TA07540 | eukaryotic translation initiation factor, putative

_IDPredictionOTHERSPmTPCS_Position
TA07540OTHER0.9998050.0001800.000016
No Results

  • Fasta :-

    >TA07540 MVRVNPSDLSQEELEIGILDWVSDDDEEFDQSQLERFYEQDPPVTLDKSFKRTLMGIFYF LNLFSVLGLPVVGPEKHDRLRDVVRKTITKELEKKGCEIQTPFVLEIPTDGSKQTKGLAF FTFGTPFEANMALKFINKFKLDSSHAFKAILVDNFDMIVSDDNKCVPPLKTFGFTREGIR DWWIMGERMRDQFVIRYADKTEVYWFDSVHREPKLAYDGSRERAEGRRPWADQKVEWSPN GSYLAVYKWAGIALYGGNNFELKIRFEHKNVKNIQFSPCEEYLLTWDGSKGEDRHEKSIC IWRVITGELLRSFPTPLKSPKGGDFPHLLWNRTGKYIAMLNQFLEGSEVLVYRLPEMTLI EGPDGKPAPLKYSAEKFDWSPQDDILSVVIPGSLDTPARLVLVEIPSRRELSSRNVYNVC EVAMHWHSKGDCLCLRTTISKKTGKKGRKQFNQLEIFRLRERNIPVDTIQIQDATVKQLH WEEGGSKRFALIVKDEETRSHSIRFYKVSDVGATRDTVWTTTFDITSQLNHMQWSPAGNY FVLGGLGAEGSLFFCALNDNDKVDVLYKDEHFMMNTIRWSSCGRYLATCVNVPMPQHNAT TSDSFRYSAEAGYCLWTFQGRLLCKDRKENFYSFDFRPHPTPLLKRTEIEKIKKNLKEYT KRYDLIDEKERKDYRDSYLQKRQNNLDAFKQLYSSLLQWYTSQDNYLEFKSGWDKFLNPL DWEVTDEVYQEVIDIKEEVFE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA07540.fa Sequence name : TA07540 Sequence length : 741 VALUES OF COMPUTED PARAMETERS Coef20 : 3.376 CoefTot : -0.140 ChDiff : -8 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.912 1.924 0.289 0.769 MesoH : -0.588 0.145 -0.425 0.187 MuHd_075 : 20.074 8.610 3.194 2.456 MuHd_095 : 19.940 8.970 5.031 4.061 MuHd_100 : 10.365 3.030 3.781 1.861 MuHd_105 : 10.592 1.945 3.550 1.153 Hmax_075 : 8.283 14.000 0.970 4.363 Hmax_095 : 3.938 8.750 0.075 3.833 Hmax_100 : 1.700 6.200 -0.537 3.280 Hmax_105 : 9.400 9.700 0.678 3.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9729 0.0271 DFMC : 0.9691 0.0309
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 741 TA07540 MVRVNPSDLSQEELEIGILDWVSDDDEEFDQSQLERFYEQDPPVTLDKSFKRTLMGIFYFLNLFSVLGLPVVGPEKHDRL 80 RDVVRKTITKELEKKGCEIQTPFVLEIPTDGSKQTKGLAFFTFGTPFEANMALKFINKFKLDSSHAFKAILVDNFDMIVS 160 DDNKCVPPLKTFGFTREGIRDWWIMGERMRDQFVIRYADKTEVYWFDSVHREPKLAYDGSRERAEGRRPWADQKVEWSPN 240 GSYLAVYKWAGIALYGGNNFELKIRFEHKNVKNIQFSPCEEYLLTWDGSKGEDRHEKSICIWRVITGELLRSFPTPLKSP 320 KGGDFPHLLWNRTGKYIAMLNQFLEGSEVLVYRLPEMTLIEGPDGKPAPLKYSAEKFDWSPQDDILSVVIPGSLDTPARL 400 VLVEIPSRRELSSRNVYNVCEVAMHWHSKGDCLCLRTTISKKTGKKGRKQFNQLEIFRLRERNIPVDTIQIQDATVKQLH 480 WEEGGSKRFALIVKDEETRSHSIRFYKVSDVGATRDTVWTTTFDITSQLNHMQWSPAGNYFVLGGLGAEGSLFFCALNDN 560 DKVDVLYKDEHFMMNTIRWSSCGRYLATCVNVPMPQHNATTSDSFRYSAEAGYCLWTFQGRLLCKDRKENFYSFDFRPHP 640 TPLLKRTEIEKIKKNLKEYTKRYDLIDEKERKDYRDSYLQKRQNNLDAFKQLYSSLLQWYTSQDNYLEFKSGWDKFLNPL 720 DWEVTDEVYQEVIDIKEEVFE 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ..................