SPCC16A11.12c | ubiquitin C-terminal hydrolase Ubp1

_IDPredictionOTHERSPmTPCS_Position
SPCC16A11.12cOTHER0.9998940.0000700.000036
No Results

  • Fasta :-

    >SPCC16A11.12c MASTATQNASTRYSQIWIDQPASLPFQDSINLIKEDKEKWKKEKTAFLIDYDWFEGYVDF IYGEGDNPGPITQWRLLDEKNELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVL LVGLAAEQKPFVDIYPINFTLHVLFDPINGENTSYSPLYQIDEPYHSDEPYAFSFSRSDT LRSLYKQVMEAFQISDGTSFRLWYLNKSNLSSRFVSLSEFNDQPAIALLSEYAVCMTIFE IDIADGSLLLEFQHPNGEWLSDSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHT HELTKYFLSDSYEKDINYNNPLGMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEF NTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFERPDLFDEHPLHVQRVANQCWDIH TKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLPTSAKWRHKVVYVPPFGT QSPVELYLELLMESTVIQMKFQATEKLQKMGLECGELTACDIYRGKVYKVLKNKDKISKK IHKWDHVVLYGSTANGLTIPIVHGCKRPAMPGSYQSNDVFGFPLQLNVRSRNVLTNDLVK EIVELYRVYAGIDVAIGTLQLGLKRMESKAGKWECIKEIEVKRFEIVEEEEIVIDDKTVI MCLWNDQQYEKLFYNCEWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFR PATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHE WLSSQKSMLYDLYAVDNHHGFMSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIVTSSA YVLFYRAKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/918 Sequence name : 918 Sequence length : 849 VALUES OF COMPUTED PARAMETERS Coef20 : 4.349 CoefTot : 0.293 ChDiff : -25 ZoneTo : 18 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.224 1.653 0.152 0.591 MesoH : -0.239 0.439 -0.340 0.313 MuHd_075 : 16.194 7.420 4.815 2.031 MuHd_095 : 20.872 12.177 4.978 5.256 MuHd_100 : 15.665 9.306 3.947 3.592 MuHd_105 : 12.315 7.050 2.955 1.760 Hmax_075 : 10.150 6.767 1.381 3.115 Hmax_095 : 11.987 7.788 0.494 4.305 Hmax_100 : 10.300 7.000 0.428 4.280 Hmax_105 : 8.633 6.183 1.070 3.115 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8492 0.1508 DFMC : 0.8051 0.1949
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 849 SPCC16A11.12c MASTATQNASTRYSQIWIDQPASLPFQDSINLIKEDKEKWKKEKTAFLIDYDWFEGYVDFIYGEGDNPGPITQWRLLDEK 80 NELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVLLVGLAAEQKPFVDIYPINFTLHVLFDPINGENTSYSPLYQ 160 IDEPYHSDEPYAFSFSRSDTLRSLYKQVMEAFQISDGTSFRLWYLNKSNLSSRFVSLSEFNDQPAIALLSEYAVCMTIFE 240 IDIADGSLLLEFQHPNGEWLSDSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNN 320 PLGMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFERPD 400 LFDEHPLHVQRVANQCWDIHTKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLPTSAKWRHKVVYVPPFGT 480 QSPVELYLELLMESTVIQMKFQATEKLQKMGLECGELTACDIYRGKVYKVLKNKDKISKKIHKWDHVVLYGSTANGLTIP 560 IVHGCKRPAMPGSYQSNDVFGFPLQLNVRSRNVLTNDLVKEIVELYRVYAGIDVAIGTLQLGLKRMESKAGKWECIKEIE 640 VKRFEIVEEEEIVIDDKTVIMCLWNDQQYEKLFYNCEWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFR 720 PATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHG 800 FMSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFYRAKN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..................................PP............................................ 800 ................