SPBC947.09 | ThiJ domain protein

_IDPredictionOTHERSPmTPCS_Position
SPBC947.09OTHER0.9998770.0000840.000039
No Results

  • Fasta :-

    >SPBC947.09 MPAKTRNVLIACSDYYGPFYKDGENTGAFFLELLHPYLVFRDACFNVDIVTESGKIQFDD HSVAGPAIDKGSKGEEFLSYDDHIASGPELSKAEKYVLENKDDMFWRIVQNSKTADEVNP DKYDIFFVAGGHATLFDFPKATNLQKLGTSIYENGGVVAAVCHGPTLLPFMKRQTSDGSV SIVCGKDVTAFDRVAEDKSKLMEALKKYNLEVLDDMLNDAGANFIKSPNPFGDFVIADGR LVTGSNPASATSTAKTALRVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/697 Sequence name : 697 Sequence length : 261 VALUES OF COMPUTED PARAMETERS Coef20 : 3.631 CoefTot : 0.151 ChDiff : -10 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.559 1.335 0.213 0.594 MesoH : -0.408 0.270 -0.335 0.215 MuHd_075 : 7.203 2.607 2.583 1.000 MuHd_095 : 20.812 10.349 5.730 2.572 MuHd_100 : 20.810 9.464 6.220 2.582 MuHd_105 : 17.969 7.480 6.143 2.368 Hmax_075 : 2.800 5.483 0.396 2.858 Hmax_095 : 11.287 8.050 2.501 3.185 Hmax_100 : 11.100 9.100 2.431 3.600 Hmax_105 : 11.100 8.800 2.366 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9579 0.0421 DFMC : 0.8949 0.1051
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 261 SPBC947.09 MPAKTRNVLIACSDYYGPFYKDGENTGAFFLELLHPYLVFRDACFNVDIVTESGKIQFDDHSVAGPAIDKGSKGEEFLSY 80 DDHIASGPELSKAEKYVLENKDDMFWRIVQNSKTADEVNPDKYDIFFVAGGHATLFDFPKATNLQKLGTSIYENGGVVAA 160 VCHGPTLLPFMKRQTSDGSVSIVCGKDVTAFDRVAEDKSKLMEALKKYNLEVLDDMLNDAGANFIKSPNPFGDFVIADGR 240 LVTGSNPASATSTAKTALRVL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBC947.09 4 ---MPAK|TR 0.061 . SPBC947.09 6 -MPAKTR|NV 0.101 . SPBC947.09 21 YYGPFYK|DG 0.074 . SPBC947.09 41 HPYLVFR|DA 0.162 . SPBC947.09 55 IVTESGK|IQ 0.059 . SPBC947.09 70 AGPAIDK|GS 0.062 . SPBC947.09 73 AIDKGSK|GE 0.054 . SPBC947.09 92 SGPELSK|AE 0.059 . SPBC947.09 95 ELSKAEK|YV 0.088 . SPBC947.09 101 KYVLENK|DD 0.059 . SPBC947.09 107 KDDMFWR|IV 0.151 . SPBC947.09 113 RIVQNSK|TA 0.075 . SPBC947.09 122 DEVNPDK|YD 0.060 . SPBC947.09 140 TLFDFPK|AT 0.073 . SPBC947.09 146 KATNLQK|LG 0.058 . SPBC947.09 172 TLLPFMK|RQ 0.060 . SPBC947.09 173 LLPFMKR|QT 0.280 . SPBC947.09 186 VSIVCGK|DV 0.093 . SPBC947.09 193 DVTAFDR|VA 0.094 . SPBC947.09 198 DRVAEDK|SK 0.072 . SPBC947.09 200 VAEDKSK|LM 0.062 . SPBC947.09 206 KLMEALK|KY 0.057 . SPBC947.09 207 LMEALKK|YN 0.140 . SPBC947.09 226 AGANFIK|SP 0.087 . SPBC947.09 240 FVIADGR|LV 0.101 . SPBC947.09 255 SATSTAK|TA 0.072 . SPBC947.09 259 TAKTALR|VL 0.089 . ____________________________^_________________

