SPCC1682.12c | ubiquitin C-terminal hydrolase Ubp16

_IDPredictionOTHERSPmTPCS_Position
SPCC1682.12cOTHER0.9988400.0000990.001061
No Results

  • Fasta :-

    >SPCC1682.12c MSLATLQGQSLDFAVKHSLDDLLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRKSF SAPTSPTRNKRSGSSSQEYKKSSGTRGDGANDFVDEDPAFIPPARILFPEEKLSMEWDNI MPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQHVARAY PNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHP SRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSSLADSLKHFVHAEKLT KQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGP YMSDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQ AYILQYKRKSTSSSKHKLNTENTVTKTSNKKRRKISF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/265 Sequence name : 265 Sequence length : 457 VALUES OF COMPUTED PARAMETERS Coef20 : 3.839 CoefTot : 0.171 ChDiff : 26 ZoneTo : 11 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.924 0.988 0.111 0.471 MesoH : -0.268 0.229 -0.324 0.208 MuHd_075 : 19.643 11.099 6.463 2.431 MuHd_095 : 18.487 14.157 6.210 3.486 MuHd_100 : 17.198 12.491 5.536 3.621 MuHd_105 : 17.156 9.033 4.571 3.249 Hmax_075 : 15.633 14.233 2.218 4.328 Hmax_095 : 8.487 11.100 0.704 3.510 Hmax_100 : 9.100 11.100 0.568 3.510 Hmax_105 : 8.312 7.700 0.211 3.089 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8595 0.1405 DFMC : 0.8272 0.1728
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 457 SPCC1682.12c MSLATLQGQSLDFAVKHSLDDLLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRKSFSAPTSPTRNKRSGSSSQEYK 80 KSSGTRGDGANDFVDEDPAFIPPARILFPEEKLSMEWDNIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSL 160 SCRMNACVLCRMEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHP 240 SRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSSLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQM 320 TIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYMSDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVW 400 LKFDDDFVSNSSIDRVLNQQAYILQYKRKSTSSSKHKLNTENTVTKTSNKKRRKISF 480 ......................................................................P......... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ SPCC1682.12c 16 SLDFAVK|HS 0.059 . SPCC1682.12c 24 SLDDLLK|NP 0.056 . SPCC1682.12c 28 LLKNPVR|FR 0.095 . SPCC1682.12c 30 KNPVRFR|PA 0.107 . SPCC1682.12c 51 TVLNNPK|QS 0.068 . SPCC1682.12c 57 KQSTVSR|KS 0.123 . SPCC1682.12c 58 QSTVSRK|SF 0.155 . SPCC1682.12c 68 APTSPTR|NK 0.081 . SPCC1682.12c 70 TSPTRNK|RS 0.065 . SPCC1682.12c 71 SPTRNKR|SG 0.778 *ProP* SPCC1682.12c 80 SSSQEYK|KS 0.087 . SPCC1682.12c 81 SSQEYKK|SS 0.231 . SPCC1682.12c 86 KKSSGTR|GD 0.148 . SPCC1682.12c 105 AFIPPAR|IL 0.116 . SPCC1682.12c 112 ILFPEEK|LS 0.062 . SPCC1682.12c 163 QHSLSCR|MN 0.121 . SPCC1682.12c 171 NACVLCR|ME 0.088 . SPCC1682.12c 178 MEQHVAR|AY 0.117 . SPCC1682.12c 183 ARAYPNK|GT 0.080 . SPCC1682.12c 186 YPNKGTK|RA 0.082 . SPCC1682.12c 187 PNKGTKR|AS 0.172 . SPCC1682.12c 192 KRASAFK|PS 0.085 . SPCC1682.12c 201 GIQSMLK|VI 0.066 . SPCC1682.12c 208 VISSHFR|PY 0.135 . SPCC1682.12c 211 SHFRPYR|QE 0.413 . SPCC1682.12c 220 DAHEFMR|YL 0.108 . SPCC1682.12c 228 LVDAWQK|SC 0.071 . SPCC1682.12c 235 SCLQNHK|NL 0.059 . SPCC1682.12c 242 NLDHPSR|ET 0.131 . SPCC1682.12c 249 ETSVVHR|IF 0.180 . SPCC1682.12c 256 IFGGYLR|QQ 0.066 . SPCC1682.12c 265 ILCSVCK|KP 0.061 . SPCC1682.12c 266 LCSVCKK|PS 0.133 . SPCC1682.12c 282 DLSVDAK|GS 0.076 . SPCC1682.12c 291 SLADSLK|HF 0.073 . SPCC1682.12c 298 HFVHAEK|LT 0.058 . SPCC1682.12c 301 HAEKLTK|QN 0.056 . SPCC1682.12c 304 KLTKQNK|YR 0.065 . SPCC1682.12c 306 TKQNKYR|CE 0.116 . SPCC1682.12c 311 YRCENCK|QL 0.078 . SPCC1682.12c 318 QLVDASK|QM 0.061 . SPCC1682.12c 324 KQMTIYR|AP 0.091 . SPCC1682.12c 334 ILTIHFK|RF 0.068 . SPCC1682.12c 335 LTIHFKR|FT 0.341 . SPCC1682.12c 345 NGFQSSK|IS 0.059 . SPCC1682.12c 348 QSSKISK|QI 0.085 . SPCC1682.12c 385 HAGGSTR|SG 0.119 . SPCC1682.12c 394 HYYSFCK|SS 0.075 . SPCC1682.12c 402 SNGVWLK|FD 0.079 . SPCC1682.12c 415 SNSSIDR|VL 0.105 . SPCC1682.12c 427 AYILQYK|RK 0.060 . SPCC1682.12c 428 YILQYKR|KS 0.111 . SPCC1682.12c 429 ILQYKRK|ST 0.208 . SPCC1682.12c 435 KSTSSSK|HK 0.064 . SPCC1682.12c 437 TSSSKHK|LN 0.083 . SPCC1682.12c 446 TENTVTK|TS 0.077 . SPCC1682.12c 450 VTKTSNK|KR 0.058 . SPCC1682.12c 451 TKTSNKK|RR 0.078 . SPCC1682.12c 452 KTSNKKR|RK 0.223 . SPCC1682.12c 453 TSNKKRR|KI 0.357 . SPCC1682.12c 454 SNKKRRK|IS 0.100 . ____________________________^_________________

