TA02750 | pepsinogen, putative

UniProt_ID: Q4UHM4

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
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Curated_GO_Component_IDs:
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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TA02750	SP	0.062423	0.937189	0.000388	CS pos: 16-17. INT-LP. Pr: 0.7166

No Results

Fasta :-
>TA02750 MIKCIIIAIIIKLINTLPYCSDININKPCIYNGPIQKRIFVLKSLTPNENKTTEEINEEN WHNVNKGFIHYFYRSSVTGSGPTASNGPKEAVTEDSSTVGPNTVTEENTSTPGKGANSMP MECNSSNIEEYPSGVGRGPHSVTGKTKLINIKLHNGILIPHLRHVQYALNMGVGTPKQEI NPIIDTGSTNTWVISQNCISNTCEGVASFNSKKSETFNPINEGLKIKFGTGIIKGVLGID NITIGNDIIKQQIFGLVNEENSNIFNVIKFQGIIGLGFPKLAFDHHTSLYDNYSKQINAD LIFSLYFSNQYSYLMMGGIDKRFYKGDLYMLPVIRELYWEIKLYELWIGNIKLCCNNESY IIFDSGTSFNTMPHTEFLLFKQYIKPKYCNGLENIYEEYPIIKYKLEGGIEINIEPQEYI FLHKDKCRIAYMQIDVPSSYGRAFILGTQAFMTHYYTVYQRQPPMVRYGACSNSNSTKTG SLTPQRGFLTSERGLFSYTSYLPLVVIYLQYLVLFPGSI
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA02750.fa Sequence name : TA02750 Sequence length : 519 VALUES OF COMPUTED PARAMETERS Coef20 : 4.457 CoefTot : -2.216 ChDiff : 2 ZoneTo : 48 KR : 6 DE : 1 CleavSite : 48 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 2.224 0.354 0.709 MesoH : -0.241 0.346 -0.300 0.286 MuHd_075 : 39.474 29.168 14.840 9.657 MuHd_095 : 28.071 23.128 9.684 6.997 MuHd_100 : 29.152 24.039 9.846 6.294 MuHd_105 : 34.834 29.875 12.047 7.652 Hmax_075 : 6.067 21.700 3.634 7.210 Hmax_095 : 12.250 30.275 3.476 9.275 Hmax_100 : 18.600 24.800 5.882 6.640 Hmax_105 : 20.000 28.100 6.936 8.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5612 0.4388 DFMC : 0.8644 0.1356

