATCGCTTAATGGCTAAGGACCACCCAAATGACGAAGATTATCTTCCTGAA AAGACAGAGACCATTGAATGGAACCAAAGTGCTATTGAACAGCTTCAAGCTATGGGATTT CCTTTAGTCAGATGCCAACGAGCATTACTCGCTACTGGAAATTCTGATACTGAAACTGCC ATGAACTGGCTATTTGAACATATGGAGGACCCTGAAATTGACAAACCTATTGAAGTTTCT GAATTACTGCCCAAAGCAGACTCAAGTGTTTCAGAAGAAAATGTTCAATCATTATGTGAA TTCGGCTTTACTGTTGCACAAGCACGAAAAGGATTGCTTGAATCTAACAATAATATTGAG CGCGCAGTTGATTGGATTTTAAATCATCCGGATGAAAGTTTTGAAGAACCACCACTTGAA GGATCAGATTCTTCAATAAAAAATGAAAATATGGGTAGTTGGGAATCGACAAACGTTCCA GTCAACTACAATTTAAAGGCCATAATAAGCCATAAGGGCTCAAGTGCGCATGCCGGTCAT TATGTAGCATTTATACGCAAAGAGATAGATGGAAAGCAGCAATGGGTTTTGTTTAATGAT GAAAAGGTGCTTCAAGTTGCCTCCTTGGAAGAAGCAAAAACTACCGGATATGTCTATCTT TTTGAAAGGCTAGATTGACATTAATTTATATCATTTTTTTTTTTTTAATAGCAATCATCG GAGCGTCTTATTGAATTTTGGGTTGAGCAGAATTTGGTAGCATACAACAACTAAATTTTT TTAACATTACATTATCAAAGAGACCCGGATTTAAGTCTTTCTTTACAAAATAGACCAACC ATTCAGTTTGGCTTTAAAAACTCCTTTGACGCAAAAGTCGTTTTACAGTCATCACTCCCC GAATATTTGAAATAAATAAAAAATATCCTTAATAGCATTTTGAGTTACCTTCTGTGAACG AA
  • Download Fasta

  • Fasta :-

    MSCPHLTETNVVIPDNSQVIYREECVRCFNSQDEEGGIDLCLTCFQSGCGETGLKHSLVH FEQTLHPIVVTIARQPKQKINDEPPQKITKLEIREDSDEDLYDYFYVPKCLVCNIILDIQ DPLLSLSLEAMKNATKASNKSQLTAWENELTTCDHIINLPENETYVTNLDNATCSKCDLA ENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDTGHPLAVKLKSISPDGQADIYCYSCD EERIDPNIKTHMLNFGIDIAKLNKTEKSLAELQLEQNLNWDFGASEEDDASKRLFGPGLT GLKNLGNSCYLASTMQSLFSIKEFAIHELNLFNTYNSVCQTPTTDLQCQLGKLADGLVSG KFSKPSKIGLLNNPSSSILPYQDGLRPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLLGKI RKSSIAKTDITKIFDFETEQKLSCLSCKRVRYSSFSSQGLTLTVPRVKIGEIEGEQIYEE VSIDQCLDATIQPDQMEYTCEACKSKLGATTTTAMKSFPKVLILQANRFDLQGYQVKKLS IPIIVNEDGIYNFDRLMAKDHPNDEDYLPEKTETIEWNQSAIEQLQAMGFPLVRCQRALL ATGNSDTETAMNWLFEHMEDPEIDKPIEVSELLPKADSSVSEENVQSLCEFGFTVAQARK GLLESNNNIERAVDWILNHPDESFEEPPLEGSDSSIKNENMGSWESTNVPVNYNLKAIIS HKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAKTTGYVYLFERLD

  • title: Active Site
  • coordinates: N304,C309,H730,D750
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBC6B1.06c320 SQSLFSIKEF0.996unspSPBC6B1.06c320 SQSLFSIKEF0.996unspSPBC6B1.06c320 SQSLFSIKEF0.996unspSPBC6B1.06c424 SIRKSSIAKT0.992unspSPBC6B1.06c454 SVRYSSFSSQ0.992unspSPBC6B1.06c683 SHPDESFEEP0.994unspSPBC6B1.06c97 SIREDSDEDL0.998unspSPBC6B1.06c285 SDFGASEEDD0.99unsp

SPBC6B1.06c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India