SPCC1322.05c | vacuolar aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
SPCC1322.05cOTHER0.9998300.0001270.000043
No Results

  • Fasta :-

    >SPCC1322.05c MKLRLDPSTQSNYHDVSISKLDWHARIDFDQELLHGKVSFVIQSARVSQALSHIILDTSY LEIKNVTINDIPTPFRVDKRRGFLGSALHIVPADEIPSSKSCILTILYSTTKDCTALQFL KPEQTIGGKFPYVFSECQAIHARSFIPCQDTPSVKVPCTFKIRSKLPVIASGIPCGTANF CNGSLEYLFEQKNPIPSYLFCILSGDLASTNIGPRSSVYTEPGNLLACKYEFEHDMENFM EAAEQLTLPYCWTRYDFVILPPSFPYGGMENPNATFATPTLIAGDRSNVNVIAHELAHSW SGNLVTNESWQCFWLNEGMTVFLERKILGRLYGEPTRQFEAIIGWGELEESVKLLGEDSE YTKLIQNLEGRDPDDAFSTVPYEKGSNFLYEIERVIGGPSVFEPFLPFYFRKFAKSTVNE VKFKHALYEYFSPLGLASKLDSIDWDTWYHAPGMPPVKPHFDTTLADPCYKLAESWTNSA KNSDDPSKFSSKDIENWSAGQKSLFLDVVYEAVSFPHNYIKRMGDVYSFAESKNAELSFR FFKLALKSKYKPLYNTIAERVGSVGRMKFVRPIFRLLNEADRAFAIETFEKYKHFYHKIC ASQVEKDLGLSE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/40 Sequence name : 40 Sequence length : 612 VALUES OF COMPUTED PARAMETERS Coef20 : 3.703 CoefTot : 0.266 ChDiff : -10 ZoneTo : 5 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.959 1.106 0.182 0.453 MesoH : -0.216 0.314 -0.218 0.237 MuHd_075 : 10.875 3.760 3.318 1.219 MuHd_095 : 10.004 5.993 3.230 1.148 MuHd_100 : 3.002 5.103 1.376 0.833 MuHd_105 : 2.994 4.253 0.259 0.978 Hmax_075 : 1.400 0.300 -1.469 1.740 Hmax_095 : 4.988 2.450 -1.063 1.671 Hmax_100 : -0.200 1.400 -3.013 1.010 Hmax_105 : -5.367 -1.283 -3.361 0.618 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9835 0.0165 DFMC : 0.9617 0.0383
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 612 SPCC1322.05c MKLRLDPSTQSNYHDVSISKLDWHARIDFDQELLHGKVSFVIQSARVSQALSHIILDTSYLEIKNVTINDIPTPFRVDKR 80 RGFLGSALHIVPADEIPSSKSCILTILYSTTKDCTALQFLKPEQTIGGKFPYVFSECQAIHARSFIPCQDTPSVKVPCTF 160 KIRSKLPVIASGIPCGTANFCNGSLEYLFEQKNPIPSYLFCILSGDLASTNIGPRSSVYTEPGNLLACKYEFEHDMENFM 240 EAAEQLTLPYCWTRYDFVILPPSFPYGGMENPNATFATPTLIAGDRSNVNVIAHELAHSWSGNLVTNESWQCFWLNEGMT 320 VFLERKILGRLYGEPTRQFEAIIGWGELEESVKLLGEDSEYTKLIQNLEGRDPDDAFSTVPYEKGSNFLYEIERVIGGPS 400 VFEPFLPFYFRKFAKSTVNEVKFKHALYEYFSPLGLASKLDSIDWDTWYHAPGMPPVKPHFDTTLADPCYKLAESWTNSA 480 KNSDDPSKFSSKDIENWSAGQKSLFLDVVYEAVSFPHNYIKRMGDVYSFAESKNAELSFRFFKLALKSKYKPLYNTIAER 560 VGSVGRMKFVRPIFRLLNEADRAFAIETFEKYKHFYHKICASQVEKDLGLSE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC1322.05c 2 -----MK|LR 0.056 . SPCC1322.05c 4 ---MKLR|LD 