TA07815 | proteasome subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA07815OTHER0.9995000.0001010.000399
No Results

  • Fasta :-

    >TA07815 MNRPEERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGT SGMQADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGID EQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLV KNAMVSAVERDICTGNHHS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA07815.fa Sequence name : TA07815 Sequence length : 199 VALUES OF COMPUTED PARAMETERS Coef20 : 3.294 CoefTot : -0.252 ChDiff : 1 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.906 0.888 -0.021 0.498 MesoH : -0.574 0.178 -0.332 0.187 MuHd_075 : 6.047 4.504 0.592 2.059 MuHd_095 : 30.798 17.525 8.603 6.526 MuHd_100 : 33.651 20.992 8.951 7.904 MuHd_105 : 31.980 20.736 7.786 8.032 Hmax_075 : -7.200 0.900 -3.402 0.190 Hmax_095 : 10.800 5.200 0.767 4.280 Hmax_100 : 12.400 9.800 1.328 4.900 Hmax_105 : -6.388 -2.000 -3.614 1.120 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8276 0.1724 DFMC : 0.7965 0.2035
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 199 TA07815 MNRPEERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSVLERQIEL 80 YRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLN 160 GNNQKVKPEVNSLEDLVNLVKNAMVSAVERDICTGNHHS 240 ................................................................................ 80 ................................................................................ 160 ....................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA07815 3 ----MNR|PE 0.083 . TA07815 7 MNRPEER|FN 0.109 . TA07815 34 VIAADTR|LS 0.076 . TA07815 38 DTRLSQR|YL 0.103 . TA07815 44 RYLIHTR|FS 0.089 . TA07815 48 HTRFSTK|LF 0.060 . TA07815 51 FSTKLFK|LT 0.068 . TA07815 55 LFKLTDK|CI 0.060 . TA07815 76 LQSVLER|QI 0.138 . TA07815 82 RQIELYR|FT 0.119 . TA07815 87 YRFTHNR|EP 0.088 . TA07815 105 STVLYGR|RF 0.074 . TA07815 106 TVLYGRR|FF 0.102 . TA07815 124 GIDEQGK|GV 0.074 . TA07815 140 GNYNYEK|YT 0.085 . TA07815 165 LNGNNQK|VK 0.060 . TA07815 167 GNNQKVK|PE 0.073 . TA07815 181 DLVNLVK|NA 0.058 . TA07815 190 MVSAVER|DI 0.233 . ____________________________^_________________

  • Fasta :-

    >TA07815 ATGAACCGACCGGAGGAAAGATTCAACCCATACGTAAATAACGGAGGAACAGTCATCGCC GCAACGTGGAACAACTACGCAGTCATCGCCGCCGACACAAGACTATCACAAAGATACCTC ATACATACCAGATTCTCAACTAAACTATTTAAACTGACTGATAAATGTATTCTGGGAACA TCAGGAATGCAAGCAGATATGCTGGCTCTACAATCAGTACTAGAAAGACAAATAGAGCTG TACAGATTCACACATAATAGAGAACCAACATTTAACGCAATTGCACAATTACTATCAACA GTGCTGTATGGAAGACGTTTCTTCCCCTATTATACCTTTAATATTCTATGCGGGATAGAC GAGCAAGGAAAAGGGGTAGTATGTGGATATGATGCAGTTGGAAATTATAATTATGAAAAG TACACAGCCCAGGGCACGAGTTCTTCATTGGTGATATCAGTACTGGACAATTTGTTGAAT GGAAATAACCAAAAAGTCAAGCCGGAAGTAAACTCGCTGGAAGATCTTGTTAATTTGGTT AAAAACGCAATGGTTTCAGCAGTAGAAAGGGATATCTGTACAGGTAATCACCACAGCTAG
  • Download Fasta

  • Fasta :-

    MNRPEERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGT SGMQADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGID EQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLV KNAMVSAVERDICTGNHHS

  • title: active site
  • coordinates: G16,D32,R34,K48,T146,D191,T194,G195
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA0781546 SHTRFSTKLF0.996unspTA07815172 SPEVNSLEDL0.996unsp

TA07815      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India