_IDPredictionOTHERSPmTPCS_Position
SPCC5E4.05cOTHER0.9999640.0000210.000015
No Results
  • Fasta :-

    >SPCC5E4.05c MADLYTKDWTDVKDKPVARVVFIHGFGEHVNAYPEFFEALNERNIEVYTFDQRGFGHSRK GGPKKQGCTGGWSLVFPDLDYQILRASDTELPLFLWGHSMGGGLALRYGISGTHRHKLAG VIAQAPMLRCHPDTEPNFLLRKALTLVSKVHPNFLFDSDVQSQHITRDEAVNQRLQDDPL VSSVGSLQVFSDMLNRGTKTIELAPQFFLPLLITHGTDDNVTCSDSSKEFYENAGTKDKT YQSYPGFYHSLHIEKKPEVYEYLDKVAAWIYEHSKPSETVKSEQETAVEHPKPTATTSAP SASPTGVPVEEESHKATSDAVPPAEAKPEPVPASAAERAPTSESTTVPETIVASTTKVIS EPAPRVTTAATADIVTNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/873 Sequence name : 873 Sequence length : 378 VALUES OF COMPUTED PARAMETERS Coef20 : 3.642 CoefTot : 0.141 ChDiff : -13 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.047 0.965 -0.005 0.558 MesoH : -0.511 0.146 -0.373 0.194 MuHd_075 : 12.342 5.286 1.990 0.413 MuHd_095 : 35.044 13.126 7.237 5.832 MuHd_100 : 29.794 8.573 5.958 4.535 MuHd_105 : 21.199 5.277 4.036 3.118 Hmax_075 : -2.800 3.100 -3.216 2.147 Hmax_095 : 2.100 3.850 -2.505 3.130 Hmax_100 : -0.200 0.800 -2.891 2.650 Hmax_105 : 7.467 1.750 -0.941 3.337 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8720 0.1280 DFMC : 0.8952 0.1048
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 378 SPCC5E4.05c MADLYTKDWTDVKDKPVARVVFIHGFGEHVNAYPEFFEALNERNIEVYTFDQRGFGHSRKGGPKKQGCTGGWSLVFPDLD 80 YQILRASDTELPLFLWGHSMGGGLALRYGISGTHRHKLAGVIAQAPMLRCHPDTEPNFLLRKALTLVSKVHPNFLFDSDV 160 QSQHITRDEAVNQRLQDDPLVSSVGSLQVFSDMLNRGTKTIELAPQFFLPLLITHGTDDNVTCSDSSKEFYENAGTKDKT 240 YQSYPGFYHSLHIEKKPEVYEYLDKVAAWIYEHSKPSETVKSEQETAVEHPKPTATTSAPSASPTGVPVEEESHKATSDA 320 VPPAEAKPEPVPASAAERAPTSESTTVPETIVASTTKVISEPAPRVTTAATADIVTNK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPCC5E4.05c 7 MADLYTK|DW 0.069 . SPCC5E4.05c 13 KDWTDVK|DK 0.065 . SPCC5E4.05c 15 WTDVKDK|PV 0.081 . SPCC5E4.05c 19 KDKPVAR|VV 0.167 . SPCC5E4.05c 43 FEALNER|NI 0.102 . SPCC5E4.05c 53 VYTFDQR|GF 0.096 . SPCC5E4.05c 59 RGFGHSR|KG 0.096 . SPCC5E4.05c 60 GFGHSRK|GG 0.103 . SPCC5E4.05c 64 SRKGGPK|KQ 0.079 . SPCC5E4.05c 65 RKGGPKK|QG 0.176 . SPCC5E4.05c 85 LDYQILR|AS 0.115 . SPCC5E4.05c 107 GGGLALR|YG 0.085 . SPCC5E4.05c 115 GISGTHR|HK 0.114 . SPCC5E4.05c 117 SGTHRHK|LA 0.074 . SPCC5E4.05c 129 AQAPMLR|CH 0.090 . SPCC5E4.05c 141 EPNFLLR|KA 0.094 . SPCC5E4.05c 142 PNFLLRK|AL 0.072 . SPCC5E4.05c 149 ALTLVSK|VH 0.057 . SPCC5E4.05c 167 QSQHITR|DE 0.102 . SPCC5E4.05c 174 DEAVNQR|LQ 0.088 . SPCC5E4.05c 196 FSDMLNR|GT 0.104 . SPCC5E4.05c 199 MLNRGTK|TI 0.162 . SPCC5E4.05c 228 TCSDSSK|EF 0.074 . SPCC5E4.05c 237 YENAGTK|DK 0.067 . SPCC5E4.05c 239 NAGTKDK|TY 0.061 . SPCC5E4.05c 255 HSLHIEK|KP 0.063 . SPCC5E4.05c 256 SLHIEKK|PE 0.090 . SPCC5E4.05c 265 VYEYLDK|VA 0.064 . SPCC5E4.05c 275 WIYEHSK|PS 0.072 . SPCC5E4.05c 281 KPSETVK|SE 0.089 . SPCC5E4.05c 292 TAVEHPK|PT 0.067 . SPCC5E4.05c 315 VEEESHK|AT 0.081 . SPCC5E4.05c 327 VPPAEAK|PE 0.056 . SPCC5E4.05c 338 PASAAER|AP 0.097 . SPCC5E4.05c 357 IVASTTK|VI 0.066 . SPCC5E4.05c 365 ISEPAPR|VT 0.099 . SPCC5E4.05c 378 ADIVTNK|-- 0.069 . ____________________________^_________________
  • Fasta :-

