TA03560 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA03560mTP0.1485490.0000050.851447CS pos: 35-36. RNH-TS. Pr: 0.3358
No Results

  • Fasta :-

    >TA03560 MLKCFCRGSLANLRNNVRVPTKLRINKFSTSNRNHTSYDKDEFRRFSRGEVERLPFSDPY FEHLEANYLEAPLDLNTSSVSESPLLTRNNVGLGFLILNSEYIGSKCVSNLYRELLELEN NVYKRFVVLTSMSRNVFSKGLDPSELHLFHDSILKLSSLKETPLKKNPDFKLDLINLNLE RFKKALEEYVKNVLQLLYIIKTYRKPLIIYGNGQMESFGSNLCFISSFSSCYKHSTYQAN TDQTLFNNFGSTFVLSNLRGNLGKYLLLTNDLLVGKDLIWSGLAKKFIEPSSINNIQIIS DRLVELPEKYVESYINEFNINLSSPDFKLKNYESVINEHFKHDNIRDIVASLKNSFNKAK SKNVNDSDIPNFEQTILENMPKSSDTNSSGVNVLDGMLEIIKKLKVTKYKILSDLKIGVN EWSSMVNLSYKSTSTIKQENAKLLYNLIMEILLIESLKLESKLFFKSFRMDVDFSSVFDS LFDRSTSSYSGHESGNVKDALACMKQFLNIK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA03560.fa Sequence name : TA03560 Sequence length : 511 VALUES OF COMPUTED PARAMETERS Coef20 : 4.557 CoefTot : -0.290 ChDiff : 8 ZoneTo : 38 KR : 8 DE : 0 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.500 0.096 0.521 MesoH : -0.307 0.241 -0.357 0.188 MuHd_075 : 28.996 10.682 7.578 4.587 MuHd_095 : 46.138 23.826 9.737 9.916 MuHd_100 : 40.629 18.942 10.391 8.950 MuHd_105 : 33.465 21.265 9.185 7.873 Hmax_075 : 4.550 10.000 -1.995 0.060 Hmax_095 : 18.113 19.250 4.235 5.556 Hmax_100 : 9.700 11.200 3.120 3.830 Hmax_105 : 6.600 6.500 -0.322 3.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0403 0.9597 DFMC : 0.0565 0.9435 This protein is probably imported in mitochondria. f(Ser) = 0.1053 f(Arg) = 0.1316 CMi = 0.41408 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 511 TA03560 MLKCFCRGSLANLRNNVRVPTKLRINKFSTSNRNHTSYDKDEFRRFSRGEVERLPFSDPYFEHLEANYLEAPLDLNTSSV 80 SESPLLTRNNVGLGFLILNSEYIGSKCVSNLYRELLELENNVYKRFVVLTSMSRNVFSKGLDPSELHLFHDSILKLSSLK 160 ETPLKKNPDFKLDLINLNLERFKKALEEYVKNVLQLLYIIKTYRKPLIIYGNGQMESFGSNLCFISSFSSCYKHSTYQAN 240 TDQTLFNNFGSTFVLSNLRGNLGKYLLLTNDLLVGKDLIWSGLAKKFIEPSSINNIQIISDRLVELPEKYVESYINEFNI 320 NLSSPDFKLKNYESVINEHFKHDNIRDIVASLKNSFNKAKSKNVNDSDIPNFEQTILENMPKSSDTNSSGVNVLDGMLEI 400 IKKLKVTKYKILSDLKIGVNEWSSMVNLSYKSTSTIKQENAKLLYNLIMEILLIESLKLESKLFFKSFRMDVDFSSVFDS 480 LFDRSTSSYSGHESGNVKDALACMKQFLNIK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA03560 3 ----MLK|CF 0.061 . TA03560 7 MLKCFCR|GS 0.104 . TA03560 14 GSLANLR|NN 0.071 . TA03560 18 NLRNNVR|VP 0.074 . TA03560 22 NVRVPTK|LR 0.065 . TA03560 24 RVPTKLR|IN 0.073 . TA03560 27 TKLRINK|FS 0.155 . TA03560 33 KFSTSNR|NH 0.097 . TA03560 40 NHTSYDK|DE 0.058 . TA03560 44 YDKDEFR|RF 0.105 . TA03560 45 DKDEFRR|FS 0.176 . TA03560 48 EFRRFSR|GE 0.208 . TA03560 53 SRGEVER|LP 0.085 . TA03560 88 ESPLLTR|NN 0.072 . TA03560 106 SEYIGSK|CV 0.071 . TA03560 113 CVSNLYR|EL 0.110 . TA03560 124 LENNVYK|RF 0.062 . TA03560 125 ENNVYKR|FV 0.291 . TA03560 134 VLTSMSR|NV 0.086 . TA03560 139 SRNVFSK|GL 0.161 . TA03560 155 FHDSILK|LS 0.056 . TA03560 160 LKLSSLK|ET 0.054 . TA03560 165 LKETPLK|KN 0.059 . TA03560 166 KETPLKK|NP 0.087 . TA03560 171 KKNPDFK|LD 0.068 . TA03560 