0.075 . SPCC1322.05c 20 HDVSISK|LD 0.060 . SPCC1322.05c 26 KLDWHAR|ID 0.136 . SPCC1322.05c 37 QELLHGK|VS 0.061 . SPCC1322.05c 46 FVIQSAR|VS 0.085 . SPCC1322.05c 64 TSYLEIK|NV 0.073 . SPCC1322.05c 76 DIPTPFR|VD 0.067 . SPCC1322.05c 79 TPFRVDK|RR 0.148 . SPCC1322.05c 80 PFRVDKR|RG 0.119 . SPCC1322.05c 81 FRVDKRR|GF 0.209 . SPCC1322.05c 100 DEIPSSK|SC 0.067 . SPCC1322.05c 112 ILYSTTK|DC 0.070 . SPCC1322.05c 121 TALQFLK|PE 0.062 . SPCC1322.05c 129 EQTIGGK|FP 0.056 . SPCC1322.05c 143 CQAIHAR|SF 0.214 . SPCC1322.05c 155 QDTPSVK|VP 0.055 . SPCC1322.05c 161 KVPCTFK|IR 0.057 . SPCC1322.05c 163 PCTFKIR|SK 0.124 . SPCC1322.05c 165 TFKIRSK|LP 0.057 . SPCC1322.05c 192 EYLFEQK|NP 0.054 . SPCC1322.05c 215 STNIGPR|SS 0.138 . SPCC1322.05c 229 GNLLACK|YE 0.067 . SPCC1322.05c 254 LPYCWTR|YD 0.111 . SPCC1322.05c 286 TLIAGDR|SN 0.134 . SPCC1322.05c 325 MTVFLER|KI 0.096 . SPCC1322.05c 326 TVFLERK|IL 0.082 . SPCC1322.05c 330 ERKILGR|LY 0.108 . SPCC1322.05c 337 LYGEPTR|QF 0.105 . SPCC1322.05c 353 ELEESVK|LL 0.064 . SPCC1322.05c 363 EDSEYTK|LI 0.065 . SPCC1322.05c 371 IQNLEGR|DP 0.157 . SPCC1322.05c 384 STVPYEK|GS 0.059 . SPCC1322.05c 394 FLYEIER|VI 0.080 . SPCC1322.05c 411 FLPFYFR|KF 0.085 . SPCC1322.05c 412 LPFYFRK|FA 0.132 . SPCC1322.05c 415 YFRKFAK|ST 0.103 . SPCC1322.05c 422 STVNEVK|FK 0.075 . SPCC1322.05c 424 VNEVKFK|HA 0.076 . SPCC1322.05c 439 PLGLASK|LD 0.060 . SPCC1322.05c 458 PGMPPVK|PH 0.061 . SPCC1322.05c 471 LADPCYK|LA 0.066 . SPCC1322.05c 481 SWTNSAK|NS 0.065 . SPCC1322.05c 488 NSDDPSK|FS 0.079 . SPCC1322.05c 492 PSKFSSK|DI 0.081 . SPCC1322.05c 502 NWSAGQK|SL 0.076 . SPCC1322.05c 521 FPHNYIK|RM 0.076 . SPCC1322.05c 522 PHNYIKR|MG 0.183 . SPCC1322.05c 533 YSFAESK|NA 0.070 . SPCC1322.05c 540 NAELSFR|FF 0.108 . SPCC1322.05c 543 LSFRFFK|LA 0.141 . SPCC1322.05c 547 FFKLALK|SK 0.062 . SPCC1322.05c 549 KLALKSK|YK 0.064 . SPCC1322.05c 551 ALKSKYK|PL 0.066 . SPCC1322.05c 560 YNTIAER|VG 0.086 . SPCC1322.05c 566 RVGSVGR|MK 0.079 . SPCC1322.05c 568 GSVGRMK|FV 0.111 . SPCC1322.05c 571 GRMKFVR|PI 0.147 . SPCC1322.05c 575 FVRPIFR|LL 0.092 . SPCC1322.05c 582 LLNEADR|AF 0.087 . SPCC1322.05c 591 AIETFEK|YK 0.062 . SPCC1322.05c 593 ETFEKYK|HF 0.073 . SPCC1322.05c 598 YKHFYHK|IC 0.069 . SPCC1322.05c 606 CASQVEK|DL 0.098 . ____________________________^_________________