    >SPCC5E4.05c TTTTCATATTTCATAACTTTTATAAAGCATATATATCATTCATATTAAAATCATTCTATC CTTTCTGGAATCCACCTTCAGAACAATCTCGTTACACTATCTGCTCAGAACCAACATTGA ACGCAGGTGATATTTCCAGGATTGTTTTTGGCTCTATTGCTCTCAAATGGCTGATTTATA TACAAAAGATTGGACTGATGTTAAAGACAAGCCCGTTGCACGTGTTGTTTTTATCCATGG ATTTGGCGAACATGTCAATGCTTATCCAGAGTTTTTTGAAGCATTGAACGAGCGTAATAT TGAAGTTTATACCTTTGATCAGAGAGGTTTTGGTCATTCAAGAAAGGGAGGTCCAAAGAA GCAGGGTTGTACTGGTGGTTGGTCTCTAGTATTTCCTGACCTGGATTATCAAATTCTTCG TGCTAGCGATACGGAGCTTCCCCTATTTTTATGGGGACATTCTATGGGTGGAGGATTGGC TTTACGTTATGGTATCAGTGGGACACATCGTCACAAGCTGGCTGGTGTAATCGCACAAGC TCCTATGCTTCGTTGTCATCCTGACACTGAACCAAACTTTTTGTTACGAAAAGCACTTAC TTTGGTTTCCAAGGTACATCCTAATTTTCTTTTCGATAGCGATGTCCAAAGTCAACACAT AACCAGGGATGAAGCCGTCAATCAACGTTTGCAGGATGATCCTCTTGTTTCATCGGTAGG TTCGTTGCAAGTCTTTAGTGACATGCTAAACAGAGGTACGAAAACTATTGAATTAGCTCC TCAGTTTTTCCTTCCTCTCCTTATAACCCATGGTACTGATGATAATGTGACTTGTTCCGA TTCTTCAAAAGAATTTTATGAAAATGCGGGCACTAAAGATAAGACATATCAATCGTATCC AGGATTTTACCATTCTTTGCATATTGAGAAGAAACCAGAGGTTTATGAGTACCTTGACAA AGTTGCTGCTTGGATTTACGAACACTCAAAGCCTAGTGAAACTGTAAAGTCGGAACAGGA AACCGCTGTTGAACATCCTAAGCCTACCGCTACTACATCTGCTCCTTCTGCTTCTCCTAC TGGAGTTCCTGTTGAAGAGGAGTCACATAAAGCCACGTCGGATGCTGTTCCTCCTGCTGA AGCAAAGCCTGAGCCTGTACCAGCATCAGCTGCAGAAAGGGCGCCTACTTCTGAAAGTAC CACTGTTCCTGAGACCATAGTGGCATCAACAACCAAGGTAATTTCAGAACCAGCTCCTAG AGTTACTACTGCGGCCACCGCCGATATTGTAACCAATAAATAAACTTTTTGAGGTTCAAT CCTTACAAAATGGAACCTTTAATGACCGATACTGTTTTGCTACCCAAGTACTGTAAGTTG CACGCAAATGTGATATTAAAGTACATATATAGATAATAAATTATTTTCATTAGTTACATA GATACACTCGCATTAATCGTTAAATAGGAGAAACTTTATATGAGA
  • Download Fasta
  • Fasta :-

