TA08065 | peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
TA08065mTP0.3709270.0001240.628949CS pos: 36-37. VRN-SI. Pr: 0.3418
No Results

  • Fasta :-

    >TA08065 MSFNKLINRSSFLSKLFSQLSHRNRTFVSHSNNVRNSISYLNWVPESEKTNSFSKVDLEQ AVNSDNSLSFSRFILNYKNKVKELSSTISEIESFYKSNHEGLSDTSLEYEIIGKYAYYLV HNSSSLSLFRTPLQGYSRFRRLINELNNDDICKFLMERGKPLLDFSKISQQGISNIKKIR ISPGSDLIAIIYDPNLEDKHTLSIYSVSKGEISKTLEDIGEVYFMPYPKNSSFTRLYYTV LNPQKRSHKFCTSLIFNRTGNFCSNRLMYEDPKHFISLFKSKSGRVLFMATVSYNKVFSA YMITKSGKMFTVPIVSGSKLMLEYRNGLVYSVYSDVVSNIYTNSLRNLRAFKSMKNDKSN NGSNFCGRIVGELDYVVSDIDMFNEAMVLYLIKPPSSPTVGLLKFSPLISKNVTNVRKPD NNAFELEVLEIPVAVGLIEPGINMNYKNKSAKFTVNTPGNSCLGFEVDLVNKLVKSTTPI NSNVKSIVLKAPTRDGSCNIPLTLVSKFLNNYDTKNVKKILENSDYCKIDEIFNRKCVLY VYGFYGENLTVCNYMEHSKLLEMGYTLCFAHVRGGGELGESWREMGNKEKKYNSFYDLVD VIQFLISKNITSRIKLAISVSSASGILGGCIYNMRPDLCSIIIFKLPYLDHFTTLNDRSQ PLVELEYEEFGTTKEDEGEEYNVDHVYSIDPCVNMKKTQAKRPAILINCNVNDTRAPWYH TAKFLDILEKQKDNENILVKVGDYGHEGRPPEHYLVRTCAEEISIIDNFLKD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08065.fa Sequence name : TA08065 Sequence length : 772 VALUES OF COMPUTED PARAMETERS Coef20 : 4.694 CoefTot : 0.063 ChDiff : 12 ZoneTo : 45 KR : 6 DE : 0 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.612 1.512 0.402 0.612 MesoH : -0.287 0.519 -0.289 0.256 MuHd_075 : 43.108 29.453 11.805 10.789 MuHd_095 : 28.254 25.665 9.247 7.318 MuHd_100 : 35.347 25.229 11.095 7.850 MuHd_105 : 39.875 29.576 13.645 9.380 Hmax_075 : 15.867 20.883 2.807 5.180 Hmax_095 : 11.000 17.700 1.456 6.318 Hmax_100 : 17.300 17.700 2.833 4.170 Hmax_105 : 18.433 13.563 3.673 3.605 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0035 0.9965 DFMC : 0.0051 0.9949 This protein is probably imported in chloroplast. f(Ser) = 0.2222 f(Arg) = 0.0889 CMi = 1.14286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 772 TA08065 MSFNKLINRSSFLSKLFSQLSHRNRTFVSHSNNVRNSISYLNWVPESEKTNSFSKVDLEQAVNSDNSLSFSRFILNYKNK 80 VKELSSTISEIESFYKSNHEGLSDTSLEYEIIGKYAYYLVHNSSSLSLFRTPLQGYSRFRRLINELNNDDICKFLMERGK 160 PLLDFSKISQQGISNIKKIRISPGSDLIAIIYDPNLEDKHTLSIYSVSKGEISKTLEDIGEVYFMPYPKNSSFTRLYYTV 240 LNPQKRSHKFCTSLIFNRTGNFCSNRLMYEDPKHFISLFKSKSGRVLFMATVSYNKVFSAYMITKSGKMFTVPIVSGSKL 320 MLEYRNGLVYSVYSDVVSNIYTNSLRNLRAFKSMKNDKSNNGSNFCGRIVGELDYVVSDIDMFNEAMVLYLIKPPSSPTV 400 GLLKFSPLISKNVTNVRKPDNNAFELEVLEIPVAVGLIEPGINMNYKNKSAKFTVNTPGNSCLGFEVDLVNKLVKSTTPI 480 NSNVKSIVLKAPTRDGSCNIPLTLVSKFLNNYDTKNVKKILENSDYCKIDEIFNRKCVLYVYGFYGENLTVCNYMEHSKL 560 LEMGYTLCFAHVRGGGELGESWREMGNKEKKYNSFYDLVDVIQFLISKNITSRIKLAISVSSASGILGGCIYNMRPDLCS 640 IIIFKLPYLDHFTTLNDRSQPLVELEYEEFGTTKEDEGEEYNVDHVYSIDPCVNMKKTQAKRPAILINCNVNDTRAPWYH 720 TAKFLDILEKQKDNENILVKVGDYGHEGRPPEHYLVRTCAEEISIIDNFLKD 800 ................................................................................ 80 ............................................................P................