TA05020 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003677      

  • Computed_GO_Functions:  DNA binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >TA05020 MSSDFGGFDLHIQALEEWYKILTKGLKGDISPIKHKDLPKNKEKYNKTIESYKEKCLALC FVVNVSFINSVTESALFKSLCVSFFDKYYNDQYEPFLIFKFLTSNFKPTVEYSYIKMSSL KKGEYLFRLLRYYQNQIYYFRALQKFKAHYDIITMGIWCEFFDTKDRFWKYVDFSEPKFD NSAYSYSGSPRSNDKSYLSRPVKKLKDKNVNSNILSNDREIPFENNSESSYKGYLYIQRG RKMFIYSKNNRLEVKAIVLFPEYNYKTSRMLYVKEFPFELVNTAHSLKVSIANSNSGVTG SDKNLFILSCNICGIVSEITPKYVQECLLYQRKRSFIQWFEQFLQSINQRRISGLTSSFD KSGLNALNLAERLDVHLINANMLEKVDAKLIKTLTKTYPLPTKKAHFTNHPIYVLKSQIK KGVLSEGPPLTTFGNDLVYLRESLVEIKTKLGWYKENRRVIPDSKPIRTTESTHKIYEYY SFDQTEELKQEHIDEIDKFTINLSGNRHVPKNSVYIKSEYYENLEKILKRNRIFFKRAFS SLRYEGGTLKPKIDGVLISPSGLESFLKLYNEYVELISKNELFEDLEIAKFWKTVFKRLL NAPPVNKPQRYYAICSKINAETDEFLNQLN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA05020.fa Sequence name : TA05020 Sequence length : 630 VALUES OF COMPUTED PARAMETERS Coef20 : 3.121 CoefTot : 0.224 ChDiff : 25 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.465 1.882 0.326 0.566 MesoH : -0.488 0.340 -0.364 0.213 MuHd_075 : 14.746 12.166 4.104 2.754 MuHd_095 : 16.944 6.974 3.656 2.314 MuHd_100 : 15.807 11.812 2.536 3.839 MuHd_105 : 20.890 14.535 3.487 5.027 Hmax_075 : 17.850 15.983 2.609 5.997 Hmax_095 : 7.700 8.800 -1.181 3.900 Hmax_100 : 4.500 9.100 -1.908 4.240 Hmax_105 : 8.100 11.500 0.162 4.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9877 0.0123 DFMC : 0.9910 0.0090
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 630 TA05020 MSSDFGGFDLHIQALEEWYKILTKGLKGDISPIKHKDLPKNKEKYNKTIESYKEKCLALCFVVNVSFINSVTESALFKSL 80 CVSFFDKYYNDQYEPFLIFKFLTSNFKPTVEYSYIKMSSLKKGEYLFRLLRYYQNQIYYFRALQKFKAHYDIITMGIWCE 160 FFDTKDRFWKYVDFSEPKFDNSAYSYSGSPRSNDKSYLSRPVKKLKDKNVNSNILSNDREIPFENNSESSYKGYLYIQRG 240 RKMFIYSKNNRLEVKAIVLFPEYNYKTSRMLYVKEFPFELVNTAHSLKVSIANSNSGVTGSDKNLFILSCNICGIVSEIT 320 PKYVQECLLYQRKRSFIQWFEQFLQSINQRRISGLTSSFDKSGLNALNLAERLDVHLINANMLEKVDAKLIKTLTKTYPL 400 PTKKAHFTNHPIYVLKSQIKKGVLSEGPPLTTFGNDLVYLRESLVEIKTKLGWYKENRRVIPDSKPIRTTESTHKIYEYY 480 SFDQTEELKQEHIDEIDKFTINLSGNRHVPKNSVYIKSEYYENLEKILKRNRIFFKRAFSSLRYEGGTLKPKIDGVLISP 560 SGLESFLKLYNEYVELISKNELFEDLEIAKFWKTVFKRLLNAPPVNKPQRYYAICSKINAETDEFLNQLN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA05020 20 ALEEWYK|IL 0.074 . TA05020 24 WYKILTK|GL 0.061 . TA05020 27 ILTKGLK|GD 0.058 . TA05020 34 GDISPIK|HK 0.061 . TA05020 36 ISPIKHK|DL 0.073 . TA05020 40 KHKDLPK|NK 0.074 . TA05020 42 KDLPKNK|EK 0.061 . TA05020 44 LPKNKEK|YN 0.087 . TA05020 47 NKEKYNK|TI 0.070 . TA05020 53 KTIESYK|EK 0.066 . TA05020 55 IESYKEK|CL 0.072 . TA05020 78 TESALFK|SL 0.118 . TA05020 87 CVSFFDK|YY 0.080 . TA05020 100 EPFLIFK|FL 0.067 . TA05020 107 FLTSNFK|PT 0.054 . TA05020 116 VEYSYIK|MS 0.061 . TA05020 121 IKMSSLK|KG 0.063 . TA05020 122 KMSSLKK|GE 0.084 . TA05020 128 KGEYLFR|LL 0.095 . TA05020 131 YLFRLLR|YY 0.193 . TA05020 141 NQIYYFR|AL 0.086 . TA05020 145 YFRALQK|FK 0.067 . TA05020 147 RALQKFK|AH 0.083 . TA05020 165 CEFFDTK|DR 0.071 . TA05020 167 FFDTKDR|FW 0.094 . TA05020 170 TKDRFWK|YV 0.456 . TA05020 178 VDFSEPK|FD 0.062 . TA05020 191 SYSGSPR|SN 0.322 . TA05020 195 SPRSNDK|SY 0.071 . TA05020 200 DKSYLSR|PV 0.123 . TA05020 203 YLSRPVK|KL 0.158 . TA05020 204 LSRPVKK|LK 0.147 . TA05020 206 RPVKKLK|DK 0.077 . TA05020 208 VKKLKDK|NV 0.078 . TA05020 219 NILSNDR|EI 0.070 . TA05020 232 NSESSYK|GY 0.076 . TA05020 239 GYLYIQR|GR 0.071 . TA05020 241 LYIQRGR|KM 0.072 . TA05020 242 YIQRGRK|MF 0.192 . TA05020 248 KMFIYSK|NN 0.058 . TA05020 251 IYSKNNR|LE 0.086 . TA05020 255 NNRLEVK|AI 0.062 . TA05020 266 FPEYNYK|TS 0.059 . TA05020 269 YNYKTSR|ML 0.114 . TA05020 274 SRMLYVK|EF 0.064 . TA05020 288 NTAHSLK|VS 0.062 . TA05020 303 GVTGSDK|NL 0.058 . TA05020 322 VSEITPK|YV 0.083 . TA05020 332 ECLLYQR|KR 0.070 . TA05020 333 CLLYQRK|RS 0.074 . TA05020 334 LLYQRKR|SF 0.428 . TA05020 350 LQSINQR|RI 0.127 . TA05020 351 QSINQRR|IS 0.127 . TA05020 361 LTSSFDK|SG 0.084 . TA05020 372 ALNLAER|LD 0.073 . TA05020 385 NANMLEK|VD 0.061 . TA05020 389 LEKVDAK|LI 0.068 . TA05020 392 VDAKLIK|TL 0.069 . TA05020 396 LIKTLTK|TY 0.056 . TA05020 403 TYPLPTK|KA 0.065 . TA05020 404 YPLPTKK|AH 0.093 . TA05020 416 HPIYVLK|SQ 0.094 . TA05020 420 VLKSQIK|KG 0.058 . TA05020 421 LKSQIKK|GV 0.178 . TA05020 441 NDLVYLR|ES 0.072 . TA05020 448 ESLVEIK|TK 0.054 . TA05020 450 LVEIKTK|LG 0.066 . TA05020 455 TKLGWYK|EN 0.077 . TA05020 458 GWYKENR|RV 0.102 . TA05020 459 WYKENRR|VI 0.111 . TA05020 465 RVIPDSK|PI 0.070 . TA05020 468 PDSKPIR|TT 0.106 . TA05020 475 TTESTHK|IY 0.063 . TA05020 489 DQTEELK|QE 0.059 . TA05020 498 HIDEIDK|FT 0.057 . TA05020 507 INLSGNR|HV 0.085 . TA05020 511 GNRHVPK|NS 0.072 . TA05020 517 KNSVYIK|SE 0.089 . TA05020 526 YYENLEK|IL 0.056 . TA05020 529 NLEKILK|RN 0.055 . TA05020 530 LEKILKR|NR 0.136 . TA05020 532 KILKRNR|IF 0.076 . TA05020 536 RNRIFFK|RA 0.086 . TA05020 537 NRIFFKR|AF 0.244 . TA05020 543 RAFSSLR|YE 0.103 . TA05020 550 YEGGTLK|PK 0.061 . TA05020 552 GGTLKPK|ID 0.065 . TA05020 568 GLESFLK|LY 0.062 . TA05020 579 YVELISK|NE 0.049 . TA05020 590 EDLEIAK|FW 0.068 . TA05020 593 EIAKFWK|TV 0.092 . TA05020 597 FWKTVFK|RL 0.063 . TA05020 598 WKTVFKR|LL 0.160 . TA05020 607 NAPPVNK|PQ 0.056 . TA05020 610 PVNKPQR|YY 0.099 . TA05020 617 YYAICSK|IN 0.057 . ____________________________^_________________