    MADLYTKDWTDVKDKPVARVVFIHGFGEHVNAYPEFFEALNERNIEVYTFDQRGFGHSRK GGPKKQGCTGGWSLVFPDLDYQILRASDTELPLFLWGHSMGGGLALRYGISGTHRHKLAG VIAQAPMLRCHPDTEPNFLLRKALTLVSKVHPNFLFDSDVQSQHITRDEAVNQRLQDDPL VSSVGSLQVFSDMLNRGTKTIELAPQFFLPLLITHGTDDNVTCSDSSKEFYENAGTKDKT YQSYPGFYHSLHIEKKPEVYEYLDKVAAWIYEHSKPSETVKSEQETAVEHPKPTATTSAP SASPTGVPVEEESHKATSDAVPPAEAKPEPVPASAAERAPTSESTTVPETIVASTTKVIS EPAPRVTTAATADIVTNK

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPCC5E4.05cT2940.7350.432SPCC5E4.05cT3410.7220.293SPCC5E4.05cT2970.7160.656SPCC5E4.05cT3050.7160.585SPCC5E4.05cT2960.7110.509SPCC5E4.05cT3170.7090.046SPCC5E4.05cT3450.7090.043SPCC5E4.05cT3550.7020.287SPCC5E4.05cT3560.6910.071SPCC5E4.05cT3460.6870.118SPCC5E4.05cT2860.6860.023SPCC5E4.05cT3500.6760.028SPCC5E4.05cS3340.6430.087SPCC5E4.05cS3030.6380.227SPCC5E4.05cT3760.6290.112SPCC5E4.05cS3010.6230.385SPCC5E4.05cS2980.6170.034SPCC5E4.05cS3180.6090.064SPCC5E4.05cS3130.6070.030SPCC5E4.05cS3540.6070.025SPCC5E4.05cS3420.6010.084SPCC5E4.05cS3440.5930.041SPCC5E4.05cT3680.5880.117SPCC5E4.05cT3710.5840.082SPCC5E4.05cT3670.5780.228SPCC5E4.05cS3600.5320.079
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
SPCC5E4.05cT2940.7350.432SPCC5E4.05cT3410.7220.293SPCC5E4.05cT2970.7160.656SPCC5E4.05cT3050.7160.585SPCC5E4.05cT2960.7110.509SPCC5E4.05cT3170.7090.046SPCC5E4.05cT3450.7090.043SPCC5E4.05cT3550.7020.287SPCC5E4.05cT3560.6910.071SPCC5E4.05cT3460.6870.118SPCC5E4.05cT2860.6860.023SPCC5E4.05cT3500.6760.028SPCC5E4.05cS3340.6430.087SPCC5E4.05cS3030.6380.227SPCC5E4.05cT3760.6290.112SPCC5E4.05cS3010.6230.385SPCC5E4.05cS2980.6170.034SPCC5E4.05cS3180.6090.064SPCC5E4.05cS3130.6070.030SPCC5E4.05cS3540.6070.025SPCC5E4.05cS3420.6010.084SPCC5E4.05cS3440.5930.041SPCC5E4.05cT3680.5880.117SPCC5E4.05cT3710.5840.082SPCC5E4.05cT3670.5780.228SPCC5E4.05cS3600.5320.079
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPCC5E4.05c226 STCSDSSKEF0.991unspSPCC5E4.05c226 STCSDSSKEF0.991unspSPCC5E4.05c226 STCSDSSKEF0.991unspSPCC5E4.05c227 SCSDSSKEFY0.994unspSPCC5E4.05c231 YSKEFYENAG0.991unspSPCC5E4.05c282 SETVKSEQET0.991unspSPCC5E4.05c313 SVEEESHKAT0.994unspSPCC5E4.05c58 SGFGHSRKGG0.994unspSPCC5E4.05c87 SILRASDTEL0.993unsp

SPCC5E4.05c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India