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 519 TA02750 MIKCIIIAIIIKLINTLPYCSDININKPCIYNGPIQKRIFVLKSLTPNENKTTEEINEENWHNVNKGFIHYFYRSSVTGS 80 GPTASNGPKEAVTEDSSTVGPNTVTEENTSTPGKGANSMPMECNSSNIEEYPSGVGRGPHSVTGKTKLINIKLHNGILIP 160 HLRHVQYALNMGVGTPKQEINPIIDTGSTNTWVISQNCISNTCEGVASFNSKKSETFNPINEGLKIKFGTGIIKGVLGID 240 NITIGNDIIKQQIFGLVNEENSNIFNVIKFQGIIGLGFPKLAFDHHTSLYDNYSKQINADLIFSLYFSNQYSYLMMGGID 320 KRFYKGDLYMLPVIRELYWEIKLYELWIGNIKLCCNNESYIIFDSGTSFNTMPHTEFLLFKQYIKPKYCNGLENIYEEYP 400 IIKYKLEGGIEINIEPQEYIFLHKDKCRIAYMQIDVPSSYGRAFILGTQAFMTHYYTVYQRQPPMVRYGACSNSNSTKTG 480 SLTPQRGFLTSERGLFSYTSYLPLVVIYLQYLVLFPGSI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA02750 3 ----MIK|CI 0.068 . TA02750 12 IIAIIIK|LI 0.062 . TA02750 27 SDININK|PC 0.063 . TA02750 37 YNGPIQK|RI 0.059 . TA02750 38 NGPIQKR|IF 0.123 . TA02750 43 KRIFVLK|SL 0.124 . TA02750 51 LTPNENK|TT 0.063 . TA02750 66 NWHNVNK|GF 0.077 . TA02750 74 FIHYFYR|SS 0.182 . TA02750 89 TASNGPK|EA 0.083 . TA02750 114 NTSTPGK|GA 0.085 . TA02750 137 YPSGVGR|GP 0.148 . TA02750 145 PHSVTGK|TK 0.070 . TA02750 147 SVTGKTK|LI 0.085 . TA02750 152 TKLINIK|LH 0.065 . TA02750 163 ILIPHLR|HV 0.164 . TA02750 177 MGVGTPK|QE 0.061 . TA02750 212 VASFNSK|KS 0.078 . TA02750 213 ASFNSKK|SE 0.121 . TA02750 225 PINEGLK|IK 0.058 . TA02750 227 NEGLKIK|FG 0.081 . TA02750 234 FGTGIIK|GV 0.072 . TA02750 250 IGNDIIK|QQ 0.070 . TA02750 269 NIFNVIK|FQ 0.088 . TA02750 280 IGLGFPK|LA 0.070 . TA02750 295 LYDNYSK|QI 0.063 . TA02750 321 MMGGIDK|RF 0.060 . TA02750 322 MGGIDKR|FY 0.193 . TA02750 325 IDKRFYK|GD 0.149 . TA02750 335 YMLPVIR|EL 0.081 . TA02750 342 ELYWEIK|LY 0.063 . TA02750 352 LWIGNIK|LC 0.057 . TA02750 381 TEFLLFK|QY 0.064 . TA02750 385 LFKQYIK|PK 0.056 . TA02750 387 KQYIKPK|YC 0.086 . TA02750 403 EEYPIIK|YK 0.064 . TA02750 405 YPIIKYK|LE 0.087 . TA02750 424 EYIFLHK|DK 0.071 . TA02750 426 IFLHKDK|CR 0.066 . TA02750 428 LHKDKCR|IA 0.140 . TA02750 442 VPSSYGR|AF 0.121 . TA02750 461 YYTVYQR|QP 0.074 . TA02750 467 RQPPMVR|YG 0.075 . TA02750 478 SNSNSTK|TG 0.074 . TA02750 486 GSLTPQR|GF 0.106 . TA02750 493 GFLTSER|GL 0.084 . ____________________________^_________________