  • Fasta :-

    >TA05020 ATGTCCTCCGATTTCGGTGGCTTTGATTTACACATCCAGGCCCTAGAGGAATGGTATAAA ATTTTGACTAAAGGATTAAAAGGCGATATTTCGCCCATCAAACACAAAGATCTACCGAAG AATAAGGAGAAATATAATAAAACCATAGAATCCTATAAGGAAAAGTGCTTAGCACTTTGT TTTGTCGTTAATGTGTCCTTCATCAATTCAGTGACTGAGTCGGCCTTGTTTAAATCTTTA TGTGTATCGTTTTTCGATAAGTATTACAACGATCAATATGAGCCTTTTTTGATATTTAAA TTTCTCACTTCTAACTTTAAGCCTACCGTTGAATACTCCTACATTAAAATGTCCTCTCTC AAGAAAGGCGAATACCTTTTTAGACTTTTAAGGTATTATCAGAACCAAATTTATTATTTT AGAGCACTTCAGAAGTTTAAGGCACACTACGATATTATTACAATGGGAATTTGGTGTGAG TTTTTTGACACGAAGGACCGTTTCTGGAAGTATGTGGATTTTTCAGAACCAAAATTCGAC AATAGCGCCTATTCATATTCTGGATCACCTAGATCAAATGATAAATCGTACCTAAGTAGA CCAGTTAAGAAACTGAAAGACAAAAATGTAAATTCCAATATCTTATCAAATGACCGTGAG ATACCGTTCGAGAATAACTCTGAATCATCTTATAAGGGTTATTTATACATTCAAAGGGGT AGAAAGATGTTCATATATAGCAAGAATAATAGGTTGGAGGTCAAGGCCATAGTGTTGTTC CCAGAATATAACTATAAAACTAGCAGAATGTTATATGTAAAGGAATTCCCGTTTGAGCTC GTCAATACTGCTCATTCACTCAAAGTTTCCATCGCAAATAGTAATTCAGGCGTTACCGGG TCTGATAAAAATTTATTTATATTAAGTTGTAATATATGTGGAATTGTCTCGGAGATAACA CCAAAATACGTCCAAGAATGTTTGTTGTATCAGAGGAAAAGATCCTTCATACAATGGTTT GAACAATTTTTACAGAGTATAAACCAGAGGAGAATATCTGGTCTTACAAGTTCTTTTGAT AAATCTGGTTTAAACGCTTTGAATTTGGCTGAAAGACTTGACGTTCACTTAATTAACGCA AACATGTTGGAAAAGGTTGATGCCAAGCTCATTAAAACCCTCACAAAAACCTATCCCTTA CCAACAAAAAAGGCTCATTTTACAAATCATCCCATTTATGTACTAAAATCGCAGATAAAG AAAGGTGTTCTTAGTGAAGGACCTCCGTTAACTACTTTTGGGAATGATTTGGTGTATTTA CGGGAGAGTTTGGTCGAAATTAAGACAAAATTAGGCTGGTATAAGGAGAATAGAAGAGTT ATTCCAGATTCAAAACCAATCCGTACAACTGAATCCACACACAAAATTTACGAATATTAT AGTTTTGATCAGACTGAAGAGTTAAAACAGGAGCACATTGACGAAATAGACAAATTTACC ATCAACTTATCTGGAAACAGACATGTTCCTAAGAACAGCGTATATATTAAGAGTGAGTAT TACGAGAATTTGGAGAAGATATTGAAGAGAAACAGAATATTTTTCAAGAGGGCGTTTTCC TCGTTACGTTATGAAGGTGGCACTTTAAAGCCAAAAATCGACGGAGTTTTGATTTCACCC AGTGGGTTGGAGTCATTTTTGAAGTTATACAACGAGTATGTAGAATTGATTTCTAAAAAT GAACTGTTTGAGGATCTTGAGATAGCTAAGTTTTGGAAAACCGTCTTCAAAAGGCTACTC AACGCACCTCCGGTGAATAAACCCCAAAGATACTATGCTATATGCTCTAAAATCAATGCT GAAACTGATGAGTTTTTAAACCAGCTGAATTAA
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA05020443 SYLRESLVEI0.992unspTA05020443 SYLRESLVEI0.992unspTA05020443 SYLRESLVEI0.992unspTA0502051 SKTIESYKEK0.991unspTA05020185 SNSAYSYSGS0.991unsp

TA05020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India