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA08065 5 --MSFNK|LI 0.061 . TA08065 9 FNKLINR|SS 0.097 . TA08065 15 RSSFLSK|LF 0.079 . TA08065 23 FSQLSHR|NR 0.080 . TA08065 25 QLSHRNR|TF 0.091 . TA08065 35 SHSNNVR|NS 0.106 . TA08065 49 WVPESEK|TN 0.059 . TA08065 55 KTNSFSK|VD 0.058 . TA08065 72 NSLSFSR|FI 0.085 . TA08065 78 RFILNYK|NK 0.059 . TA08065 80 ILNYKNK|VK 0.069 . TA08065 82 NYKNKVK|EL 0.070 . TA08065 96 EIESFYK|SN 0.097 . TA08065 114 EYEIIGK|YA 0.067 . TA08065 130 SSLSLFR|TP 0.078 . TA08065 138 PLQGYSR|FR 0.076 . TA08065 140 QGYSRFR|RL 0.096 . TA08065 141 GYSRFRR|LI 0.524 *ProP* TA08065 153 NNDDICK|FL 0.067 . TA08065 158 CKFLMER|GK 0.068 . TA08065 160 FLMERGK|PL 0.062 . TA08065 167 PLLDFSK|IS 0.066 . TA08065 177 QGISNIK|KI 0.063 . TA08065 178 GISNIKK|IR 0.097 . TA08065 180 SNIKKIR|IS 0.097 . TA08065 199 DPNLEDK|HT 0.068 . TA08065 209 SIYSVSK|GE 0.062 . TA08065 214 SKGEISK|TL 0.077 . TA08065 229 YFMPYPK|NS 0.061 . TA08065 235 KNSSFTR|LY 0.133 . TA08065 245 TVLNPQK|RS 0.058 . TA08065 246 VLNPQKR|SH 0.253 . TA08065 249 PQKRSHK|FC 0.135 . TA08065 258 TSLIFNR|TG 0.070 . TA08065 266 GNFCSNR|LM 0.087 . TA08065 273 LMYEDPK|HF 0.064 . TA08065 280 HFISLFK|SK 0.083 . TA08065 282 ISLFKSK|SG 0.087 . TA08065 285 FKSKSGR|VL 0.141 . TA08065 296 ATVSYNK|VF 0.059 . TA08065 305 SAYMITK|SG 0.071 . TA08065 308 MITKSGK|MF 0.068 . TA08065 319 PIVSGSK|LM 0.052 . TA08065 325 KLMLEYR|NG 0.068 . TA08065 346 IYTNSLR|NL 0.081 . TA08065 349 NSLRNLR|AF 0.148 . TA08065 352 RNLRAFK|SM 0.130 . TA08065 355 RAFKSMK|ND 0.063 . TA08065 358 KSMKNDK|SN 0.100 . TA08065 368 GSNFCGR|IV 0.180 . TA08065 393 MVLYLIK|PP 0.060 . TA08065 404 PTVGLLK|FS 0.057 . TA08065 411 FSPLISK|NV 0.065 . TA08065 417 KNVTNVR|KP 0.076 . TA08065 418 NVTNVRK|PD 0.079 . TA08065 447 GINMNYK|NK 0.087 . TA08065 449 NMNYKNK|SA 0.107 . TA08065 452 YKNKSAK|FT 0.089 . TA08065 472 EVDLVNK|LV 0.058 . TA08065 475 LVNKLVK|ST 0.101 . TA08065 485 PINSNVK|SI 0.075 . TA08065 490 VKSIVLK|AP 0.071 . TA08065 494 VLKAPTR|DG 0.098 . TA08065 507 PLTLVSK|FL 0.062 . TA08065 515 LNNYDTK|NV 0.096 . TA08065 518 YDTKNVK|KI 0.055 . TA08065 519 DTKNVKK|IL 0.113 . TA08065 528 ENSDYCK|ID 0.068 . TA08065 535 IDEIFNR|KC 0.081 . TA08065 536 DEIFNRK|CV 0.085 . TA08065 559 NYMEHSK|LL 0.067 . TA08065 573 LCFAHVR|GG 0.109 . TA08065 583 ELGESWR|EM 0.113 . TA08065 588 WREMGNK|EK 0.059 . TA08065 590 EMGNKEK|KY 0.062 . TA08065 591 MGNKEKK|YN 0.121 . TA08065 608 IQFLISK|NI 0.057 . TA08065 613 SKNITSR|IK 0.092 . TA08065 615 NITSRIK|LA 0.061 . TA08065 635 GCIYNMR|PD 0.075 . TA08065 645 CSIIIFK|LP 0.055 . TA08065 658 FTTLNDR|SQ 0.080 . TA08065 674 EEFGTTK|ED 0.070 . TA08065 696 DPCVNMK|KT 0.075 . TA08065 697 PCVNMKK|TQ 0.081 . TA08065 701 MKKTQAK|RP 0.069 . TA08065 702 KKTQAKR|PA 0.171 . TA08065 715 CNVNDTR|AP 0.078 . TA08065 723 PWYHTAK|FL 0.095 . TA08065 730 FLDILEK|QK 0.060 . TA08065 732 DILEKQK|DN 0.072 . TA08065 740 NENILVK|VG 0.063 . TA08065 749 DYGHEGR|PP 0.093 . TA08065 757 PEHYLVR|TC 0.092 . TA08065 771 IIDNFLK|D- 0.072 . ____________________________^_________________

