TA02980 | integral membrane protein (apical merozoite antigen), putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >TA02980 MKKIGLKIRAQKDKLNPVLGSNSDPSEEYDSFQQNVFTHQPTQLHKSHHYITHQKKTSQH IDDLNFYNGKFNQKSRIGPGKVVNNSRNLVEGETLSKDDNKTKSKIKSKTASILPRLLKS LSFLAVLGSINSFSLALEEPFTQHTSNRTPFEVSLIQSNSSLSPIHNSSTQNSSHHNGFS GSTVNNTSLIETRNNVLNRTLGRFGSFLQSGLISSRADKKKRSGMNRRGPKGKKGKGGED EEKRNKWTDFMAKFDIAKVHGSGVYVDLGESATVGSYDYRMPIGKCPVVGKAIILENGAD FLSSITHHDPKERGLGFPATKVASNSSKLDMENQLLSPISAQVLRSWNYKHESDLSNCAE YSRNIVPGSNRNSKYRYPFVYDESEKLCYILYSPMQYNQGVKYCDQDSPDEGTSSLACMY PDKSKEDSHLFYGTSGLHMDWPVVCPVYPIRDSIFGSYDDQKDECVPIEPIFEEEAEDYE ACAKIIFEYSPSDVDISTNNQKLSDVDLYKEAMNNGKLSTALSIMFAPRYSEDRPIYTKG VGINWATYSVEEKKCNILDVVPSCLIISNGHYALTSLSSPNEEDAINYPCDIVQGKGFLK NPNGGKKNAQEPPKEPEPEEPKKEGAENKPKEKGKSEKKNEKSMPSGPFTPYTSLKKEGF ECSKYTVERVNKSCGVYYECSETPVLFTKKNRIYLYIILAVSLVVLAVLAYFGYRYYSKN HLKKHNSQIYEDDNVNNYYNEDFDDEQDRDEYASNVRGDQIWSRHTPDRSEVTPVRISRL NH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA02980.fa Sequence name : TA02980 Sequence length : 782 VALUES OF COMPUTED PARAMETERS Coef20 : 3.498 CoefTot : -0.459 ChDiff : 1 ZoneTo : 12 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.188 2.912 0.503 0.922 MesoH : -0.262 0.202 -0.360 0.172 MuHd_075 : 29.890 16.711 9.488 5.054 MuHd_095 : 17.356 11.382 4.586 3.529 MuHd_100 : 28.416 19.068 7.336 6.020 MuHd_105 : 31.682 20.218 7.918 6.768 Hmax_075 : 8.750 8.633 -0.006 3.605 Hmax_095 : -0.200 6.900 -2.123 2.740 Hmax_100 : 2.100 11.500 -1.388 3.290 Hmax_105 : -5.862 6.650 -3.836 1.566 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9883 0.0117 DFMC : 0.9876 0.0124
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 782 TA02980 MKKIGLKIRAQKDKLNPVLGSNSDPSEEYDSFQQNVFTHQPTQLHKSHHYITHQKKTSQHIDDLNFYNGKFNQKSRIGPG 80 KVVNNSRNLVEGETLSKDDNKTKSKIKSKTASILPRLLKSLSFLAVLGSINSFSLALEEPFTQHTSNRTPFEVSLIQSNS 160 SLSPIHNSSTQNSSHHNGFSGSTVNNTSLIETRNNVLNRTLGRFGSFLQSGLISSRADKKKRSGMNRRGPKGKKGKGGED 240 EEKRNKWTDFMAKFDIAKVHGSGVYVDLGESATVGSYDYRMPIGKCPVVGKAIILENGADFLSSITHHDPKERGLGFPAT 320 KVASNSSKLDMENQLLSPISAQVLRSWNYKHESDLSNCAEYSRNIVPGSNRNSKYRYPFVYDESEKLCYILYSPMQYNQG 400 VKYCDQDSPDEGTSSLACMYPDKSKEDSHLFYGTSGLHMDWPVVCPVYPIRDSIFGSYDDQKDECVPIEPIFEEEAEDYE 