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA07540 3 ----MVR|VN 0.076 . TA07540 36 DQSQLER|FY 0.148 . TA07540 48 PPVTLDK|SF 0.085 . TA07540 51 TLDKSFK|RT 0.075 . TA07540 52 LDKSFKR|TL 0.225 . TA07540 76 PVVGPEK|HD 0.054 . TA07540 79 GPEKHDR|LR 0.126 . TA07540 81 EKHDRLR|DV 0.176 . TA07540 85 RLRDVVR|KT 0.127 . TA07540 86 LRDVVRK|TI 0.124 . TA07540 90 VRKTITK|EL 0.074 . TA07540 94 ITKELEK|KG 0.057 . TA07540 95 TKELEKK|GC 0.143 . TA07540 113 IPTDGSK|QT 0.056 . TA07540 116 DGSKQTK|GL 0.078 . TA07540 134 EANMALK|FI 0.076 . TA07540 138 ALKFINK|FK 0.066 . TA07540 140 KFINKFK|LD 0.067 . TA07540 148 DSSHAFK|AI 0.077 . TA07540 164 IVSDDNK|CV 0.072 . TA07540 170 KCVPPLK|TF 0.066 . TA07540 176 KTFGFTR|EG 0.080 . TA07540 180 FTREGIR|DW 0.101 . TA07540 188 WWIMGER|MR 0.075 . TA07540 190 IMGERMR|DQ 0.111 . TA07540 196 RDQFVIR|YA 0.190 . TA07540 200 VIRYADK|TE 0.059 . TA07540 211 WFDSVHR|EP 0.073 . TA07540 214 SVHREPK|LA 0.206 . TA07540 221 LAYDGSR|ER 0.085 . TA07540 223 YDGSRER|AE 0.079 . TA07540 227 RERAEGR|RP 0.090 . TA07540 228 ERAEGRR|PW 0.175 . TA07540 234 RPWADQK|VE 0.056 . TA07540 248 SYLAVYK|WA 0.091 . TA07540 263 GNNFELK|IR 0.066 . TA07540 265 NFELKIR|FE 0.096 . TA07540 269 KIRFEHK|NV 0.106 . TA07540 272 FEHKNVK|NI 0.065 . TA07540 290 LTWDGSK|GE 0.065 . TA07540 294 GSKGEDR|HE 0.082 . TA07540 297 GEDRHEK|SI 0.277 . TA07540 303 KSICIWR|VI 0.098 . TA07540 311 ITGELLR|SF 0.098 . TA07540 318 SFPTPLK|SP 0.065 . TA07540 321 TPLKSPK|GG 0.067 . TA07540 332 PHLLWNR|TG 0.064 . TA07540 335 LWNRTGK|YI 0.182 . TA07540 353 SEVLVYR|LP 0.089 . TA07540 366 IEGPDGK|PA 0.064 . TA07540 371 GKPAPLK|YS 0.088 . TA07540 376 LKYSAEK|FD 0.070 . TA07540 399 SLDTPAR|LV 0.138 . TA07540 408 LVEIPSR|RE 0.065 . TA07540 409 VEIPSRR|EL 0.115 . TA07540 414 RRELSSR|NV 0.143 . TA07540 429 AMHWHSK|GD 0.084 . TA07540 436 GDCLCLR|TT 0.084 . TA07540 441 LRTTISK|KT 0.077 . TA07540 442 RTTISKK|TG 0.108 . TA07540 445 ISKKTGK|KG 0.078 . TA07540 446 SKKTGKK|GR 0.091 . TA07540 448 KTGKKGR|KQ 0.132 . TA07540 449 TGKKGRK|QF 0.095 . TA07540 458 NQLEIFR|LR 0.072 . TA07540 460 LEIFRLR|ER 0.079 . TA07540 462 IFRLRER|NI 0.076 . TA07540 477 IQDATVK|QL 0.075 . TA07540 487 WEEGGSK|RF 0.057 . TA07540 488 EEGGSKR|FA 0.276 . TA07540 494 RFALIVK|DE 0.070 . TA07540 499 VKDEETR|SH 0.096 . TA07540 504 TRSHSIR|FY 0.211 . TA07540 507 HSIRFYK|VS 0.192 . TA07540 515 SDVGATR|DT 0.087 . TA07540 562 ALNDNDK|VD 0.055 . TA07540 568 KVDVLYK|DE 0.069 . TA07540 578 FMMNTIR|WS 0.113 . TA07540 584 RWSSCGR|YL 0.133 . TA07540 606 TTSDSFR|YS 0.150 . TA07540 621 LWTFQGR|LL 0.087 . TA07540 625 QGRLLCK|DR 0.069 . TA07540 627 RLLCKDR|KE 0.076 . TA07540 628 LLCKDRK|EN 0.083 . TA07540 637 FYSFDFR|PH 0.083 . TA07540 645 HPTPLLK|RT 0.061 . TA07540 646 PTPLLKR|TE 0.125 . TA07540 651 KRTEIEK|IK 0.057 . TA07540 653 TEIEKIK|KN 0.061 . TA07540 654 EIEKIKK|NL 0.085 . TA07540 657 KIKKNLK|EY 0.059 . TA07540 661 NLKEYTK|RY 0.059 . TA07540 662 LKEYTKR|YD 0.164 . TA07540 669 YDLIDEK|ER 0.054 . TA07540 671 LIDEKER|KD 0.066 . TA07540 672 IDEKERK|DY 0.121 . TA07540 675 KERKDYR|DS 0.114 . TA07540 681 RDSYLQK|RQ 0.062 . TA07540 682 DSYLQKR|QN 0.115 . TA07540 690 NNLDAFK|QL 0.067 . TA07540 710 DNYLEFK|SG 0.078 . TA07540 715 FKSGWDK|FL 0.074 . TA07540 736 QEVIDIK|EE 0.056 . ____________________________^_________________

