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  • Fasta :-

    >SPBC887.22 MNYLEGTIDFAGQLRCQKYMNYGLCTSAVISYIYGYLVQDSYCVIKLFLILASLVALVCL PAWSMYNKNPLKFQKKKE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/657 Sequence name : 657 Sequence length : 78 VALUES OF COMPUTED PARAMETERS Coef20 : 3.501 CoefTot : -0.169 ChDiff : 4 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.229 2.859 0.510 0.841 MesoH : -0.665 -0.065 -0.825 -0.379 MuHd_075 : 15.188 5.462 4.617 0.562 MuHd_095 : 13.844 14.883 6.733 2.279 MuHd_100 : 13.614 13.788 3.028 2.188 MuHd_105 : 26.004 15.157 4.796 4.224 Hmax_075 : 1.138 1.400 -1.186 0.750 Hmax_095 : 1.600 9.600 1.214 2.270 Hmax_100 : 2.600 6.300 -1.495 2.730 Hmax_105 : 7.300 11.200 -0.343 3.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9975 0.0025 DFMC : 0.9975 0.0025
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 78 SPBC887.22 MNYLEGTIDFAGQLRCQKYMNYGLCTSAVISYIYGYLVQDSYCVIKLFLILASLVALVCLPAWSMYNKNPLKFQKKKE 80 .............................................................................. 80 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC887.22 15 DFAGQLR|CQ 0.073 . SPBC887.22 18 GQLRCQK|YM 0.134 . SPBC887.22 46 DSYCVIK|LF 0.057 . SPBC887.22 68 AWSMYNK|NP 0.064 . SPBC887.22 72 YNKNPLK|FQ 0.070 . SPBC887.22 75 NPLKFQK|KK 0.074 . SPBC887.22 76 PLKFQKK|KE 0.093 . SPBC887.22 77 LKFQKKK|E- 0.129 . ____________________________^_________________
  • Fasta :-

    >SPBC887.22 ATGAACTATCTTGAAGGTACGATCGATTTTGCAGGACAATTAAGGTGTCAAAAGTATATG AACTATGGTCTATGTACAAGTGCTGTTATTTCGTACATTTATGGGTATTTAGTTCAAGAT TCTTATTGTGTGATTAAATTGTTTTTAATTTTAGCATCGTTGGTGGCTCTTGTGTGTCTT CCTGCTTGGTCTATGTACAACAAAAACCCTTTAAAATTTCAAAAGAAAAAGGAGTAAGCG GGAAATGGGGAATCTTTCTTTACTTGAATCGCAATCTCGCGAAATTAAAGAACCAAAATA CCAAACAAAAGTTGCTCCGGCTTTATAGAATACAAATAATCTTTCATTCCAAAAGTAATG CTAAACATGTTTTAACAACTTTTGTCCGAAAACCTTTTTTTAAACGCACATTTTTTGCAT ATCCACAATACACGATCGATAGATGGATTTTTCCGTGATGGTTCCTCAAATCTTATTGAA CATGACTTTCCTGGTACCAATAAAGAGTTACATCCTTTACATATGGTGCGCTTTATATCT GGGTGTATTCGCATTACTGATTTTTGTGAAACATCCTTGGCTGTAGAGATATAGTGTCTC GACAATGTAGGTTCTTGAACGTTTCTAAAAAGTAATTGCGAAGCCTGGTATAAATATGAT ACCCTTGCATGTTGGTCCTTTGACTTTGTACTCATCTCGACCGTTTATGTTTAAAACACT TGAGCTATTAAAGGAATTGCAAAACAGAGAACAAACAACTTTCCGTTTTTATAATGGAAT GCAAAAGTCAAAAAAATTATTTTTAACTTAACAATTTAATTATGTTTCTTATAAAAATCC TTCATTAAATTAATTAATAAATAGTTAATGCTTGTTGCAGTCTGATTTTACCATAGGTCA AATTTTTAATTTGTTTTTCCACGG
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India