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ SPCC16A11.12c 12 TQNASTR|YS 0.135 . SPCC16A11.12c 34 DSINLIK|ED 0.058 . SPCC16A11.12c 37 NLIKEDK|EK 0.071 . SPCC16A11.12c 39 IKEDKEK|WK 0.066 . SPCC16A11.12c 41 EDKEKWK|KE 0.066 . SPCC16A11.12c 42 DKEKWKK|EK 0.094 . SPCC16A11.12c 44 EKWKKEK|TA 0.077 . SPCC16A11.12c 75 GPITQWR|LL 0.115 . SPCC16A11.12c 80 WRLLDEK|NE 0.053 . SPCC16A11.12c 84 DEKNELK|HS 0.055 . SPCC16A11.12c 117 EGLAIER|KV 0.082 . SPCC16A11.12c 118 GLAIERK|VL 0.087 . SPCC16A11.12c 129 GLAAEQK|PF 0.065 . SPCC16A11.12c 177 YAFSFSR|SD 0.086 . SPCC16A11.12c 182 SRSDTLR|SL 0.300 . SPCC16A11.12c 186 TLRSLYK|QV 0.103 . SPCC16A11.12c 201 SDGTSFR|LW 0.084 . SPCC16A11.12c 207 RLWYLNK|SN 0.076 . SPCC16A11.12c 213 KSNLSSR|FV 0.254 . SPCC16A11.12c 266 LSDSITK|EQ 0.058 . SPCC16A11.12c 274 QNLTINK|EI 0.061 . SPCC16A11.12c 305 HTHELTK|YF 0.058 . SPCC16A11.12c 314 LSDSYEK|DI 0.065 . SPCC16A11.12c 327 PLGMMGK|VA 0.060 . SPCC16A11.12c 337 SYASLLK|MI 0.071 . SPCC16A11.12c 354 VSPSSFK|FI 0.089 . SPCC16A11.12c 368 TYFSGYR|QQ 0.093 . SPCC16A11.12c 389 LHEDLNR|IQ 0.069 . SPCC16A11.12c 393 LNRIQIK|PY 0.078 . SPCC16A11.12c 398 IKPYFER|PD 0.082 . SPCC16A11.12c 411 HPLHVQR|VA 0.107 . SPCC16A11.12c 422 CWDIHTK|RN 0.068 . SPCC16A11.12c 423 WDIHTKR|ND 0.200 . SPCC16A11.12c 437 LFQGMYK|ST 0.069 . SPCC16A11.12c 448 CSICYQK|ST 0.070 . SPCC16A11.12c 467 PLPTSAK|WR 0.067 . SPCC16A11.12c 469 PTSAKWR|HK 0.121 . SPCC16A11.12c 471 SAKWRHK|VV 0.079 . SPCC16A11.12c 500 STVIQMK|FQ 0.067 . SPCC16A11.12c 506 KFQATEK|LQ 0.061 . SPCC16A11.12c 509 ATEKLQK|MG 0.058 . SPCC16A11.12c 524 TACDIYR|GK 0.090 . SPCC16A11.12c 526 CDIYRGK|VY 0.055 . SPCC16A11.12c 529 YRGKVYK|VL 0.076 . SPCC16A11.12c 532 KVYKVLK|NK 0.065 . SPCC16A11.12c 534 YKVLKNK|DK 0.071 . SPCC16A11.12c 536 VLKNKDK|IS 0.071 . SPCC16A11.12c 539 NKDKISK|KI 0.071 . SPCC16A11.12c 540 KDKISKK|IH 0.084 . SPCC16A11.12c 543 ISKKIHK|WD 0.080 . SPCC16A11.12c 566 PIVHGCK|RP 0.052 . SPCC16A11.12c 567 IVHGCKR|PA 0.287 . SPCC16A11.12c 589 PLQLNVR|SR 0.092 . SPCC16A11.12c 591 QLNVRSR|NV 0.128 . SPCC16A11.12c 600 LTNDLVK|EI 0.060 . SPCC16A11.12c 607 EIVELYR|VY 0.077 . SPCC16A11.12c 624 TLQLGLK|RM 0.058 . SPCC16A11.12c 625 LQLGLKR|ME 0.180 . SPCC16A11.12c 629 LKRMESK|AG 0.066 . SPCC16A11.12c 632 MESKAGK|WE 0.078 . SPCC16A11.12c 637 GKWECIK|EI 0.070 . SPCC16A11.12c 642 IKEIEVK|RF 0.076 . SPCC16A11.12c 643 KEIEVKR|FE 0.203 . SPCC16A11.12c 657 EIVIDDK|TV 0.069 . SPCC16A11.12c 671 NDQQYEK|LF 0.065 . SPCC16A11.12c 682 CEWIFEK|IQ 0.065 . SPCC16A11.12c 701 CLLEFSK|PE 0.057 . SPCC16A11.12c 717 WYCPGCK|AF 0.062 . SPCC16A11.12c 720 PGCKAFR|PA 0.101 . SPCC16A11.12c 724 AFRPATK|RL 0.065 . SPCC16A11.12c 725 FRPATKR|LE 0.139 . SPCC16A11.12c 730 KRLEIWR|LP 0.080 . SPCC16A11.12c 733 EIWRLPK|IL 0.114 . SPCC16A11.12c 741 LVIHLNR|FS 0.141 . SPCC16A11.12c 750 GHGGDLR|RR 0.072 . SPCC16A11.12c 751 HGGDLRR|RR 0.084 . SPCC16A11.12c 752 GGDLRRR|RK 0.094 . SPCC16A11.12c 753 GDLRRRR|KR 0.337 . SPCC16A11.12c 754 DLRRRRK|RR 0.158 . SPCC16A11.12c 755 LRRRRKR|RD 0.625 *ProP* SPCC16A11.12c 756 RRRRKRR|DL 0.760 *ProP* SPCC16A11.12c 769 VFDLNLK|QF 0.048 . SPCC16A11.12c 777 FLSPFIK|DH 0.077 . SPCC16A11.12c 786 EWLSSQK|SM 0.064 . SPCC16A11.12c 812 HYTAYAR|DA 0.140 . SPCC16A11.12c 821 SSQTFFK|FD 0.089 . SPCC16A11.12c 846 AYVLFYR|AK 0.083 . SPCC16A11.12c 848 VLFYRAK|N- 0.068 . ____________________________^_________________

