SPCC1919.12c | metallopeptidase (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPCC1919.12cOTHER0.9171860.0777890.005024
No Results

  • Fasta :-

    >SPCC1919.12c MTNSRRHIFERICAKAFQSSLTCSIFGFTVLLILYLLDWKRIAQVPGPNLLKDLEFQRAW NDLEYISSLPHPYNSKQNEHVRSYILKSMRELEATNQSYITVIDDTLTNITFESTDNDTL TYFEGDNILVKFEGKSKDLFPILLSAHFDSVSTGYGATDDGMGVATVMAIARYYAKNQPN RDLIININNAEEDYLFGAKAFASHKLSKNVTAFVNLEGAGSGGKAMLFRSSNGHVSSAYF KGNHYPLASILGNDFFKRGVIRSQTDYIVYEKMHNHTAGLDIAFYENRDIYHTRKDDINH LMPSSLRHMMYTASNAVKNLLNDSKSDLTKFRKPMFFLAFGKYWQLNLPIYQVLNIIFAV ICPIVLLLTLIRFPSLYEQLKKPRYTVCFVVSCIFVSIFDTLTVLLLTWINPYVINSHTG LILALFYLTNLIALAFSFRAAATHSKLSSEDLSSIEIVFIWYAQILWYLVFIVSVILSIY FQLGSTYWVTLSYLCTFTCCIMTIIRINYFVDNVVTTQTTHEEDALIGSSINTSSHQHYG STLNSTPHRRNSIALSNRAHVKLIDNIWTVIYFIFNVPFPVFLCYDILVETILPAGSQTL TDSVFSSKLYKLVIFVVFLSLVNSGPFIFRALSKKSLAVLTMLWITLFVQALSVNPFTES APLKLSFVQMYDMDRMNNTVYVKNISPFTQDVLSLNPHFLFSNGSCNTSLCYYESTDPDF GGLKTPMSIHIEREKHQLDISINSGSKWCYVDFNTSVFFEAINGNSISGMYSSVRMGQRS FYAPYTLNLTITEVVKAEVTCLYDDIHEGIIPAYNTFVEHLPSWVAGVKASTGLLKVKSS IVI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/184 Sequence name : 184 Sequence length : 843 VALUES OF COMPUTED PARAMETERS Coef20 : 4.701 CoefTot : -0.403 ChDiff : 0 ZoneTo : 52 KR : 7 DE : 2 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.788 0.590 0.916 MesoH : 1.015 1.401 0.083 0.534 MuHd_075 : 48.336 24.688 12.557 10.190 MuHd_095 : 37.542 26.147 12.633 8.179 MuHd_100 : 31.779 19.567 11.573 6.671 MuHd_105 : 25.093 12.837 9.293 5.043 Hmax_075 : 12.900 17.383 3.044 5.270 Hmax_095 : 17.800 14.263 6.129 5.930 Hmax_100 : 14.700 14.500 5.039 5.410 Hmax_105 : 7.200 15.517 6.018 3.733 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4060 0.5940 DFMC : 0.4834 0.5166 This protein is probably imported in mitochondria. f(Ser) = 0.0769 f(Arg) = 0.0769 CMi = 0.43290 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 843 SPCC1919.12c MTNSRRHIFERICAKAFQSSLTCSIFGFTVLLILYLLDWKRIAQVPGPNLLKDLEFQRAWNDLEYISSLPHPYNSKQNEH 80 VRSYILKSMRELEATNQSYITVIDDTLTNITFESTDNDTLTYFEGDNILVKFEGKSKDLFPILLSAHFDSVSTGYGATDD 160 GMGVATVMAIARYYAKNQPNRDLIININNAEEDYLFGAKAFASHKLSKNVTAFVNLEGAGSGGKAMLFRSSNGHVSSAYF 240 KGNHYPLASILGNDFFKRGVIRSQTDYIVYEKMHNHTAGLDIAFYENRDIYHTRKDDINHLMPSSLRHMMYTASNAVKNL 320 LNDSKSDLTKFRKPMFFLAFGKYWQLNLPIYQVLNIIFAVICPIVLLLTLIRFPSLYEQLKKPRYTVCFVVSCIFVSIFD 