  • Fasta :-

    >SPCC1682.12c TTTCACAGTACCGGCGAGACAATTGGGGAAGGACTTGAGGAAGATATTACTTTTGGATCC ATAAAGTTGTTTTCGTACATTAGATATCCATATCCTTTTCCGACTTTTTTGTCTTTCGTG GGTAACGACGTTTGTTTACGTTACAGTAGTATTACCAGTTTTCTGGCGAGTTCTTTTCCC TTAGTTGTTAAGAAGTTGATTGTTTTTATTGCTTTCCGCGTTTAAAAATATAAAACGCGA AAGCACGTGTCGTTGTCTCTTTATCCTCTTTTTTGTTCTATGGAGTGTTAAATCGTAGAG CTGGATAACTTCCATTTTTTATTTATACATTACTTTCAAAAATATTCGAAACACACAAAA GTTGCCTGGTTTATTATTATATAGTTTTTTTGTTACGTTCTATCAAATTTTTGAAAACAC GTCAAATCCTCGTTTCTAATTACCCGCCGAATTTTTTGCATCACTTTATATCCTTTTCAT TTAAAAGTAATTTTAATCACTTTATCTACGGTTTCGTCTGCTTTACCACCTTTGCATTAT TTTTTTCTAAATTCATTTACTACACCTATAGTGGCTGGTCATTTCAAAATAATTTGTGAG TTTAAATTTTCTCATTGAACGCTTTTTTTTTGCTTTATTTTATTTTTGGTGTTTTTATTT TCGACAACTCACGAATAAGTTTGTTTACATTCGTTTTTGTTGATTGTTTACATCAAACTG CTTACTCCGTTCACAATAGCTCTTGAAGATAATTGTGAAAAGCATCACTCTTCTTTTCTA CGTTTCTTGCTTTAAAAGATAGCTTTTTTTTTTCTTCTTTTCTAACATTTTTCTTCATAA TTTCAAATTTTTGATTGCTTGTTGTTTTTCCATTCCGTTGTTGACATGTCGCTTGCTACT TTACAAGGACAGTCACTAGATTTTGCAGTCAAGCATTCACTAGATGATTTGCTTAAAAAT CCCGTTCGCTTTCGTCCCGCGGTTGTTTCCTCACCATCGGTTCCTGAAGGTACTTACACT GTCTTAAACAATCCAAAGCAATCTACTGTTAGCCGTAAGTCATTTTCAGCGCCTACTTCC CCAACTAGAAACAAACGTTCTGGTTCTTCTTCCCAGGAATACAAAAAATCTTCAGGAACA AGGGGTGATGGAGCTAATGATTTTGTGGATGAGGATCCTGCTTTTATACCTCCGGCTCGC ATTCTATTTCCCGAAGAAAAATTGTCGATGGAATGGGATAATATCATGCCCAATGCTCCG GGGCTCGTAAATCTCGGTAATACTTGTTTCATGAATTCAGTACTTCAGTTGATGACTCAA ACTCCACCGTTGGTTCAATATCTTTTATCCGGTCAACATTCTTTATCCTGCCGTATGAAT GCATGTGTACTCTGTAGAATGGAGCAACATGTCGCCCGTGCCTATCCCAACAAAGGCACC AAACGAGCTTCGGCCTTCAAACCTTCAGGTATACAAAGTATGCTCAAAGTAATTTCCAGT CATTTCCGCCCATATCGCCAAGAAGATGCTCATGAATTTATGCGATATTTGGTTGATGCT TGGCAAAAGTCTTGTCTTCAAAACCATAAAAATCTTGATCATCCAAGCAGGGAGACTTCG GTAGTACACAGAATTTTTGGTGGTTACCTACGCCAGCAGATTCTATGCTCAGTTTGTAAA