480 ACAKIIFEYSPSDVDISTNNQKLSDVDLYKEAMNNGKLSTALSIMFAPRYSEDRPIYTKGVGINWATYSVEEKKCNILDV 560 VPSCLIISNGHYALTSLSSPNEEDAINYPCDIVQGKGFLKNPNGGKKNAQEPPKEPEPEEPKKEGAENKPKEKGKSEKKN 640 EKSMPSGPFTPYTSLKKEGFECSKYTVERVNKSCGVYYECSETPVLFTKKNRIYLYIILAVSLVVLAVLAYFGYRYYSKN 720 HLKKHNSQIYEDDNVNNYYNEDFDDEQDRDEYASNVRGDQIWSRHTPDRSEVTPVRISRLNH 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .............................................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA02980 2 -----MK|KI 0.077 . TA02980 3 ----MKK|IG 0.099 . TA02980 7 MKKIGLK|IR 0.057 . TA02980 9 KIGLKIR|AQ 0.117 . TA02980 12 LKIRAQK|DK 0.139 . TA02980 14 IRAQKDK|LN 0.076 . TA02980 46 QPTQLHK|SH 0.090 . TA02980 55 HYITHQK|KT 0.087 . TA02980 56 YITHQKK|TS 0.105 . TA02980 70 LNFYNGK|FN 0.072 . TA02980 74 NGKFNQK|SR 0.071 . TA02980 76 KFNQKSR|IG 0.095 . TA02980 81 SRIGPGK|VV 0.104 . TA02980 87 KVVNNSR|NL 0.104 . TA02980 97 EGETLSK|DD 0.058 . TA02980 101 LSKDDNK|TK 0.070 . TA02980 103 KDDNKTK|SK 0.100 . TA02980 105 DNKTKSK|IK 0.067 . TA02980 107 KTKSKIK|SK 0.085 . TA02980 109 KSKIKSK|TA 0.082 . TA02980 116 TASILPR|LL 0.094 . TA02980 119 ILPRLLK|SL 0.150 . TA02980 148 TQHTSNR|TP 0.104 . TA02980 193 TSLIETR|NN 0.076 . TA02980 199 RNNVLNR|TL 0.144 . TA02980 203 LNRTLGR|FG 0.107 . TA02980 216 SGLISSR|AD 0.088 . TA02980 219 ISSRADK|KK 0.157 . TA02980 220 SSRADKK|KR 0.105 . TA02980 221 SRADKKK|RS 0.218 . TA02980 222 RADKKKR|SG 0.288 . TA02980 227 KRSGMNR|RG 0.119 . TA02980 228 RSGMNRR|GP 0.155 . TA02980 231 MNRRGPK|GK 0.186 . TA02980 233 RRGPKGK|KG 0.109 . TA02980 234 RGPKGKK|GK 0.117 . TA02980 236 PKGKKGK|GG 0.100 . TA02980 243 GGEDEEK|RN 0.060 . TA02980 244 GEDEEKR|NK 0.156 . TA02980 246 DEEKRNK|WT 0.060 . TA02980 253 WTDFMAK|FD 0.077 . TA02980 258 AKFDIAK|VH 0.068 . TA02980 280 VGSYDYR|MP 0.098 . TA02980 285 YRMPIGK|CP 0.064 . TA02980 291 KCPVVGK|AI 0.069 . TA02980 311 ITHHDPK|ER 0.079 . TA02980 313 HHDPKER|GL 0.101 . TA02980 321 LGFPATK|VA 0.062 . TA02980 328 VASNSSK|LD 0.070 . TA02980 345 ISAQVLR|SW 0.168 . TA02980 350 LRSWNYK|HE 0.084 . TA02980 363 NCAEYSR|NI 0.081 . TA02980 371 IVPGSNR|NS 0.069 . TA02980 374 GSNRNSK|YR 0.165 . TA02980 376 NRNSKYR|YP 0.146 . TA02980 386 VYDESEK|LC 