TA06155 | 20S proteasome beta 5 subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA06155OTHER0.9999610.0000170.000023
No Results

  • Fasta :-

    >TA06155 MEENDLKRYDDVVIQSGNATDILRNGFKIFPIKEVNMLNTYMTQEARNVKNFKKGTTTLG FIFDQGVILAVDSRASMGPIVSTQNVSKVIEINSYLLGTMAGGAADCSYWERHLAKLCRL HELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYYVSSEGERVKGKL FSVGSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDGFSGGFVNLYHVHKDGWT KIVDRRDINELHYLYADKKGNKRHIRSIYL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA06155.fa Sequence name : TA06155 Sequence length : 270 VALUES OF COMPUTED PARAMETERS Coef20 : 3.220 CoefTot : 0.000 ChDiff : 5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.300 0.110 0.574 MesoH : -0.120 0.350 -0.231 0.289 MuHd_075 : 7.004 1.498 1.830 1.453 MuHd_095 : 27.874 16.761 8.420 6.461 MuHd_100 : 24.518 15.867 7.926 6.116 MuHd_105 : 22.337 14.287 7.252 5.397 Hmax_075 : -13.825 -0.350 -5.443 0.572 Hmax_095 : -6.738 0.700 -3.073 1.680 Hmax_100 : -8.900 3.100 -3.185 1.740 Hmax_105 : -0.350 7.700 -1.029 3.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9631 0.0369 DFMC : 0.9764 0.0236
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 270 TA06155 MEENDLKRYDDVVIQSGNATDILRNGFKIFPIKEVNMLNTYMTQEARNVKNFKKGTTTLGFIFDQGVILAVDSRASMGPI 80 VSTQNVSKVIEINSYLLGTMAGGAADCSYWERHLAKLCRLHELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYD 160 LNGPGLYYVSSEGERVKGKLFSVGSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDGFSGGFVNLYHVHKDGWT 240 KIVDRRDINELHYLYADKKGNKRHIRSIYL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .........................P.... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA06155 7 MEENDLK|RY 0.066 . TA06155 8 EENDLKR|YD 0.248 . TA06155 24 NATDILR|NG 0.081 . TA06155 28 ILRNGFK|IF 0.069 . TA06155 33 FKIFPIK|EV 0.075 . TA06155 47 YMTQEAR|NV 0.097 . TA06155 50 QEARNVK|NF 0.158 . TA06155 53 RNVKNFK|KG 0.068 . TA06155 54 NVKNFKK|GT 0.137 . TA06155 74 ILAVDSR|AS 0.088 . TA06155 88 STQNVSK|VI 0.068 . TA06155 112 DCSYWER|HL 0.096 . TA06155 116 WERHLAK|LC 0.067 . TA06155 119 HLAKLCR|LH 0.085 . TA06155 124 CRLHELR|NQ 0.079 . TA06155 128 ELRNQCR|IS 0.094 . TA06155 146 NIFYYFK|GY 0.067 . TA06155 175 VSSEGER|VK 0.096 . TA06155 177 SEGERVK|GK 0.065 . TA06155 179 GERVKGK|LF 0.086 . TA06155 199 VIDQGYR|SN 0.108 . TA06155 213 AVELGTR|AI 0.091 . TA06155 221 IYQAGHR|DG 0.094 . TA06155 236 NLYHVHK|DG 0.081 . TA06155 241 HKDGWTK|IV 0.074 . TA06155 245 WTKIVDR|RD 0.085 . TA06155 246 TKIVDRR|DI 0.201 . TA06155 258 HYLYADK|KG 0.053 . TA06155 259 YLYADKK|GN 0.105 . TA06155 262 ADKKGNK|RH 0.056 . TA06155 263 DKKGNKR|HI 0.167 . TA06155 266 GNKRHIR|SI 0.512 *ProP* ____________________________^_________________

  • Fasta :-

    >TA06155 ATGGAAGAAAATGATTTAAAGCGGTATGACGATGTTGTTATCCAGTCAGGAAACGCAACA GATATTCTAAGGAATGGATTCAAGATATTTCCAATTAAAGAGGTGAATATGTTAAACACA TATATGACACAAGAGGCTCGAAACGTTAAGAATTTTAAAAAGGGAACAACAACATTAGGG TTTATTTTTGATCAAGGAGTTATACTTGCAGTTGATAGCAGGGCCTCGATGGGTCCTATA GTCTCAACTCAGAACGTCAGCAAAGTCATTGAGATCAACTCTTATCTCTTGGGAACCATG GCAGGTGGAGCAGCAGACTGTTCATACTGGGAAAGACATCTTGCAAAGCTCTGCAGATTA CATGAGCTTAGAAATCAGTGCCGGATCTCTGTTGGAGCTGCTTCACAGATTCTAGCAAAC ATCTTCTACTATTTCAAGGGCTATGGACTATCAGCTGGAACAATGATTGCTGGATATGAT CTGAACGGACCTGGGCTATATTATGTCAGTAGTGAAGGCGAGAGGGTCAAGGGAAAGCTA TTTAGCGTAGGCTCAGGCTCCTTGTTTGCTTACGGTGTTATTGACCAGGGATATAGAAGT AATATGACACTTGAAGAAGCAGTAGAGCTTGGAACAAGAGCTATTTACCAAGCTGGACAT AGAGACGGTTTTTCAGGAGGATTTGTTAACTTATACCATGTTCATAAGGACGGCTGGACC AAGATTGTTGATCGTCGAGACATTAACGAGCTCCATTATCTATATGCTGATAAGAAAGGT AATAAGAGACACATTAGATCAATATATCTATAA
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  • Fasta :-

    MEENDLKRYDDVVIQSGNATDILRNGFKIFPIKEVNMLNTYMTQEARNVKNFKKGTTTLG FIFDQGVILAVDSRASMGPIVSTQNVSKVIEINSYLLGTMAGGAADCSYWERHLAKLCRL HELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYYVSSEGERVKGKL FSVGSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDGFSGGFVNLYHVHKDGWT KIVDRRDINELHYLYADKKGNKRHIRSIYL

  • title: active site
  • coordinates: T56,D72,R74,K88,S185,D222,S225,G226
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TA06155      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India