AAACCTTCCAACACCTACCAAGCTTTACTTGACTTATCTGTGGATGCGAAGGGCTCCTCC TTGGCAGATTCCTTAAAGCATTTTGTGCATGCAGAAAAACTTACCAAACAAAACAAATAT CGATGTGAAAATTGTAAGCAACTGGTGGATGCGTCCAAGCAAATGACTATTTATCGGGCA CCAAATATTTTAACCATTCACTTCAAGCGGTTCACATTCAACGGTTTCCAATCTAGCAAA ATCAGTAAGCAAATTTCATACCCTGAATCATTCAATCTCGGTCCGTATATGTCAGATCCC AATTGTTCTTGTTGGTACGAATTAATTGGGGTTCTTGTACATGCAGGCGGAAGTACCCGA AGCGGCCATTATTATTCGTTTTGCAAAAGTAGTAATGGTGTTTGGCTTAAATTTGACGAT GATTTCGTTTCCAATTCCAGTATTGATCGAGTTTTGAATCAACAGGCCTATATTTTGCAA TACAAGAGGAAATCAACTTCATCGTCTAAACACAAGCTAAACACCGAAAACACGGTTACC AAAACTTCTAATAAAAAACGGAGAAAAATTTCATTTTAATGCGATACAGTTAGCTTGAGC AGTTAAAGTTTTTGCTTCCTTTTGCCTATCTTTTTTTTTAATATGCTA
  • Download Fasta

  • Fasta :-

    MSLATLQGQSLDFAVKHSLDDLLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRKSF SAPTSPTRNKRSGSSSQEYKKSSGTRGDGANDFVDEDPAFIPPARILFPEEKLSMEWDNI MPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQHVARAY PNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHP SRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSSLADSLKHFVHAEKLT KQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGP YMSDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQ AYILQYKRKSTSSSKHKLNTENTVTKTSNKKRRKISF

  • title: Active Site
  • coordinates: N129,C134,H388,D405
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPCC1682.12c65 SSAPTSPTRN0.996unspSPCC1682.12c65 SSAPTSPTRN0.996unspSPCC1682.12c65 SSAPTSPTRN0.996unspSPCC1682.12c76 SSGSSSQEYK0.992unspSPCC1682.12c83 SYKKSSGTRG0.995unspSPCC1682.12c351 SSKQISYPES0.995unspSPCC1682.12c430 SYKRKSTSSS0.997unspSPCC1682.12c432 SRKSTSSSKH0.992unspSPCC1682.12c56 SQSTVSRKSF0.993unspSPCC1682.12c59 SVSRKSFSAP0.996unsp

SPCC1682.12c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India