  • Fasta :-

    >SPBC947.09 CATATACAGCAGTGGTTTATAGTATATTGTGGTTTTCGTTACAACTCACCATCCTTTTAT TAAAAATTTAGCAGGAAGTGGTAGTTAGTTCATTTTTTTGATTTTTAGAAAAATTCATGT CGAATACACATTTGTTAAAGAAAGTTAACGAATTATTGATTCAGCCGGTGAACCAGAAAT TACCCGACATCTCTTTTTCTTTCGTTGTGTGATTATAACAGTGCTTCAGACATATTTTGT TCGTCTATTATTCGACTTTTAGAATGTAAACATGTGAATACGCAAACCTGCTATTGTACG AGGAATTTATTTGCTCAGTGTACGAGACCCTGGCCTTTTTCATCACTAATACTTGGCTAC GCATTGCTCCTGCTGTCATACGGAATTTCGAACAAACCAGATGCAAAATGCATTTCGTAG CCACATTACAAGTTTAGGGGTGAATTAGCAAAAAATAAGTCGTTAGCTATATGAACTTGC TGCATCTAGAATACCAATAGGCAATGAAAAGAGCTATGCCGTCTAAGGAGAAAATTTCTG TAACTGACATGGAAATAATTAATCAGTGGACGTTGCACTTTACTTAATGTTTACGTAAAA AACCGATAAACGAAAATTTATCGAAGAAATACTAATATTTAGAGTCCAAAAAAAAGACAT AAAAGGATGGTCTTCACCGAAAATCCAAACAATTTCATCGAACTCTTTCTGTCTTCAAGG AGTTATACATTGTAAAGCACTATACAAACTATTTTTAACTCAAAAATGCCTGCTAAAACT AGAAATGTCTTAATTGCTTGCTCTGATTATTATGGACCATTTTATAAAGATGGTGAGAAT ACTGGAGCATTTTTTTTAGAATTGTTACATCCTTATTTGGTATTTAGAGATGCTTGTTTC AATGTTGACATTGTTACTGAATCAGGGAAAATCCAATTCGATGATCATTCAGTAGCAGGT CCGGCAATTGACAAGGGATCTAAGGGTGAAGAGTTTTTGAGCTATGATGATCACATCGCA AGTGGCCCTGAGCTATCCAAAGCTGAAAAATATGTTTTGGAAAATAAGGATGATATGTTT TGGAGGATTGTGCAAAATTCCAAAACCGCCGACGAAGTGAATCCTGACAAGTATGACATT TTCTTCGTAGCAGGAGGACATGCCACTCTATTTGATTTTCCAAAAGCTACAAATTTGCAA AAACTTGGTACTTCCATTTATGAAAATGGGGGAGTAGTAGCTGCCGTGTGCCATGGTCCT ACATTACTTCCATTCATGAAGCGTCAAACGTCCGACGGCTCTGTTTCAATTGTCTGTGGT AAAGATGTTACCGCCTTCGATAGGGTGGCCGAGGATAAATCCAAACTTATGGAAGCGCTG AAAAAATACAACTTGGAGGTTTTGGACGATATGTTGAATGATGCAGGAGCCAACTTTATC AAGTCACCAAACCCATTCGGTGATTTTGTAATAGCAGATGGAAGATTAGTTACTGGTTCC AATCCTGCAAGTGCTACATCTACGGCGAAAACGGCTTTGCGTGTTTTGTAAAGCGAAACG ATAATAAAGCTATTGGATAATGAGTCTTTTTAAACGATTAATTTGAACGTATGATGAAAT TTATGTATACAGGAAAAATTAATGATGCGAACATAATTTGACGCCGATGAATAATAACAC TCAAAATCATTGATGATATTTAAAGTGGATTACATACACTAGAAATGAATAAGATTGAAT ATATACTATAAAAAAAA
  • Download Fasta

  • Fasta :-

    MPAKTRNVLIACSDYYGPFYKDGENTGAFFLELLHPYLVFRDACFNVDIVTESGKIQFDD HSVAGPAIDKGSKGEEFLSYDDHIASGPELSKAEKYVLENKDDMFWRIVQNSKTADEVNP DKYDIFFVAGGHATLFDFPKATNLQKLGTSIYENGGVVAAVCHGPTLLPFMKRQTSDGSV SIVCGKDVTAFDRVAEDKSKLMEALKKYNLEVLDDMLNDAGANFIKSPNPFGDFVIADGR LVTGSNPASATSTAKTALRVL

  • title: conserved cys residue
  • coordinates: C162
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPBC947.09T2560.6060.022SPBC947.09T2530.5310.065SPBC947.09T2510.5110.302
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPBC947.09T2560.6060.022SPBC947.09T2530.5310.065SPBC947.09T2510.5110.302
No Results

SPBC947.09      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India