0.054 . TA02980 402 QYNQGVK|YC 0.068 . TA02980 423 ACMYPDK|SK 0.085 . TA02980 425 MYPDKSK|ED 0.064 . TA02980 451 CPVYPIR|DS 0.098 . TA02980 462 GSYDDQK|DE 0.067 . TA02980 484 DYEACAK|II 0.062 . TA02980 502 ISTNNQK|LS 0.061 . TA02980 510 SDVDLYK|EA 0.070 . TA02980 517 EAMNNGK|LS 0.062 . TA02980 529 SIMFAPR|YS 0.115 . TA02980 534 PRYSEDR|PI 0.121 . TA02980 539 DRPIYTK|GV 0.091 . TA02980 553 TYSVEEK|KC 0.065 . TA02980 554 YSVEEKK|CN 0.080 . TA02980 596 CDIVQGK|GF 0.071 . TA02980 600 QGKGFLK|NP 0.061 . TA02980 606 KNPNGGK|KN 0.062 . TA02980 607 NPNGGKK|NA 0.112 . TA02980 614 NAQEPPK|EP 0.078 . TA02980 622 PEPEEPK|KE 0.063 . TA02980 623 EPEEPKK|EG 0.093 . TA02980 629 KEGAENK|PK 0.084 . TA02980 631 GAENKPK|EK 0.086 . TA02980 633 ENKPKEK|GK 0.073 . TA02980 635 KPKEKGK|SE 0.139 . TA02980 638 EKGKSEK|KN 0.097 . TA02980 639 KGKSEKK|NE 0.075 . TA02980 642 SEKKNEK|SM 0.086 . TA02980 656 TPYTSLK|KE 0.069 . TA02980 657 PYTSLKK|EG 0.069 . TA02980 664 EGFECSK|YT 0.060 . TA02980 669 SKYTVER|VN 0.089 . TA02980 672 TVERVNK|SC 0.262 . TA02980 689 TPVLFTK|KN 0.071 . TA02980 690 PVLFTKK|NR 0.070 . TA02980 692 LFTKKNR|IY 0.089 . TA02980 715 LAYFGYR|YY 0.095 . TA02980 719 GYRYYSK|NH 0.061 . TA02980 723 YSKNHLK|KH 0.062 . TA02980 724 SKNHLKK|HN 0.207 . TA02980 749 FDDEQDR|DE 0.093 . TA02980 757 EYASNVR|GD 0.075 . TA02980 764 GDQIWSR|HT 0.089 . TA02980 769 SRHTPDR|SE 0.163 . TA02980 776 SEVTPVR|IS 0.072 . TA02980 779 TPVRISR|LN 0.271 . ____________________________^_________________

  • Fasta :-

    >TA02980 ATGAAAAAAATAGGACTTAAAATTAGGGCACAAAAGGATAAATTAAATCCTGTGTTAGGA AGCAACTCTGACCCTTCGGAAGAGTATGATTCATTCCAGCAAAATGTTTTCACTCATCAA CCAACCCAACTACACAAATCTCATCACTACATTACACACCAGAAAAAAACCAGCCAACAC ATCGACGATTTAAATTTTTATAATGGAAAATTTAATCAAAAGAGCAGAATTGGTCCAGGG AAGGTAGTAAATAACAGTAGGAATCTGGTAGAAGGTGAAACACTATCTAAGGATGACAAT AAAACAAAATCTAAAATAAAGTCAAAAACAGCATCAATTTTACCTAGACTTTTAAAATCT TTATCATTTTTAGCTGTTTTAGGGTCAATTAATTCATTTTCATTAGCATTAGAGGAACCT TTTACTCAACACACTTCTAACCGAACGCCCTTTGAAGTATCATTAATTCAAAGCAACAGC AGTTTATCGCCTATTCATAATTCTTCAACTCAAAATTCAAGTCATCACAACGGTTTTAGT GGTAGTACCGTTAATAATACCTCATTAATAGAGACAAGGAATAACGTATTAAACAGAACA CTAGGTAGATTCGGATCATTTTTGCAATCAGGATTGATAAGCAGTAGAGCAGACAAAAAG