  • Fasta :-

    >SPCC1322.05c CATGTTGCTACTCATCGTATTGCTGTATGATCGCTTTTCCTATTCCTTCCTTTATAAAAC TGTGATTAATCTGTTTTAACTATTTTATACTTAATATTTTTATTTACTCAGTAGCATAAC TCATATTGCTAAAGCTGAGATCGTTGTACTCGTTGGTTTTATCTAGGCTTCTAATATATT GAGCGTTGTTTTCGTTTAAAGAATTCGTTTGTACATTGTCCTAAATTCCTTCAATTAATT TTAAATATGAAACTTCGTTTGGACCCTTCCACTCAATCTAATTATCATGATGTCTCAATC AGTAAGCTCGATTGGCACGCTCGAATTGACTTTGACCAAGAGCTGCTCCATGGTAAAGTA TCCTTTGTGATTCAATCTGCTAGGGTGTCCCAAGCCCTGTCCCATATTATCCTTGACACT TCTTACCTCGAAATCAAGAATGTAACGATTAATGACATCCCTACTCCTTTCCGTGTTGAT AAGCGGCGCGGATTTTTGGGTTCAGCTTTGCATATCGTTCCCGCTGATGAAATCCCTTCC TCAAAATCCTGTATACTTACAATCTTATATTCCACTACTAAGGATTGTACAGCACTTCAG TTTTTGAAGCCTGAACAAACGATAGGTGGTAAATTTCCTTATGTTTTTTCGGAATGTCAA GCCATTCATGCACGTTCATTCATTCCCTGTCAAGATACTCCTTCTGTTAAAGTTCCGTGT ACTTTTAAGATCCGGTCCAAACTTCCCGTAATCGCATCGGGTATCCCATGTGGAACAGCT AATTTCTGCAATGGCTCTTTGGAATACCTGTTTGAGCAAAAAAATCCAATCCCTAGTTAT TTATTTTGCATTCTCAGTGGTGATTTGGCCTCCACAAATATAGGTCCACGTTCTTCTGTA TACACAGAGCCTGGCAACTTGTTAGCTTGCAAATACGAATTTGAACATGACATGGAAAAC TTTATGGAAGCCGCCGAGCAACTAACACTTCCTTATTGCTGGACACGGTATGATTTTGTC ATCCTTCCGCCTTCCTTCCCATACGGAGGTATGGAGAACCCTAATGCTACGTTTGCTACG CCGACACTTATTGCCGGAGATCGCTCCAATGTTAACGTTATTGCTCATGAATTAGCCCAT TCTTGGAGCGGTAATTTAGTTACTAATGAGTCATGGCAATGCTTTTGGTTGAATGAAGGT ATGACTGTTTTCTTGGAACGCAAAATTTTAGGCCGTCTTTATGGTGAGCCGACTCGCCAA TTTGAAGCCATTATTGGCTGGGGTGAATTAGAAGAATCGGTTAAATTGTTGGGTGAAGAT AGTGAGTATACGAAGTTGATTCAAAACCTCGAAGGAAGGGATCCCGATGATGCCTTTTCC ACTGTTCCTTACGAAAAGGGCTCCAATTTCCTCTATGAAATAGAGAGGGTTATTGGTGGT CCTTCTGTTTTTGAACCATTCCTTCCCTTTTACTTTAGGAAATTTGCAAAGTCTACCGTA AACGAAGTCAAATTCAAGCATGCACTGTATGAATACTTCTCACCTCTTGGGCTTGCATCT AAGTTGGACTCGATTGATTGGGATACTTGGTACCATGCTCCTGGTATGCCTCCGGTTAAA CCACATTTTGATACAACGCTTGCAGATCCTTGCTACAAGCTTGCAGAAAGCTGGACTAAT TCTGCTAAAAATTCTGATGATCCCTCCAAGTTTAGCAGCAAAGATATTGAAAATTGGTCA GCGGGCCAGAAATCTTTGTTTTTGGATGTTGTTTATGAAGCTGTCTCTTTTCCTCACAAT TATATTAAAAGAATGGGTGATGTTTACTCGTTTGCCGAATCGAAAAATGCAGAGTTATCT TTCCGGTTTTTTAAACTCGCATTGAAGAGTAAATATAAGCCATTATACAACACTATTGCA GAACGTGTTGGCAGCGTTGGCCGTATGAAGTTTGTTCGCCCAATTTTCAGACTGTTGAAT GAGGCAGATCGTGCTTTTGCAATTGAAACGTTTGAAAAGTATAAGCATTTCTATCATAAA ATTTGTGCTTCTCAAGTTGAAAAGGACTTAGGCTTATCTGAATAGAATTCATAAATGCTG CTTGCCTACTAACAAAAGAATACATCTACATGGAGCCTTTTTCTCGCCTTAGCTTTTTGA TGATAGATGTAGATATTATGATATAAATATATATTATTTTTTTTTTGACCTAGCAAACAA TAAAAAGAAGAAATCATATATTAGGAAGAGAAAACCAAAGTCGTTTCACAATACTAAGAT TTACAACATCTCAACCAAAATTTTTATGATCAACTACGACTTATGTATCTAATGCAAATT TTTTAACATGAATGCAA
  • Download Fasta

  • Fasta :-

    MKLRLDPSTQSNYHDVSISKLDWHARIDFDQELLHGKVSFVIQSARVSQALSHIILDTSY LEIKNVTINDIPTPFRVDKRRGFLGSALHIVPADEIPSSKSCILTILYSTTKDCTALQFL KPEQTIGGKFPYVFSECQAIHARSFIPCQDTPSVKVPCTFKIRSKLPVIASGIPCGTANF CNGSLEYLFEQKNPIPSYLFCILSGDLASTNIGPRSSVYTEPGNLLACKYEFEHDMENFM EAAEQLTLPYCWTRYDFVILPPSFPYGGMENPNATFATPTLIAGDRSNVNVIAHELAHSW SGNLVTNESWQCFWLNEGMTVFLERKILGRLYGEPTRQFEAIIGWGELEESVKLLGEDSE YTKLIQNLEGRDPDDAFSTVPYEKGSNFLYEIERVIGGPSVFEPFLPFYFRKFAKSTVNE VKFKHALYEYFSPLGLASKLDSIDWDTWYHAPGMPPVKPHFDTTLADPCYKLAESWTNSA KNSDDPSKFSSKDIENWSAGQKSLFLDVVYEAVSFPHNYIKRMGDVYSFAESKNAELSFR FFKLALKSKYKPLYNTIAERVGSVGRMKFVRPIFRLLNEADRAFAIETFEKYKHFYHKIC ASQVEKDLGLSE

  • title: Zn binding site
  • coordinates: H294,H298,E317
No Results
No Results
IDSitePeptideScoreMethod
SPCC1322.05c490 SPSKFSSKDI0.998unsp

SPCC1322.05c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India