TA04050 | hypothetical protein, conserved

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TA04050OTHER0.9999690.0000300.000001
No Results

  • Fasta :-

    >TA04050 MSDPNPSSLCYHCTVRECEKVCYKDKNVKASEKNDFGDSKPLKDSLYASYLKAMAIKTIL SASFSDFVNYFANSVEDDVSLDEKNAFQLKYSGFPENLSRCDSCLCYFSTRAFCHCKDCS SGDENHYVILMHGILSTPLMMTDLCKALLEAYPSLFVYFPVSACKKTLLGTSYVLNLLID ELKRLFSKIPNHFKLSLIGHSYGGILLRYFLMYYLLNKQNSAGITSNTLNSTQHITDYSF KSSDSNTTCYNDELDQDCTFFSKDIVWKNFIFVATPLVGTFENNSELKRLANLIGSDTIS ELDNKTIDLLFLLKGEGFLNRFEKVVAYGNISGDMMVAPRTSLILPNYLVNEEKLREIAN VLYKYPGQPANIKMNNNNFHLIFNDVTKVLQNSNPHSPDNSYATKLTSRFNELVDAKINN TKHMKFIEDMLNGRPVFSDEDKMRFSTVITDIVSNGNVDELEKFDDDDYLYNQILMGLLS KLKILKFAVYIPRIHFPHRSIITYQSPISNDTYTYQILENMVNIFET
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA04050.fa Sequence name : TA04050 Sequence length : 527 VALUES OF COMPUTED PARAMETERS Coef20 : 3.490 CoefTot : -0.681 ChDiff : -9 ZoneTo : 16 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.441 1.441 0.127 0.615 MesoH : 0.003 0.713 -0.161 0.313 MuHd_075 : 24.968 16.869 8.527 4.631 MuHd_095 : 9.801 5.680 6.284 2.033 MuHd_100 : 14.770 4.297 4.756 2.666 MuHd_105 : 20.734 5.719 3.763 3.377 Hmax_075 : 9.800 9.567 4.179 2.683 Hmax_095 : 1.925 4.112 2.578 0.980 Hmax_100 : 8.300 4.100 1.588 2.050 Hmax_105 : 8.313 2.975 1.317 1.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9886 0.0114 DFMC : 0.9490 0.0510
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 527 TA04050 MSDPNPSSLCYHCTVRECEKVCYKDKNVKASEKNDFGDSKPLKDSLYASYLKAMAIKTILSASFSDFVNYFANSVEDDVS 80 LDEKNAFQLKYSGFPENLSRCDSCLCYFSTRAFCHCKDCSSGDENHYVILMHGILSTPLMMTDLCKALLEAYPSLFVYFP 160 VSACKKTLLGTSYVLNLLIDELKRLFSKIPNHFKLSLIGHSYGGILLRYFLMYYLLNKQNSAGITSNTLNSTQHITDYSF 240 KSSDSNTTCYNDELDQDCTFFSKDIVWKNFIFVATPLVGTFENNSELKRLANLIGSDTISELDNKTIDLLFLLKGEGFLN 320 RFEKVVAYGNISGDMMVAPRTSLILPNYLVNEEKLREIANVLYKYPGQPANIKMNNNNFHLIFNDVTKVLQNSNPHSPDN 