AAGCGGTCTGGTATGAATAGAAGAGGCCCTAAGGGGAAGAAAGGGAAGGGAGGAGAAGAC GAAGAAAAGAGGAACAAGTGGACCGATTTCATGGCAAAGTTTGATATCGCTAAGGTCCAC GGTTCAGGGGTTTACGTAGATTTGGGTGAATCTGCCACCGTTGGCAGTTATGACTACAGG ATGCCTATAGGAAAATGTCCAGTTGTAGGTAAGGCAATCATACTCGAGAATGGAGCTGAT TTTTTGAGCAGCATAACCCATCATGACCCCAAGGAGAGAGGGCTGGGGTTCCCTGCTACA AAAGTTGCCTCAAATTCATCAAAACTGGACATGGAGAACCAGCTCTTATCACCAATTAGT GCTCAGGTCCTAAGGAGCTGGAATTATAAACACGAATCAGATTTAAGTAATTGTGCTGAG TATTCGAGAAACATTGTTCCGGGCAGTAATCGTAATTCAAAGTATCGTTACCCGTTTGTA TATGATGAGTCTGAGAAGCTTTGTTATATTTTATATAGTCCCATGCAATATAATCAGGGC GTAAAGTACTGTGACCAAGACTCTCCGGACGAAGGAACTAGCAGTTTAGCTTGTATGTAC CCGGATAAGAGCAAGGAGGATTCACACCTATTTTACGGAACCAGCGGTCTTCACATGGAC TGGCCTGTAGTTTGCCCAGTTTACCCTATTAGAGATTCGATTTTTGGATCCTACGACGAC CAAAAGGACGAATGTGTTCCAATTGAGCCGATATTTGAGGAGGAGGCTGAAGATTATGAG GCATGTGCCAAGATAATTTTCGAGTATTCTCCAAGTGATGTTGATATTAGCACAAATAAC CAGAAGCTTTCAGACGTCGACCTTTACAAGGAGGCGATGAATAATGGAAAGCTGAGCACT GCTCTTTCAATTATGTTTGCTCCTAGGTACTCTGAGGATCGTCCGATCTATACTAAAGGT GTCGGTATAAACTGGGCTACATACTCCGTCGAGGAAAAGAAATGTAACATTCTCGACGTT GTTCCCAGCTGTCTTATTATAAGTAACGGCCACTATGCCCTTACAAGTCTCAGCTCACCC AATGAAGAGGATGCTATAAATTACCCCTGCGATATCGTTCAGGGCAAGGGGTTTTTGAAG AACCCAAACGGTGGAAAAAAGAATGCTCAGGAACCGCCCAAGGAACCTGAACCTGAAGAA CCTAAGAAGGAGGGTGCTGAAAACAAACCCAAAGAGAAAGGTAAATCTGAGAAAAAGAAT GAAAAATCTATGCCTTCAGGACCATTCACGCCATACACTAGCTTGAAGAAGGAGGGTTTC GAGTGCAGTAAATACACTGTTGAGCGGGTGAACAAAAGCTGCGGCGTTTACTATGAATGC TCAGAAACGCCTGTATTATTTACCAAGAAGAATAGGATTTATCTATACATCATATTGGCA GTATCGCTTGTAGTACTGGCCGTCTTAGCCTACTTTGGATACAGGTACTACAGTAAGAAT CACTTGAAAAAACACAATTCCCAGATATATGAAGATGATAACGTGAACAACTACTACAAT GAGGACTTTGATGACGAACAAGATCGGGATGAATACGCTTCGAATGTTAGAGGTGATCAA ATCTGGAGCAGACACACTCCAGACAGATCTGAAGTTACTCCAGTCAGAATCTCTAGGTTA AACCATTAA
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA02980188 SVNNTSLIET0.994unspTA02980188 SVNNTSLIET0.994unspTA02980188 SVNNTSLIET0.994unspTA02980373 SSNRNSKYRY0.994unspTA02980408 SCDQDSPDEG0.994unspTA02980424 SYPDKSKEDS0.998unspTA02980490 SIFEYSPSDV0.994unspTA02980579 STSLSSPNEE0.992unspTA02980636 SEKGKSEKKN0.997unspTA0298026 SNSDPSEEYD0.993unspTA02980163 SNSSLSPIHN0.993unsp

TA02980      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India