  • Fasta :-

    >SPCC16A11.12c GTTGAAAACTCAAACTTGACAGAGGGCAGCAATATGCGTCACCTGTATAAATCCTTTTTC ACCATTTGGTACAACAAGTTTACTTAAACCAACAACTCCATTCCCCCAATTTTTTGCAAT TTATAAGAGTGGAACTTGAAGAAACAAAAATATAACGAATAAATGACCATGTTTTGAGAA TGGCATCAACTGCTACTCAAAACGCAAGCACTCGATATTCCCAAATTTGGATCGACCAAC CTGCTTCATTGCCGTTCCAAGATTCGATAAATTTAATTAAAGAGGATAAAGAAAAATGGA AAAAAGAAAAAACTGCCTTTTTAATTGACTATGACTGGTTCGAAGGATACGTTGACTTTA TATATGGAGAAGGCGACAACCCTGGTCCTATAACTCAATGGAGGCTGCTGGATGAAAAAA ACGAGCTTAAACATTCTTTGGAGGAATCTATTGATTATAGCATTGTCTCTGCTTCGCTAT GGCATATGCTTGTTGAGTGGTTTGGATTAGAAGGTCTAGCTATAGAGCGAAAAGTTCTTT TGGTAGGATTGGCTGCTGAGCAAAAGCCATTCGTAGATATCTATCCTATAAACTTTACTT TGCACGTTTTATTCGACCCAATAAACGGTGAAAACACGAGCTATTCACCATTATACCAAA TTGATGAACCATATCATAGTGATGAACCCTATGCGTTTAGCTTTTCCCGAAGTGATACCC TTCGGTCTTTGTACAAACAAGTGATGGAAGCTTTCCAAATATCTGATGGTACTTCTTTCC GTTTATGGTATCTAAACAAAAGTAATCTATCTTCTAGGTTTGTAAGTTTGTCGGAGTTCA ATGATCAACCTGCGATTGCTTTGCTTTCCGAGTATGCTGTTTGCATGACTATTTTCGAAA TAGATATTGCCGATGGAAGCTTATTGCTCGAGTTTCAACATCCTAACGGAGAGTGGTTAT CTGACTCTATAACCAAAGAGCAAAATTTAACAATAAATAAAGAAATCGGACTCTGCGGTC TTTACAATTTGGGTAATTCATGCTATATGAATTCTGCCCTTCAATGTATGATACATACAC ACGAACTTACAAAATATTTTCTTAGTGATTCTTATGAAAAGGATATTAATTACAACAATC CGTTGGGAATGATGGGGAAAGTTGCCTTGTCTTATGCTAGTCTACTGAAGATGATCCATC ATACTGCTGATATGCACTCGGTGTCACCTAGTTCTTTCAAATTTATAATTGGCGAGTTTA ATACCTATTTTTCTGGATATCGTCAGCAAGATTCTCAGGAATTCATCGCCTTTTTCTTAG ACGGGTTACACGAAGATTTGAATCGAATTCAGATAAAACCATACTTTGAAAGGCCAGATT TATTTGACGAACACCCATTACATGTTCAGAGAGTTGCAAATCAATGTTGGGATATTCATA CAAAACGAAATGATTCCATAATTGTTCAGTTGTTTCAAGGAATGTATAAAAGCACCTTAG AGTGCTCCATATGCTATCAAAAATCAACTGCGTTTGATCCGTTCATGTATCTTACTCTTC CACTTCCTACTAGTGCAAAATGGCGACACAAGGTAGTGTACGTCCCGCCATTTGGCACAC AGAGTCCTGTGGAATTGTATTTGGAGCTTCTCATGGAAAGTACGGTAATCCAAATGAAGT TTCAAGCTACGGAAAAGCTTCAAAAGATGGGACTCGAATGCGGGGAACTTACTGCTTGTG ACATTTATCGGGGAAAGGTGTACAAGGTATTGAAAAATAAAGACAAAATATCTAAAAAAA TTCATAAATGGGATCATGTTGTACTTTATGGAAGTACTGCAAACGGATTAACAATACCTA TCGTCCATGGATGTAAACGACCGGCAATGCCCGGATCATACCAGTCTAACGATGTGTTTG GATTTCCTTTACAACTCAACGTCCGTTCTCGAAATGTACTCACAAATGATTTAGTGAAAG AGATTGTCGAACTGTATCGAGTTTATGCAGGCATAGACGTAGCAATCGGAACTCTTCAGC TTGGACTGAAGCGGATGGAAAGTAAGGCCGGGAAATGGGAATGCATAAAGGAAATTGAGG TTAAAAGGTTTGAAATAGTGGAGGAAGAGGAAATCGTTATTGACGACAAAACTGTAATTA TGTGTCTATGGAACGATCAACAATATGAAAAGTTATTTTATAACTGCGAATGGATATTTG AAAAAATTCAGTTCCATATGGAGTCCATCACCCTTGAAGATTGTTTACTGGAGTTTTCCA AGCCAGAGCAGCTTGATTTACAGGATTCCTGGTATTGTCCTGGGTGTAAGGCATTTCGAC CGGCAACAAAACGGCTGGAGATCTGGCGATTGCCAAAAATACTAGTCATTCATTTAAATC GATTCAGCGGCCACGGTGGAGATTTGCGGAGAAGACGTAAACGAAGGGATTTAGTAGTTT ATCCAGTATTTGATCTCAATTTGAAGCAATTTTTGAGTCCATTTATAAAAGATCATGAGT GGCTATCGTCACAGAAATCGATGCTTTACGATTTGTATGCAGTGGACAATCATCACGGGT TTATGAGTAATGGTCATTATACTGCCTATGCAAGAGATGCATCGAGCCAAACATTCTTTA AGTTTGATGATACAGCTATTTGTGAAATAGATCCGGAGGATATTGTCACATCGTCTGCTT ATGTATTGTTTTACAGAGCAAAGAATTAAAGAGACGTATAATAGAGGTGATATGAACTTT ACTCTAACTAAAGGCTAATGTCGTTTGTTTGAATATGTATGAAACTGGAAATTGAATATG AACGAAGACGAGGAAGAGGTGGGAGTTTTTGCAATAAAAAAGTAATAAAATAAGCTATTA AAATA
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  • Fasta :-