  • Fasta :-

    >TA07540 ATGGTTAGAGTAAACCCGTCAGATCTCAGCCAAGAGGAACTTGAAATAGGCATTTTGGAC TGGGTTTCTGACGATGACGAAGAATTTGATCAATCACAACTAGAAAGGTTTTACGAACAA GACCCACCTGTAACGCTGGATAAAAGCTTCAAGAGAACGTTGATGGGTATTTTTTATTTT TTAAATTTATTTTCAGTTTTGGGACTCCCAGTGGTTGGCCCTGAAAAACACGACAGACTT CGAGACGTAGTTCGTAAAACAATAACAAAAGAGTTGGAGAAAAAGGGATGTGAGATTCAA ACGCCGTTTGTACTGGAGATACCAACAGATGGTAGTAAGCAGACGAAAGGGTTGGCCTTT TTTACATTTGGAACTCCATTTGAAGCGAACATGGCCCTGAAGTTCATAAACAAGTTTAAG CTGGACTCTTCCCATGCATTTAAGGCCATTTTGGTGGACAACTTTGACATGATAGTGAGC GACGATAATAAGTGCGTGCCACCACTAAAGACATTTGGATTTACGAGGGAAGGAATTAGG GACTGGTGGATCATGGGAGAACGCATGAGGGACCAGTTTGTAATAAGATACGCAGACAAA ACTGAGGTGTACTGGTTCGACTCAGTTCACCGGGAGCCAAAGCTGGCATATGATGGATCG AGAGAGAGAGCCGAGGGTAGAAGACCATGGGCAGATCAGAAAGTAGAATGGAGTCCAAAC GGGTCCTATTTAGCAGTTTACAAGTGGGCAGGAATAGCACTTTACGGAGGAAATAACTTT GAACTGAAAATAAGATTCGAACACAAGAATGTAAAAAACATACAATTCTCACCATGTGAA GAATATCTTCTAACATGGGATGGTTCAAAGGGAGAGGACAGGCATGAAAAATCTATTTGT ATCTGGAGAGTTATTACAGGTGAGCTTTTGAGGAGTTTCCCAACGCCGTTAAAGTCACCG AAGGGTGGAGACTTCCCTCACCTGCTCTGGAACAGAACTGGAAAGTACATTGCAATGCTG AACCAGTTTTTAGAAGGCAGTGAAGTGCTCGTTTACAGGCTGCCTGAAATGACACTAATT GAAGGACCAGACGGGAAACCAGCGCCTCTCAAGTACTCGGCTGAAAAGTTCGATTGGTCT CCTCAAGATGATATCCTCTCTGTTGTTATTCCAGGCTCACTAGATACTCCAGCGAGGTTG GTGTTGGTTGAGATACCGTCAAGACGAGAGTTGAGTTCAAGGAATGTATACAATGTGTGC GAAGTTGCAATGCACTGGCACTCGAAAGGAGATTGCCTATGCTTGAGGACTACGATTTCT AAAAAGACTGGGAAAAAGGGAAGAAAACAGTTTAACCAGCTTGAAATATTCCGTCTAAGA GAAAGAAACATACCAGTTGATACAATACAAATACAAGATGCAACAGTAAAACAATTACAC TGGGAAGAAGGTGGAAGTAAGAGATTTGCGTTGATTGTTAAGGACGAGGAGACTAGGAGC CATTCCATCAGATTCTACAAGGTCTCAGATGTAGGAGCCACGAGAGATACTGTTTGGACG ACAACATTCGACATCACCTCACAACTGAACCATATGCAATGGTCACCAGCAGGAAACTAC TTTGTGCTGGGAGGATTGGGCGCAGAAGGCTCACTCTTTTTCTGCGCACTAAACGATAAC GATAAAGTCGACGTGTTATATAAGGATGAGCACTTTATGATGAATACAATAAGGTGGAGT AGTTGTGGAAGGTATTTGGCAACATGTGTCAATGTCCCAATGCCTCAACATAACGCAACA ACCTCAGATTCATTCAGATATAGTGCGGAAGCTGGATATTGCCTGTGGACATTCCAGGGC AGACTGTTGTGTAAGGACAGGAAGGAGAACTTCTACAGCTTCGATTTCAGACCCCACCCA ACTCCATTGCTTAAAAGGACAGAAATTGAAAAGATCAAGAAGAACCTTAAGGAGTACACG AAAAGGTACGACCTCATAGACGAAAAGGAGAGGAAGGACTACAGAGATTCGTACCTACAG AAAAGACAAAATAATCTCGACGCCTTCAAACAGCTATATTCATCACTCTTACAGTGGTAC ACGTCACAGGACAACTATTTGGAGTTCAAGTCCGGATGGGACAAGTTTTTAAACCCGCTG GACTGGGAAGTCACAGATGAAGTGTATCAGGAAGTAATTGACATAAAGGAGGAGGTTTTT GAGTAA
  • Download Fasta

