SPBP23A10.15c | mitochondrial processing peptidase (MPP) complex beta subunit Mas1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPBP23A10.15cmTP0.0123260.0000440.987630CS pos: 14-15. RRF-AT. Pr: 0.8188
No Results

  • Fasta :-

    >SPBP23A10.15c MLRLQNLPKLVRRFATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAK NNGAAHFLEHLAFKGTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVA VLADILTNSSISASAVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPK ENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAP RGLKPRFVGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPH LSSRLSTIVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTVA TRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVAR VASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/334 Sequence name : 334 Sequence length : 457 VALUES OF COMPUTED PARAMETERS Coef20 : 4.667 CoefTot : 0.276 ChDiff : -5 ZoneTo : 22 KR : 5 DE : 0 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.947 1.253 0.050 0.436 MesoH : -0.067 0.171 -0.346 0.220 MuHd_075 : 30.669 13.626 5.740 7.099 MuHd_095 : 44.219 33.821 13.172 11.143 MuHd_100 : 37.309 29.765 10.682 9.788 MuHd_105 : 43.318 27.127 11.177 10.339 Hmax_075 : 3.033 5.600 -2.398 2.770 Hmax_095 : 17.900 22.000 3.551 6.840 Hmax_100 : 14.900 17.600 2.673 5.860 Hmax_105 : 18.100 19.500 3.201 6.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0131 0.9869 DFMC : 0.0699 0.9301 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.1364 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 457 SPBP23A10.15c MLRLQNLPKLVRRFATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRS 80 QKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERERQVILREQEEVDKMADEVVFD 160 HLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAP 240 RGLKPRFVGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSFMS 320 FSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTVATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRR 400 MSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPBP23A10.15c 3 ----MLR|LQ 0.061 . SPBP23A10.15c 9 RLQNLPK|LV 0.080 . SPBP23A10.15c 12 NLPKLVR|RF 0.062 . SPBP23A10.15c 13 LPKLVRR|FA 0.334 . SPBP23A10.15c 21 ATTALPK|TE 0.059 . SPBP23A10.15c 28 TETTTLK|NG 0.059 . SPBP23A10.15c 55 GVDAGSR|AE 0.070 . SPBP23A10.15c 60 SRAETAK|NN 0.110 . SPBP23A10.15c 74 LEHLAFK|GT 0.064 . SPBP23A10.15c 77 LAFKGTK|NR 0.064 . SPBP23A10.15c 79 FKGTKNR|SQ 0.154 . SPBP23A10.15c 82 TKNRSQK|AL 0.253 . SPBP23A10.15c 101 LNAYTSR|EQ 0.098 . SPBP23A10.15c 112 YYAHAFK|NA 0.066 . SPBP23A10.15c 138 SASAVER|ER 0.107 . SPBP23A10.15c 140 SAVERER|QV 0.105 . SPBP23A10.15c 145 ERQVILR|EQ 0.127 . SPBP23A10.15c 152 EQEEVDK|MA 0.074 . SPBP23A10.15c 174 QGHPLGR|TI 0.089 . SPBP23A10.15c 180 RTILGPK|EN 0.062 . SPBP23A10.15c 188 NIESLTR|ED 0.060 . SPBP23A10.15c 196 DLLQYIK|DN 0.064 . SPBP23A10.15c 200 YIKDNYR|SD 0.111 . SPBP23A10.15c 203 DNYRSDR|MI 0.347 . SPBP23A10.15c 219 SHEELVK|LA 0.076 . SPBP23A10.15c 223 LVKLAEK|YF 0.075 . SPBP23A10.15c 241 LSLGAPR|GL 0.101 . SPBP23A10.15c 244 GAPRGLK|PR 0.084 . SPBP23A10.15c 246 PRGLKPR|FV 0.297 . SPBP23A10.15c 253 FVGSEIR|AR 0.082 . SPBP23A10.15c 255 GSEIRAR|DD 0.110 . SPBP23A10.15c 274 VEGMSWK|HP 0.064 . SPBP23A10.15c 293 IIGNWDR|AM 0.126 . SPBP23A10.15c 304 SPHLSSR|LS 0.127 . SPBP23A10.15c 342 VTENLGR|ID 0.081 . SPBP23A10.15c 356 TLQNWAR|LT 0.116 . SPBP23A10.15c 362 RLTVATR|AE 0.070 . SPBP23A10.15c 367 TRAEVER|AK 0.137 . SPBP23A10.15c 369 AEVERAK|AQ 0.059 . SPBP23A10.15c 373 RAKAQLR|AS 0.070 . SPBP23A10.15c 392 IAEDIGR|QL 0.085 . SPBP23A10.15c 399 QLLTTGR|RM 0.091 . SPBP23A10.15c 400 LLTTGRR|MS 0.111 . SPBP23A10.15c 409 PQEVDLR|IG 0.075 . SPBP23A10.15c 416 IGQITEK|DV 0.086 . SPBP23A10.15c 420 TEKDVAR|VA 0.152 . SPBP23A10.15c 429 SEMIWDK|DI 0.076 . SPBP23A10.15c 447 GLLDYNR|IR 0.072 . SPBP23A10.15c 449 LDYNRIR|SS 0.120 . SPBP23A10.15c 456 SSISMNR|W- 0.096 . ____________________________^_________________