400 TLTVLLLTWINPYVINSHTGLILALFYLTNLIALAFSFRAAATHSKLSSEDLSSIEIVFIWYAQILWYLVFIVSVILSIY 480 FQLGSTYWVTLSYLCTFTCCIMTIIRINYFVDNVVTTQTTHEEDALIGSSINTSSHQHYGSTLNSTPHRRNSIALSNRAH 560 VKLIDNIWTVIYFIFNVPFPVFLCYDILVETILPAGSQTLTDSVFSSKLYKLVIFVVFLSLVNSGPFIFRALSKKSLAVL 640 TMLWITLFVQALSVNPFTESAPLKLSFVQMYDMDRMNNTVYVKNISPFTQDVLSLNPHFLFSNGSCNTSLCYYESTDPDF 720 GGLKTPMSIHIEREKHQLDISINSGSKWCYVDFNTSVFFEAINGNSISGMYSSVRMGQRSFYAPYTLNLTITEVVKAEVT 800 CLYDDIHEGIIPAYNTFVEHLPSWVAGVKASTGLLKVKSSIVI 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ........................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC1919.12c 5 --MTNSR|RH 0.069 . SPCC1919.12c 6 -MTNSRR|HI 0.135 . SPCC1919.12c 11 RRHIFER|IC 0.159 . SPCC1919.12c 15 FERICAK|AF 0.072 . SPCC1919.12c 40 LYLLDWK|RI 0.054 . SPCC1919.12c 41 YLLDWKR|IA 0.143 . SPCC1919.12c 52 PGPNLLK|DL 0.068 . SPCC1919.12c 58 KDLEFQR|AW 0.102 . SPCC1919.12c 76 PHPYNSK|QN 0.066 . SPCC1919.12c 82 KQNEHVR|SY 0.132 . SPCC1919.12c 87 VRSYILK|SM 0.128 . SPCC1919.12c 90 YILKSMR|EL 0.099 . SPCC1919.12c 131 GDNILVK|FE 0.079 . SPCC1919.12c 135 LVKFEGK|SK 0.069 . SPCC1919.12c 137 KFEGKSK|DL 0.082 . SPCC1919.12c 172 TVMAIAR|YY 0.126 . SPCC1919.12c 176 IARYYAK|NQ 0.058 . SPCC1919.12c 181 AKNQPNR|DL 0.145 . SPCC1919.12c 199 DYLFGAK|AF 0.056 . SPCC1919.12c 205 KAFASHK|LS 0.059 . SPCC1919.12c 208 ASHKLSK|NV 0.096 . SPCC1919.12c 224 GAGSGGK|AM 0.051 . SPCC1919.12c 229 GKAMLFR|SS 0.187 . SPCC1919.12c 241 VSSAYFK|GN 0.077 . SPCC1919.12c 257 LGNDFFK|RG 0.058 . SPCC1919.12c 258 GNDFFKR|GV 0.437 . SPCC1919.12c 262 FKRGVIR|SQ 0.164 . SPCC1919.12c 272 DYIVYEK|MH 0.053 . SPCC1919.12c 288 IAFYENR|DI 0.116 . SPCC1919.12c 294 RDIYHTR|KD 0.112 . SPCC1919.12c 295 DIYHTRK|DD 0.095 . SPCC1919.12c 307 LMPSSLR|HM 0.070 . SPCC1919.12c 318 TASNAVK|NL 0.065 . SPCC1919.12c 325 NLLNDSK|SD 0.071 . SPCC1919.12c 330 SKSDLTK|FR 0.080 . SPCC1919.12c 332 SDLTKFR|KP 0.085 . SPCC1919.12c 333 DLTKFRK|PM 0.072 . SPCC1919.12c 342 FFLAFGK|YW 0.064 . SPCC1919.12c 372 LLLTLIR|FP 0.085 . SPCC1919.12c 381 SLYEQLK|KP 0.058 . SPCC1919.12c 382 LYEQLKK|PR 0.090 . SPCC1919.12c 384 EQLKKPR|YT 0.094 . SPCC1919.12c 439 ALAFSFR|AA 0.110 . SPCC1919.12c 446 AAATHSK|LS 0.070 . SPCC1919.12c 506 CIMTIIR|IN 0.074 . SPCC1919.12c 549 LNSTPHR|RN 0.127 . SPCC1919.12c 550 NSTPHRR|NS 0.117 . SPCC1919.12c 