    MASTATQNASTRYSQIWIDQPASLPFQDSINLIKEDKEKWKKEKTAFLIDYDWFEGYVDF IYGEGDNPGPITQWRLLDEKNELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVL LVGLAAEQKPFVDIYPINFTLHVLFDPINGENTSYSPLYQIDEPYHSDEPYAFSFSRSDT LRSLYKQVMEAFQISDGTSFRLWYLNKSNLSSRFVSLSEFNDQPAIALLSEYAVCMTIFE IDIADGSLLLEFQHPNGEWLSDSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHT HELTKYFLSDSYEKDINYNNPLGMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEF NTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFERPDLFDEHPLHVQRVANQCWDIH TKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLPTSAKWRHKVVYVPPFGT QSPVELYLELLMESTVIQMKFQATEKLQKMGLECGELTACDIYRGKVYKVLKNKDKISKK IHKWDHVVLYGSTANGLTIPIVHGCKRPAMPGSYQSNDVFGFPLQLNVRSRNVLTNDLVK EIVELYRVYAGIDVAIGTLQLGLKRMESKAGKWECIKEIEVKRFEIVEEEEIVIDDKTVI MCLWNDQQYEKLFYNCEWIFEKIQFHMESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFR PATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRKRRDLVVYPVFDLNLKQFLSPFIKDHE WLSSQKSMLYDLYAVDNHHGFMSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIVTSSA YVLFYRAKN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPCC16A11.12c176 SAFSFSRSDT0.991unspSPCC16A11.12c176 SAFSFSRSDT0.991unspSPCC16A11.12c176 SAFSFSRSDT0.991unspSPCC16A11.12c426 SKRNDSIIVQ0.993unspSPCC16A11.12c14 SSTRYSQIWI0.991unspSPCC16A11.12c86 SELKHSLEES0.995unsp

SPCC16A11.12c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India