400 SYATKLTSRFNELVDAKINNTKHMKFIEDMLNGRPVFSDEDKMRFSTVITDIVSNGNVDELEKFDDDDYLYNQILMGLLS 480 KLKILKFAVYIPRIHFPHRSIITYQSPISNDTYTYQILENMVNIFET 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA04050 16 CYHCTVR|EC 0.090 . TA04050 20 TVRECEK|VC 0.059 . TA04050 24 CEKVCYK|DK 0.066 . TA04050 26 KVCYKDK|NV 0.094 . TA04050 29 YKDKNVK|AS 0.066 . TA04050 33 NVKASEK|ND 0.057 . TA04050 40 NDFGDSK|PL 0.072 . TA04050 43 GDSKPLK|DS 0.071 . TA04050 52 LYASYLK|AM 0.055 . TA04050 57 LKAMAIK|TI 0.066 . TA04050 84 DVSLDEK|NA 0.070 . TA04050 90 KNAFQLK|YS 0.078 . TA04050 100 FPENLSR|CD 0.076 . TA04050 111 LCYFSTR|AF 0.097 . TA04050 117 RAFCHCK|DC 0.090 . TA04050 146 MMTDLCK|AL 0.066 . TA04050 165 FPVSACK|KT 0.059 . TA04050 166 PVSACKK|TL 0.081 . TA04050 183 LLIDELK|RL 0.064 . TA04050 184 LIDELKR|LF 0.181 . TA04050 188 LKRLFSK|IP 0.062 . TA04050 194 KIPNHFK|LS 0.060 . TA04050 208 YGGILLR|YF 0.075 . TA04050 218 MYYLLNK|QN 0.074 . TA04050 241 ITDYSFK|SS 0.092 . TA04050 263 DCTFFSK|DI 0.068 . TA04050 268 SKDIVWK|NF 0.064 . TA04050 288 ENNSELK|RL 0.062 . TA04050 289 NNSELKR|LA 0.203 . TA04050 305 ISELDNK|TI 0.057 . TA04050 314 DLLFLLK|GE 0.057 . TA04050 321 GEGFLNR|FE 0.090 . TA04050 324 FLNRFEK|VV 0.230 . TA04050 340 DMMVAPR|TS 0.075 . TA04050 354 YLVNEEK|LR 0.061 . TA04050 356 VNEEKLR|EI 0.089 . TA04050 364 IANVLYK|YP 0.076 . TA04050 373 GQPANIK|MN 0.064 . TA04050 388 IFNDVTK|VL 0.072 . TA04050 405 DNSYATK|LT 0.075 . TA04050 409 ATKLTSR|FN 0.086 . TA04050 417 NELVDAK|IN 0.062 . TA04050 422 AKINNTK|HM 0.074 . TA04050 425 NNTKHMK|FI 0.100 . TA04050 434 EDMLNGR|PV 0.105 . TA04050 442 VFSDEDK|MR 0.064 . TA04050 444 SDEDKMR|FS 0.154 . TA04050 463 NVDELEK|FD 0.056 . TA04050 481 LMGLLSK|LK 0.056 . TA04050 483 GLLSKLK|IL 0.057 . TA04050 486 SKLKILK|FA 0.070 . TA04050 493 FAVYIPR|IH 0.089 . TA04050 499 RIHFPHR|SI 0.232 . ____________________________^_________________