181 INLNLER|FK 0.089 . TA03560 183 LNLERFK|KA 0.060 . TA03560 184 NLERFKK|AL 0.387 . TA03560 191 ALEEYVK|NV 0.067 . TA03560 201 QLLYIIK|TY 0.059 . TA03560 204 YIIKTYR|KP 0.074 . TA03560 205 IIKTYRK|PL 0.084 . TA03560 233 SFSSCYK|HS 0.074 . TA03560 259 FVLSNLR|GN 0.063 . TA03560 264 LRGNLGK|YL 0.069 . TA03560 276 NDLLVGK|DL 0.071 . TA03560 285 IWSGLAK|KF 0.062 . TA03560 286 WSGLAKK|FI 0.121 . TA03560 302 IQIISDR|LV 0.120 . TA03560 309 LVELPEK|YV 0.080 . TA03560 328 LSSPDFK|LK 0.065 . TA03560 330 SPDFKLK|NY 0.083 . TA03560 341 VINEHFK|HD 0.069 . TA03560 346 FKHDNIR|DI 0.171 . TA03560 353 DIVASLK|NS 0.059 . TA03560 358 LKNSFNK|AK 0.091 . TA03560 360 NSFNKAK|SK 0.099 . TA03560 362 FNKAKSK|NV 0.086 . TA03560 382 ILENMPK|SS 0.093 . TA03560 402 GMLEIIK|KL 0.053 . TA03560 403 MLEIIKK|LK 0.086 . TA03560 405 EIIKKLK|VT 0.061 . TA03560 408 KKLKVTK|YK 0.065 . TA03560 410 LKVTKYK|IL 0.083 . TA03560 416 KILSDLK|IG 0.051 . TA03560 431 MVNLSYK|ST 0.117 . TA03560 437 KSTSTIK|QE 0.062 . TA03560 442 IKQENAK|LL 0.070 . TA03560 458 LLIESLK|LE 0.064 . TA03560 462 SLKLESK|LF 0.065 . TA03560 466 ESKLFFK|SF 0.076 . TA03560 469 LFFKSFR|MD 0.084 . TA03560 484 FDSLFDR|ST 0.174 . TA03560 498 HESGNVK|DA 0.098 . TA03560 505 DALACMK|QF 0.060 . TA03560 511 KQFLNIK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >TA03560 ATGCTTAAATGTTTTTGTAGAGGATCTCTGGCAAATTTAAGAAATAATGTAAGAGTTCCT ACAAAATTAAGAATAAATAAATTCTCAACCTCTAATAGAAACCATACAAGTTATGATAAA GATGAATTCCGGAGATTTTCAAGGGGAGAAGTCGAGCGATTACCGTTTTCTGATCCTTAT TTCGAGCACCTGGAAGCCAACTATTTGGAAGCTCCACTGGATTTGAATACAAGTTCTGTA TCAGAATCACCTTTACTTACTAGAAATAACGTAGGATTAGGGTTTTTAATACTCAATAGT GAATATATTGGAAGTAAATGCGTTTCTAATTTATATCGAGAGTTGCTTGAATTAGAGAAT AATGTGTACAAAAGATTTGTTGTTCTCACCTCTATGAGCAGAAATGTATTTTCTAAAGGA CTAGATCCCTCAGAACTCCATCTGTTCCATGATTCGATCCTTAAATTATCAAGCTTAAAG GAAACACCCTTAAAGAAAAATCCAGATTTTAAATTGGATTTGATAAATTTAAACTTGGAG CGTTTTAAAAAGGCTCTCGAAGAGTATGTTAAAAATGTATTACAACTTTTGTACATTATT AAGACGTACCGGAAACCCCTAATTATATATGGCAATGGCCAAATGGAATCTTTTGGTTCA AACTTGTGCTTTATATCCTCCTTTTCATCGTGTTACAAACACTCAACATATCAAGCGAAC ACAGATCAAACGCTTTTTAATAACTTCGGATCGACTTTTGTGTTATCCAACTTGAGAGGA AACTTGGGCAAATACTTGTTGTTGACCAACGATTTGTTGGTCGGGAAGGATTTAATCTGG TCAGGCCTGGCCAAAAAGTTCATCGAACCCAGTTCCATCAACAACATCCAAATTATCTCA GACAGATTGGTTGAATTGCCCGAAAAATATGTTGAAAGCTACATAAACGAGTTTAACATA AACTTGAGTTCGCCAGATTTTAAGCTCAAGAATTACGAAAGTGTCATTAATGAACACTTC AAACATGATAACATCAGGGATATCGTAGCCAGTCTCAAAAACTCCTTCAATAAAGCTAAA AGCAAGAATGTAAACGATTCAGATATTCCAAATTTCGAGCAAACAATTCTAGAGAATATG CCAAAGTCAAGTGACACCAACTCTAGTGGTGTCAATGTTCTGGATGGTATGCTTGAAATT ATCAAAAAACTAAAGGTGACCAAGTATAAAATACTCTCCGATCTGAAGATAGGCGTGAAT GAGTGGTCGAGCATGGTAAACTTGTCCTACAAGAGCACCAGTACCATAAAGCAGGAGAAC GCAAAGCTGCTGTACAACTTGATCATGGAGATTCTCCTAATAGAGTCCCTAAAGCTGGAA TCGAAGTTGTTTTTCAAGTCTTTTAGGATGGATGTGGACTTTTCCTCAGTTTTTGACTCC TTATTTGACAGGAGCACAAGCAGTTACAGCGGGCACGAGTCTGGGAATGTAAAGGATGCT TTGGCATGCATGAAGCAGTTTTTAAATATAAAATAG
  • Download Fasta