558 SIALSNR|AH 0.092 . SPCC1919.12c 562 SNRAHVK|LI 0.084 . SPCC1919.12c 608 DSVFSSK|LY 0.062 . SPCC1919.12c 611 FSSKLYK|LV 0.088 . SPCC1919.12c 630 SGPFIFR|AL 0.099 . SPCC1919.12c 634 IFRALSK|KS 0.077 . SPCC1919.12c 635 FRALSKK|SL 0.183 . SPCC1919.12c 664 TESAPLK|LS 0.081 . SPCC1919.12c 675 QMYDMDR|MN 0.081 . SPCC1919.12c 683 NNTVYVK|NI 0.067 . SPCC1919.12c 724 PDFGGLK|TP 0.052 . SPCC1919.12c 733 MSIHIER|EK 0.103 . SPCC1919.12c 735 IHIEREK|HQ 0.060 . SPCC1919.12c 747 SINSGSK|WC 0.063 . SPCC1919.12c 775 GMYSSVR|MG 0.087 . SPCC1919.12c 779 SVRMGQR|SF 0.113 . SPCC1919.12c 796 TITEVVK|AE 0.060 . SPCC1919.12c 829 SWVAGVK|AS 0.062 . SPCC1919.12c 836 ASTGLLK|VK 0.063 . SPCC1919.12c 838 TGLLKVK|SS 0.089 . ____________________________^_________________

  • Fasta :-

    >SPCC1919.12c CAGAAGATACTGTATATAGTAATACTGAGATTGGCTGATGTCAATATCGACTACCAACGT GCTTTTTTCAACGCCATATATTAATCTACATTCCTTTAAATCTTCATTAATTAATTAATT TATTTACGAATTATATCTTGTAATGACAAATTCTAGACGGCATATATTTGAACGCATATG TGCTAAGGCTTTTCAGTCCAGTTTAACCTGCTCGATTTTTGGATTCACTGTACTGCTTAT CTTATATCTATTAGATTGGAAACGGATTGCCCAAGTTCCAGGACCTAATTTGCTAAAAGA TTTGGAGTTTCAACGAGCTTGGAATGACCTAGAGTATATATCAAGTTTGCCTCATCCCTA TAATTCCAAGCAAAATGAACATGTTCGATCCTACATACTAAAAAGTATGCGAGAGCTGGA AGCTACAAATCAATCATATATTACAGTTATCGATGATACTTTAACAAACATTACTTTCGA ATCGACTGACAACGATACTCTTACATATTTTGAAGGAGATAACATTCTTGTTAAATTCGA AGGGAAATCGAAGGATTTGTTTCCCATACTCCTGTCAGCACATTTTGATTCTGTATCCAC TGGCTATGGTGCTACTGATGATGGTATGGGAGTTGCAACTGTGATGGCGATTGCCCGATA TTATGCTAAAAATCAACCGAACAGAGATTTGATAATAAACATAAACAATGCTGAGGAGGA TTATCTTTTTGGTGCTAAAGCTTTTGCTTCCCATAAACTCTCAAAAAACGTTACTGCTTT CGTCAATTTGGAAGGAGCCGGTTCAGGTGGAAAAGCGATGCTTTTTCGGTCAAGCAATGG ACATGTCAGTAGCGCCTACTTCAAAGGAAATCATTATCCCCTCGCTTCGATATTAGGTAA CGACTTTTTCAAGAGGGGTGTCATTCGAAGTCAAACTGATTACATTGTGTATGAGAAAAT GCACAATCATACTGCAGGCTTAGATATCGCTTTTTATGAGAATAGAGATATTTATCATAC AAGGAAAGATGACATTAATCACCTAATGCCCAGTTCACTTCGACATATGATGTACACTGC GTCGAATGCTGTTAAAAATTTACTCAACGACTCTAAGTCAGACTTAACTAAATTTCGTAA ACCGATGTTTTTTCTTGCTTTTGGAAAGTATTGGCAATTGAATTTACCTATATATCAAGT TTTGAACATAATTTTCGCTGTCATTTGCCCGATTGTTTTATTATTAACTTTAATTCGCTT TCCTTCACTTTACGAGCAGCTCAAGAAGCCTAGATATACTGTTTGTTTCGTTGTTTCCTG TATTTTTGTTTCCATATTTGATACCTTGACCGTATTATTGTTAACATGGATAAATCCTTA TGTGATCAATTCTCATACCGGTTTAATCCTTGCTTTATTTTATCTCACAAACTTAATTGC TTTGGCGTTTTCATTTAGGGCGGCTGCGACTCACAGTAAGCTTTCTTCTGAAGACCTTAG