Fasta :-
>TA02750 ATGATAAAATGTATAATAATCGCAATAATAATAAAATTAATAAATACATTACCATATTGT AGTGATATTAATATTAATAAACCTTGTATATATAATGGTCCAATACAAAAGAGAATATTT GTATTGAAATCATTAACACCAAATGAGAATAAAACAACAGAAGAAATAAATGAAGAAAAT TGGCATAATGTAAATAAAGGATTTATACATTATTTTTATCGTTCTTCCGTTACGGGGTCA GGTCCAACAGCAAGTAATGGACCTAAGGAAGCTGTTACTGAGGATAGTAGTACAGTTGGA CCAAACACCGTTACTGAGGAAAATACTAGTACCCCGGGAAAGGGAGCTAATTCTATGCCT ATGGAATGTAATAGTAGTAATATTGAGGAATACCCCTCCGGGGTTGGCCGTGGACCTCAC TCCGTAACGGGAAAAACCAAATTAATAAATATAAAATTACATAATGGTATATTAATACCA CATTTAAGACATGTACAATATGCATTGAATATGGGTGTTGGTACACCAAAACAAGAAATA AATCCAATAATAGATACGGGTAGTACAAATACTTGGGTAATATCACAAAATTGTATATCA AATACTTGTGAAGGTGTTGCATCATTTAATAGTAAAAAATCGGAAACTTTTAATCCTATA AATGAAGGATTAAAAATTAAATTTGGTACTGGTATTATTAAAGGTGTTTTAGGTATTGAT AATATTACTATTGGTAATGATATTATTAAACAACAAATTTTTGGTCTTGTTAATGAAGAA AATTCTAATATTTTTAATGTAATAAAATTTCAAGGTATAATTGGATTAGGATTTCCTAAA TTAGCATTTGATCATCATACATCACTTTATGATAATTATTCTAAACAAATTAATGCAGAT TTAATCTTTTCATTATATTTCTCAAATCAATATTCATATTTAATGATGGGTGGTATTGAT AAAAGATTTTATAAAGGAGATTTATATATGTTACCAGTAATTAGAGAATTATATTGGGAA ATTAAATTATATGAATTATGGATTGGTAATATTAAATTATGTTGTAATAATGAATCTTAT ATTATTTTCGATTCTGGTACTTCATTTAATACTATGCCACATACTGAATTTTTATTATTT AAACAATATATTAAACCCAAATATTGTAATGGATTAGAAAATATATATGAAGAATATCCA ATAATAAAATATAAATTAGAAGGTGGTATTGAAATAAATATAGAACCACAAGAATATATA TTTCTTCATAAAGATAAATGTCGTATTGCTTATATGCAAATTGATGTACCATCAAGTTAT GGACGTGCATTTATACTTGGTACACAAGCTTTTATGACACATTATTATACTGTTTATCAA AGACAACCACCTATGGTACGTTACGGTGCTTGCTCCAACAGCAACAGCACCAAAACGGGT TCACTAACTCCCCAAAGGGGCTTCTTAACCTCTGAGAGGGGTCTCTTTAGTTATACTAGT TATTTACCCTTAGTAGTTATATACCTACAGTATTTAGTTCTCTTTCCAGGGTCTATTTAG
Download Fasta

Fasta :-

MIKCIIIAIIIKLINTLPYCSDININKPCIYNGPIQKRIFVLKSLTPNENKTTEEINEEN WHNVNKGFIHYFYRSSVTGSGPTASNGPKEAVTEDSSTVGPNTVTEENTSTPGKGANSMP MECNSSNIEEYPSGVGRGPHSVTGKTKLINIKLHNGILIPHLRHVQYALNMGVGTPKQEI NPIIDTGSTNTWVISQNCISNTCEGVASFNSKKSETFNPINEGLKIKFGTGIIKGVLGID NITIGNDIIKQQIFGLVNEENSNIFNVIKFQGIIGLGFPKLAFDHHTSLYDNYSKQINAD LIFSLYFSNQYSYLMMGGIDKRFYKGDLYMLPVIRELYWEIKLYELWIGNIKLCCNNESY IIFDSGTSFNTMPHTEFLLFKQYIKPKYCNGLENIYEEYPIIKYKLEGGIEINIEPQEYI FLHKDKCRIAYMQIDVPSSYGRAFILGTQAFMTHYYTVYQRQPPMVRYGACSNSNSTKTG SLTPQRGFLTSERGLFSYTSYLPLVVIYLQYLVLFPGSI

No Results

title: catalytic residue
coordinates: D185,D364

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	TA02750	T	98	0.632	0.660	TA02750	T	105	0.618	0.070	TA02750	T	93	0.607	0.116	TA02750	T	103	0.591	0.021	TA02750	T	111	0.553	0.069	TA02750	S	97	0.550	0.021	TA02750	T	109	0.519	0.039	TA02750	S	96	0.517	0.031

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	TA02750	T	98	0.632	0.660	TA02750	T	105	0.618	0.070	TA02750	T	93	0.607	0.116	TA02750	T	103	0.591	0.021	TA02750	T	111	0.553	0.069	TA02750	S	97	0.550	0.021	TA02750	T	109	0.519	0.039	TA02750	S	96	0.517	0.031

	ID	Site	Peptide	Score	Method
	TA02750	439 S	DVPSSYGRA	0.994	unsp

TA02750 | pepsinogen, putative

ID's

UniProt_ID: Q4UHM4

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

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Curated_GO_Component_IDs:

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Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TA02750

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India