  • Fasta :-

    >TA08065 ATGAGTTTTAATAAACTCATAAATAGGAGTTCTTTCTTAAGTAAACTATTTTCTCAGCTA TCTCACCGCAATCGTACATTTGTATCCCACTCTAATAATGTTAGAAATAGTATATCATAT TTAAATTGGGTACCAGAGTCCGAAAAAACAAACTCTTTCTCTAAAGTAGATCTTGAACAA GCAGTAAATTCTGACAATTCCCTTTCCTTTTCAAGATTTATTCTTAATTACAAGAACAAG GTAAAGGAATTATCCTCGACAATTTCTGAGATTGAGTCTTTTTACAAGAGTAACCATGAA GGTTTGTCGGATACCAGTTTGGAATATGAAATAATAGGTAAATACGCTTACTACTTGGTT CATAATAGCTCTTCTTTGTCTCTTTTCAGAACGCCACTTCAAGGATATAGTAGGTTTAGA AGGTTAATAAATGAACTGAACAATGATGATATTTGCAAGTTTCTGATGGAACGAGGAAAG CCGTTGCTTGATTTTTCAAAAATAAGCCAACAAGGTATATCCAATATTAAGAAGATCAGA ATTAGTCCAGGATCAGATTTGATAGCGATTATATATGATCCTAATCTTGAAGATAAACAT ACGCTTTCAATTTACTCGGTATCAAAAGGGGAAATTTCAAAGACTTTGGAAGATATTGGA GAGGTTTACTTTATGCCATACCCAAAAAATTCTAGTTTTACTAGGCTATATTACACAGTG TTGAATCCACAGAAGAGGTCACACAAGTTTTGCACATCGCTTATATTCAATAGGACTGGA AATTTTTGCTCAAACAGACTGATGTATGAGGATCCAAAGCATTTTATATCACTATTCAAG AGTAAGAGTGGACGGGTTTTGTTTATGGCGACTGTGAGTTACAATAAAGTTTTTTCAGCC TACATGATAACGAAAAGTGGTAAAATGTTCACAGTTCCAATAGTTAGTGGATCAAAGTTG ATGTTAGAGTACAGAAATGGACTTGTTTACTCGGTGTATTCAGATGTGGTTTCAAATATT TACACAAACTCACTGCGTAACCTTAGGGCATTTAAATCTATGAAAAATGATAAGAGTAAC AATGGGAGCAATTTTTGTGGTAGAATTGTTGGTGAACTGGATTATGTTGTAAGTGACATT GATATGTTCAACGAGGCCATGGTCTTATATTTAATCAAACCACCAAGTTCCCCTACAGTG GGACTATTAAAGTTTTCTCCCCTAATTTCAAAAAATGTTACCAATGTTAGAAAACCAGAT AATAATGCTTTTGAGTTGGAAGTGTTGGAAATTCCAGTGGCAGTGGGACTAATTGAGCCT GGAATAAATATGAATTACAAAAACAAATCAGCCAAGTTTACAGTCAACACACCAGGGAAT TCTTGTCTAGGTTTTGAAGTAGATTTGGTAAATAAATTGGTAAAAAGCACAACACCAATA AACTCGAATGTTAAATCTATAGTCTTAAAAGCCCCGACCAGAGATGGGTCCTGTAATATA CCATTGACACTTGTTTCAAAGTTCTTAAATAATTATGACACTAAAAATGTAAAAAAAATT TTAGAGAATAGTGATTATTGTAAAATAGATGAAATATTCAATAGAAAGTGCGTGTTGTAT GTGTATGGGTTTTACGGAGAGAATTTGACAGTGTGTAATTACATGGAACACTCGAAACTG CTGGAAATGGGATACACACTCTGCTTCGCACACGTCAGAGGAGGAGGAGAATTGGGAGAA TCGTGGAGGGAAATGGGAAATAAAGAAAAGAAGTATAACTCGTTTTACGATCTTGTGGAC GTAATTCAGTTCTTAATTTCAAAGAATATTACAAGCAGAATCAAGTTGGCAATCAGCGTA TCCTCAGCGAGTGGAATTCTTGGAGGATGTATATACAATATGAGGCCAGACTTGTGTTCA ATAATCATATTCAAATTGCCCTATTTGGACCATTTTACTACATTAAACGATCGATCACAA CCGTTGGTGGAACTAGAATATGAAGAATTTGGAACTACTAAAGAAGATGAAGGAGAAGAA TATAATGTTGATCACGTATACTCAATTGACCCATGTGTAAACATGAAGAAAACTCAAGCT AAAAGACCGGCAATATTGATAAACTGTAACGTTAATGACACAAGAGCACCTTGGTACCAC ACAGCAAAGTTTTTAGATATACTTGAAAAACAAAAAGATAACGAAAATATCTTAGTAAAG GTAGGAGACTATGGCCATGAAGGACGCCCACCAGAACACTACCTAGTAAGAACCTGCGCA GAAGAAATATCAATAATTGATAATTTCCTAAAAGATTAA
  • Download Fasta