TTCCATCGAAATTGTTTTTATCTGGTACGCTCAAATTTTATGGTACTTGGTTTTTATTGT TTCGGTTATTTTATCCATTTACTTTCAGCTTGGTTCTACATATTGGGTGACGCTTTCATA CCTTTGTACTTTTACCTGCTGTATAATGACGATAATTCGAATTAATTACTTTGTAGACAA TGTAGTAACCACACAAACTACTCATGAAGAAGACGCACTGATTGGCTCCTCTATTAATAC TAGTAGTCATCAGCACTATGGAAGCACGTTGAATTCTACTCCTCATCGTCGAAATTCCAT AGCATTGTCAAATAGAGCACATGTAAAGCTTATTGACAACATTTGGACTGTCATATATTT TATTTTTAACGTTCCGTTTCCAGTATTTCTTTGCTACGATATACTCGTTGAGACTATTTT ACCAGCCGGTAGTCAAACTTTGACTGATTCAGTTTTTTCCAGCAAGCTGTATAAGTTAGT TATTTTTGTTGTTTTCTTGTCTTTGGTTAACAGTGGACCTTTCATATTTCGTGCCTTGTC AAAAAAGTCGCTTGCTGTTCTTACTATGCTTTGGATTACATTATTTGTGCAGGCTTTATC AGTTAATCCGTTCACCGAGTCTGCACCACTTAAGCTTTCTTTTGTTCAGATGTATGATAT GGATCGTATGAACAATACCGTTTATGTTAAAAACATATCACCTTTCACTCAAGATGTCTT GTCTTTAAATCCACACTTTTTATTTTCCAATGGATCTTGTAACACCTCACTTTGTTACTA TGAATCAACAGATCCTGATTTTGGAGGGTTGAAAACTCCAATGTCCATTCATATTGAACG AGAAAAACACCAGCTGGACATAAGTATAAACTCCGGTAGTAAATGGTGTTATGTTGATTT TAATACTTCTGTTTTTTTTGAAGCTATAAATGGGAATTCTATTAGTGGAATGTATTCATC CGTTCGCATGGGGCAAAGATCATTCTACGCTCCTTACACTTTGAACCTTACAATTACCGA AGTAGTCAAAGCGGAAGTTACTTGTTTATACGATGATATACATGAAGGAATTATTCCCGC ATACAACACTTTTGTAGAACATTTACCAAGTTGGGTAGCTGGAGTTAAAGCAAGTACTGG GTTGCTTAAAGTGAAGTCTTCAATTGTTATATAATAAGAGTTTTGCATGAAGGAAGGCAT GCAGCAAACATTCAGAACATTACAGACTGTTCCTAAGAAATTATTTATTCGGAATTTCAG GTAATGGCTTTCTTATCTTAATTGGTTGGGAAGAAGCTTCAACATTCTGACTACTCAAGA GAGAGTTATCACTGTCAAGGAATTTGAGGTTTTGTATAGGAGATTGTTTGATAGGTGAAC AATAATCCCTAGGATCATCACTTACAATTCGTCTGATTGAACGCGCCCTCTCGAGAGATC TCGTTTCATGTGATTTTTGAACATGGAGGTCATATATCCTAGTGCAATAGTTTACAGGAA ACATTCCTGAATTCCCAAGTTTTTCTGCCTTACTATTTACCTTCTCGCCCATGTACCAAT CCGGTCCAAGTTGTTCGCTCACCTGAATGACATCCCCTGTGTGCAAATCGAGCTCTTTTT CATTCCTTCCCGTAAATGAATAAATTGCTTTGACGAAAACTGTTTCCTTTTTCGATTTTC TATTGGTCAGCGTATTTAAAAAAATTTTTTTACTCTTTAAACTTACCTTTTCGGAGTAGA AAACGGTGTTGGTGATATTTTTTCAGTATTAGTGGTCTTAGTAAATAACTTACTAAGTGA TGGATCCATGGGTGATGCAAGAAATTCATTTTCAACGCTTCTTTCGCTACTTTGGATCTT TTTCTGAGGCGTCAATGAGTTTTGAGAGTTGAATATTGTATTTAAAATACCAGTCGACTC TTTAAAGAAGTTTAGCTCATAAACAATTAGTTCTGTTAATTGTTGGTACTGATCAGCCTC AACGTCTTTTAATGCGATCATCCGATTCTTTACTTGCTCGGTGGATTCTTCGAACTTGTA CAGCGCCAGGCGAATATCTTCTTCTAAACGCGAATCTTCCTTCTTTTCTTTAAAAGACTT TTGTAGGAGAGATTCGTATGCTTGTCTTCGGCTTTCCAATTTTTTTCTTGCAGAATGAAA ATCCTTGGCTTGTACTAGATAACGTTTTAAAAAATCGAGATAACATACTCTCGCTTTGTA