  • Fasta :-

    >SPBP23A10.15c GTATTACGCTACACCTCTACGGAATACCTTCTTGCTACCTACTTACCCTTTACCATCCAC AGAATCCCACCCAACCAAAGGAGCTTGAATTGATATTACTATGCTGAGGCTTCAGAATTT GCCAAAGCTAGTACGTCGTTTTGCGACTACTGCTTTACCAAAAACAGAAACCACTACTTT AAAAAATGGGCTTACAGTTGCTACGGAACATCATCCGTATGCCCAAACAGCGACCGTCCT TGTGGGCGTTGATGCTGGCTCAAGAGCTGAGACGGCAAAAAATAATGGCGCTGCTCACTT TTTGGAACATTTGGCGTTCAAAGGAACGAAAAATCGCTCCCAAAAAGCATTGGAATTGGA ATTTGAAAATACTGGTGCACATTTGAACGCATACACCTCTCGTGAACAAACCGTTTATTA TGCACATGCGTTCAAAAACGCTGTACCTAATGCAGTTGCCGTTTTGGCCGATATCCTGAC AAATTCAAGCATTTCTGCCTCGGCGGTTGAGCGTGAACGCCAAGTCATCTTAAGAGAGCA AGAAGAGGTTGACAAAATGGCCGATGAAGTAGTCTTTGATCATTTACATGCTACCGCTTA TCAGGGTCATCCTCTTGGACGTACAATTTTGGGTCCTAAGGAAAACATCGAATCTCTTAC CCGTGAGGACCTTCTCCAGTATATTAAGGACAACTACCGTAGTGATAGAATGATTATCTC TTCTGCCGGTTCGATATCTCATGAGGAGCTTGTAAAGCTCGCCGAAAAATATTTTGGCCA TTTGGAGCCTTCAGCTGAGCAATTGTCGCTTGGTGCTCCTCGTGGACTCAAACCTCGTTT CGTCGGGTCTGAAATCCGTGCTCGTGACGATGATTCACCAACTGCCAACATTGCCATTGC TGTTGAAGGTATGAGTTGGAAACACCCAGATTACTTTACTGCATTAGTCATGCAAGCCAT CATTGGTAACTGGGACCGTGCTATGGGAGCATCTCCCCATTTGTCTTCTCGTCTTAGTAC TATTGTTCAACAACATCAACTTGCCAATAGCTTCATGAGTTTCAGTACTAGTTATAGTGA TACTGGACTTTGGGGTATTTATCTTGTCACTGAGAACCTTGGCCGTATTGATGATCTCGT CCACTTTACCCTCCAAAACTGGGCTCGTTTAACCGTTGCAACTCGTGCTGAGGTTGAACG TGCCAAGGCACAACTCCGTGCTTCGCTTTTACTTTCTTTGGATTCAACGACCGCCATTGC AGAGGACATTGGTCGCCAATTGCTTACAACTGGTCGTCGTATGAGCCCTCAAGAGGTTGA TCTCCGTATCGGTCAAATCACTGAAAAAGATGTAGCCCGCGTTGCTTCCGAGATGATTTG GGACAAGGACATTGCTGTTTCTGCTGTTGGTTCCATTGAGGGTTTGTTGGACTACAACCG TATTCGTAGCAGTATTTCTATGAACCGTTGGTAAACGCATTTTCTTGGGACTTTTGACTA TTGTCTATTATTTAATCTTAAGGCTCATCCTTTGCTATTGTTTGTTAACGCCTTTATGAT TTCGTCTGCCTCTTCGCTCTCTTCAGATATATGAGCTGAATTCACCAATATACGTTGTTT ACGTGTTGATCAGTACTATCACCGGTTGGATATGAAGCTGTTTGCACACAAGTAATATCA TTTCAGTAGATGAGAGCATACCAGAGTTGTTTATAGTGCAAAGTCGGTTGCTTACTGCAT CACCTTTGAAAACCCCCTTTCTTCAGAGTTAAACTTTTCTCTCATTTATTATCTGTCAAG GTGTATTGCTCGGACACTTCTTATACTGCCTTTGCATTCATTTTTGCTTGCAATTTATCC TCCCGTGATATTCCTTGTCATCTTATTTTTCTATCTCCCTTCTCATTTAGCAGTCTCTTG AAAATCTCTTTTACTTTCTTGCTTTCTTTCTAGCAACTATTCACTTTATCGCTGATTTAG CGGAAACCGCTTACTAACCTACCCATGTTTACAAATGAAACGGATTCGTTCGTGTTGTAA AATTTATCGACATAACTTTGAATGTTACAGAGTTAATCTGAATTCATTCTTCCTTTTTTG TA
  • Download Fasta

  • Fasta :-

    MLRLQNLPKLVRRFATTALPKTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAK NNGAAHFLEHLAFKGTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVA VLADILTNSSISASAVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPK ENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAP RGLKPRFVGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPH LSSRLSTIVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTVA TRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVAR VASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPBP23A10.15c272 SVEGMSWKHP0.995unspSPBP23A10.15c272 SVEGMSWKHP0.995unspSPBP23A10.15c272 SVEGMSWKHP0.995unspSPBP23A10.15c324 SSFSTSYSDT0.997unspSPBP23A10.15c402 SGRRMSPQEV0.998unspSPBP23A10.15c80 STKNRSQKAL0.995unspSPBP23A10.15c213 SAGSISHEEL0.995unsp

SPBP23A10.15c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India