  • Fasta :-

    MSFNKLINRSSFLSKLFSQLSHRNRTFVSHSNNVRNSISYLNWVPESEKTNSFSKVDLEQ AVNSDNSLSFSRFILNYKNKVKELSSTISEIESFYKSNHEGLSDTSLEYEIIGKYAYYLV HNSSSLSLFRTPLQGYSRFRRLINELNNDDICKFLMERGKPLLDFSKISQQGISNIKKIR ISPGSDLIAIIYDPNLEDKHTLSIYSVSKGEISKTLEDIGEVYFMPYPKNSSFTRLYYTV LNPQKRSHKFCTSLIFNRTGNFCSNRLMYEDPKHFISLFKSKSGRVLFMATVSYNKVFSA YMITKSGKMFTVPIVSGSKLMLEYRNGLVYSVYSDVVSNIYTNSLRNLRAFKSMKNDKSN NGSNFCGRIVGELDYVVSDIDMFNEAMVLYLIKPPSSPTVGLLKFSPLISKNVTNVRKPD NNAFELEVLEIPVAVGLIEPGINMNYKNKSAKFTVNTPGNSCLGFEVDLVNKLVKSTTPI NSNVKSIVLKAPTRDGSCNIPLTLVSKFLNNYDTKNVKKILENSDYCKIDEIFNRKCVLY VYGFYGENLTVCNYMEHSKLLEMGYTLCFAHVRGGGELGESWREMGNKEKKYNSFYDLVD VIQFLISKNITSRIKLAISVSSASGILGGCIYNMRPDLCSIIIFKLPYLDHFTTLNDRSQ PLVELEYEEFGTTKEDEGEEYNVDHVYSIDPCVNMKKTQAKRPAILINCNVNDTRAPWYH TAKFLDILEKQKDNENILVKVGDYGHEGRPPEHYLVRTCAEEISIIDNFLKD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA08065397 SKPPSSPTVG0.992unspTA08065397 SKPPSSPTVG0.992unspTA08065397 SKPPSSPTVG0.992unspTA08065581 SELGESWREM0.994unspTA08065594 SKKYNSFYDL0.995unspTA0806554 STNSFSKVDL0.993unspTA08065182 SKIRISPGSD0.996unsp

TA08065      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India