TGCTAAAGACGTTTGATGTTCTCCAATCTTTAGATTGGCTTTTCCTAATTGCGACAAGGT GATCCCTATGAGTTAATAGAGGCAGAAGGCTTTTCTTACCTACCATAGCTTGAGTCTTGT GGTAACTCTTTTGAATGATTTATCATCACTTTCCCTAGATTTTCACAAGCAAGACATTTT TCTTTATCCTCACCATCGACCTTTTTTACTAATTATTTTGTTAACAGTAAAATAATTGTT TTGGCGTCAATGTATCTCTACTTACAAATTGAATCAATCCATATTGTCGTTGCTTGAAAT AGTTTAGATAGTCCTACATTATGTTAAGAAACTTTGTCTGCAGCATATTTACTCACCTTC TTCTCGAATCGCTATTTCTTGCTCAAGTTCAAGAAAACTATCAGGCAAGTGTGCTCTTTG GTCTCCCAATGGCTAATAAGGTCAGTAATACAATTCCTTTCTTTTCGTTCGTTGTTTTGA GTATTTTGAACAAACACTACATCGGCTCAGTTTCACTCGCCATGGAAAGGTATACTCACT TTTTCGTTTCTAAAAAAAAGGGGTCAATAATCTTCATAATCTGCGTAACCTTTCTCCTTC TTAATATTTCCTTACGTCCAAGAAAAAAATCTAGACACCATTTTGATGGTTCATCGACCA TACGCATGCGTTGTGCTCAAAAGTCTTTACAATTAAGCATAAACGATACTTATAGAAAAG ATAATTTACTTCTTTGCTTACTAAATCACTTCAGCCGTGTGTGTTAAAGGATCAATATCT CTACCGAGAAGGTTCTTATATAAGCGATGTTTGTTTGTTTGTTTACCCAAAATTTTGGAA GCGGAGGGGATGCGTTTATTATGATGTTGAACGTAATGAAATACATATTTTTTTTTCTTA AGTGTGTTAAAAATAATTGATTTGAGGGAAGCTGTTGTTACGTCGAAGG
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  • Fasta :-

    MTNSRRHIFERICAKAFQSSLTCSIFGFTVLLILYLLDWKRIAQVPGPNLLKDLEFQRAW NDLEYISSLPHPYNSKQNEHVRSYILKSMRELEATNQSYITVIDDTLTNITFESTDNDTL TYFEGDNILVKFEGKSKDLFPILLSAHFDSVSTGYGATDDGMGVATVMAIARYYAKNQPN RDLIININNAEEDYLFGAKAFASHKLSKNVTAFVNLEGAGSGGKAMLFRSSNGHVSSAYF KGNHYPLASILGNDFFKRGVIRSQTDYIVYEKMHNHTAGLDIAFYENRDIYHTRKDDINH LMPSSLRHMMYTASNAVKNLLNDSKSDLTKFRKPMFFLAFGKYWQLNLPIYQVLNIIFAV ICPIVLLLTLIRFPSLYEQLKKPRYTVCFVVSCIFVSIFDTLTVLLLTWINPYVINSHTG LILALFYLTNLIALAFSFRAAATHSKLSSEDLSSIEIVFIWYAQILWYLVFIVSVILSIY FQLGSTYWVTLSYLCTFTCCIMTIIRINYFVDNVVTTQTTHEEDALIGSSINTSSHQHYG STLNSTPHRRNSIALSNRAHVKLIDNIWTVIYFIFNVPFPVFLCYDILVETILPAGSQTL TDSVFSSKLYKLVIFVVFLSLVNSGPFIFRALSKKSLAVLTMLWITLFVQALSVNPFTES APLKLSFVQMYDMDRMNNTVYVKNISPFTQDVLSLNPHFLFSNGSCNTSLCYYESTDPDF GGLKTPMSIHIEREKHQLDISINSGSKWCYVDFNTSVFFEAINGNSISGMYSSVRMGQRS FYAPYTLNLTITEVVKAEVTCLYDDIHEGIIPAYNTFVEHLPSWVAGVKASTGLLKVKSS IVI

  • title: metal binding site
  • coordinates: H147,D159,E191,E192,E217,H292
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPCC1919.12c453 SSEDLSSIEI0.993unspSPCC1919.12c453 SSEDLSSIEI0.993unspSPCC1919.12c453 SSEDLSSIEI0.993unspSPCC1919.12c633 SFRALSKKSL0.995unspSPCC1919.12c88 SYILKSMREL0.995unspSPCC1919.12c448 SHSKLSSEDL0.998unsp

SPCC1919.12c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India