  • Fasta :-

    MVRVNPSDLSQEELEIGILDWVSDDDEEFDQSQLERFYEQDPPVTLDKSFKRTLMGIFYF LNLFSVLGLPVVGPEKHDRLRDVVRKTITKELEKKGCEIQTPFVLEIPTDGSKQTKGLAF FTFGTPFEANMALKFINKFKLDSSHAFKAILVDNFDMIVSDDNKCVPPLKTFGFTREGIR DWWIMGERMRDQFVIRYADKTEVYWFDSVHREPKLAYDGSRERAEGRRPWADQKVEWSPN GSYLAVYKWAGIALYGGNNFELKIRFEHKNVKNIQFSPCEEYLLTWDGSKGEDRHEKSIC IWRVITGELLRSFPTPLKSPKGGDFPHLLWNRTGKYIAMLNQFLEGSEVLVYRLPEMTLI EGPDGKPAPLKYSAEKFDWSPQDDILSVVIPGSLDTPARLVLVEIPSRRELSSRNVYNVC EVAMHWHSKGDCLCLRTTISKKTGKKGRKQFNQLEIFRLRERNIPVDTIQIQDATVKQLH WEEGGSKRFALIVKDEETRSHSIRFYKVSDVGATRDTVWTTTFDITSQLNHMQWSPAGNY FVLGGLGAEGSLFFCALNDNDKVDVLYKDEHFMMNTIRWSSCGRYLATCVNVPMPQHNAT TSDSFRYSAEAGYCLWTFQGRLLCKDRKENFYSFDFRPHPTPLLKRTEIEKIKKNLKEYT KRYDLIDEKERKDYRDSYLQKRQNNLDAFKQLYSSLLQWYTSQDNYLEFKSGWDKFLNPL DWEVTDEVYQEVIDIKEEVFE

  • title: polypeptide substrate binding site
  • coordinates: V66,L69,K76,R79,L80,D82,V83,V84,K86,T87,K90,F135,I136,N137,K138,K140,L141,A146,F147
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA07540277 SNIQFSPCEE0.995unspTA07540277 SNIQFSPCEE0.995unspTA07540277 SNIQFSPCEE0.995unspTA07540319 STPLKSPKGG0.997unspTA07540502 STRSHSIRFY0.996unspTA07540608 SSFRYSAEAG0.995unspTA0754010 SPSDLSQEEL0.996unspTA0754049 STLDKSFKRT0.99unsp

TA07540      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India