  • Fasta :-

    MLKCFCRGSLANLRNNVRVPTKLRINKFSTSNRNHTSYDKDEFRRFSRGEVERLPFSDPY FEHLEANYLEAPLDLNTSSVSESPLLTRNNVGLGFLILNSEYIGSKCVSNLYRELLELEN NVYKRFVVLTSMSRNVFSKGLDPSELHLFHDSILKLSSLKETPLKKNPDFKLDLINLNLE RFKKALEEYVKNVLQLLYIIKTYRKPLIIYGNGQMESFGSNLCFISSFSSCYKHSTYQAN TDQTLFNNFGSTFVLSNLRGNLGKYLLLTNDLLVGKDLIWSGLAKKFIEPSSINNIQIIS DRLVELPEKYVESYINEFNINLSSPDFKLKNYESVINEHFKHDNIRDIVASLKNSFNKAK SKNVNDSDIPNFEQTILENMPKSSDTNSSGVNVLDGMLEIIKKLKVTKYKILSDLKIGVN EWSSMVNLSYKSTSTIKQENAKLLYNLIMEILLIESLKLESKLFFKSFRMDVDFSSVFDS LFDRSTSSYSGHESGNVKDALACMKQFLNIK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA03560429 SMVNLSYKST0.992unspTA03560429 SMVNLSYKST0.992unspTA03560429 SMVNLSYKST0.992unspTA03560434 SYKSTSTIKQ0.993unspTA03560487 SDRSTSSYSG0.993unspTA03560490 STSSYSGHES0.994unspTA0356047 SFRRFSRGEV0.997unspTA03560158 SLKLSSLKET0.998unsp

TA03560      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India