  • Fasta :-

    >TA04050 ATGAGTGACCCAAACCCATCGTCACTCTGTTATCATTGTACTGTACGTGAATGCGAAAAG GTTTGTTACAAAGATAAAAACGTTAAAGCTTCCGAGAAAAATGATTTTGGTGATTCAAAA CCACTCAAGGATTCATTGTATGCCTCCTATCTCAAGGCAATGGCAATCAAAACCATCCTA TCAGCATCATTCTCAGACTTCGTGAACTACTTTGCCAATTCTGTGGAAGATGATGTGAGC CTGGATGAAAAAAATGCCTTCCAACTAAAGTATTCTGGATTCCCTGAAAACCTCTCACGC TGCGATAGCTGTTTGTGTTATTTCTCCACCCGTGCCTTTTGCCACTGCAAGGACTGCTCA AGCGGAGATGAAAACCACTATGTGATTTTGATGCACGGAATTCTATCGACGCCACTCATG ATGACTGATTTGTGCAAAGCACTGCTGGAGGCGTATCCCAGCTTGTTTGTTTACTTTCCA GTATCAGCGTGCAAAAAAACTCTGCTCGGAACTTCATACGTGCTCAACCTGCTAATTGAT GAGCTCAAGAGGTTGTTTTCCAAAATACCTAACCATTTCAAACTGAGCCTGATAGGCCAC TCATACGGTGGCATACTCCTGAGATATTTTTTAATGTACTATTTATTAAATAAACAAAAC TCCGCTGGAATAACTTCCAATACACTGAATTCTACGCAACATATCACTGATTATAGTTTT AAGTCCTCCGACTCCAACACCACCTGTTATAATGACGAGTTGGACCAAGATTGTACCTTT TTTAGTAAAGATATTGTCTGGAAAAACTTTATTTTCGTAGCGACGCCTCTGGTTGGAACG TTTGAAAACAATTCTGAGTTAAAGAGACTGGCGAACCTGATTGGGTCCGACACCATCTCG GAGCTGGACAACAAAACAATCGATCTTCTATTTTTGCTGAAGGGCGAGGGTTTTTTAAAC AGATTTGAAAAGGTCGTGGCGTACGGAAACATTTCAGGGGATATGATGGTAGCACCGAGG ACCTCTCTGATTTTGCCAAACTATCTGGTCAACGAAGAGAAGTTGCGTGAAATAGCAAAT GTTCTGTACAAATACCCGGGACAGCCTGCGAACATTAAGATGAATAACAATAACTTTCAC CTAATATTCAACGATGTCACCAAAGTTCTGCAAAACAGTAACCCTCATTCCCCAGATAAT TCCTACGCAACTAAATTAACCAGCAGATTTAACGAGCTTGTGGACGCCAAGATTAACAAC ACCAAGCATATGAAATTTATTGAGGATATGCTGAACGGTAGGCCTGTATTCAGCGATGAA GACAAAATGAGATTTAGCACGGTAATCACCGATATTGTCAGCAATGGTAACGTGGACGAG CTTGAGAAGTTTGACGATGACGACTATCTCTATAACCAGATTTTGATGGGTCTGCTAAGC AAGTTAAAGATTTTAAAATTCGCTGTATATATTCCCAGAATTCATTTTCCGCACCGATCG ATAATAACTTACCAGTCTCCTATTTCAAACGACACTTACACCTATCAAATACTAGAAAAC ATGGTCAATATATTTGAAACGTAG
  • Download Fasta

  • Fasta :-

    MSDPNPSSLCYHCTVRECEKVCYKDKNVKASEKNDFGDSKPLKDSLYASYLKAMAIKTIL SASFSDFVNYFANSVEDDVSLDEKNAFQLKYSGFPENLSRCDSCLCYFSTRAFCHCKDCS SGDENHYVILMHGILSTPLMMTDLCKALLEAYPSLFVYFPVSACKKTLLGTSYVLNLLID ELKRLFSKIPNHFKLSLIGHSYGGILLRYFLMYYLLNKQNSAGITSNTLNSTQHITDYSF KSSDSNTTCYNDELDQDCTFFSKDIVWKNFIFVATPLVGTFENNSELKRLANLIGSDTIS ELDNKTIDLLFLLKGEGFLNRFEKVVAYGNISGDMMVAPRTSLILPNYLVNEEKLREIAN VLYKYPGQPANIKMNNNNFHLIFNDVTKVLQNSNPHSPDNSYATKLTSRFNELVDAKINN TKHMKFIEDMLNGRPVFSDEDKMRFSTVITDIVSNGNVDELEKFDDDDYLYNQILMGLLS KLKILKFAVYIPRIHFPHRSIITYQSPISNDTYTYQILENMVNIFET

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0405074 SYFANSVEDD0.996unspTA0405074 SYFANSVEDD0.996unspTA0405074 SYFANSVEDD0.996unspTA04050438 SRPVFSDEDK0.995unspTA0405031 SNVKASEKND0.996unspTA0405063 SILSASFSDF0.991unsp

TA04050      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India