TA08070 | proteasome subunit (alpha type 6 homologue), putative

_IDPredictionOTHERSPmTPCS_Position
TA08070OTHER0.9999040.0000500.000046
No Results

  • Fasta :-

    >TA08070 MSRASHSGYDRHITIFSPEGKLFQLEYALKAVKNCNLTGLAIKDDSAIAVVAQKKLPAQQ GNQDVLLDTSSVTSLYHITDEIFALLVGLPGDCLSILYKARQVALDYSYKYGINIPASVL CQKISDLNQVYTQHAYMRLHACTGLILSIEPDVGPKIYKFDSSGWFAGYKACGIGAKEQE SENALEKTLKRREAMSLQDAMKSNLHVNTEVHQLSQGQETKVTIEALRCMIDIDAFTKGL GASSIEVAVASKDNPFFRQLSEEEIETYLTHITESD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08070.fa Sequence name : TA08070 Sequence length : 276 VALUES OF COMPUTED PARAMETERS Coef20 : 3.600 CoefTot : -0.034 ChDiff : -7 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.329 1.841 0.314 0.692 MesoH : -0.407 0.473 -0.269 0.246 MuHd_075 : 9.814 6.950 4.629 3.183 MuHd_095 : 32.499 15.841 6.369 7.099 MuHd_100 : 28.608 13.518 5.397 6.405 MuHd_105 : 20.215 7.169 3.714 4.375 Hmax_075 : 7.000 2.683 0.558 3.302 Hmax_095 : 10.400 6.600 -0.347 3.760 Hmax_100 : 10.400 6.600 -0.347 3.760 Hmax_105 : 5.300 1.400 -1.255 2.580 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8834 0.1166 DFMC : 0.9449 0.0551
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 276 TA08070 MSRASHSGYDRHITIFSPEGKLFQLEYALKAVKNCNLTGLAIKDDSAIAVVAQKKLPAQQGNQDVLLDTSSVTSLYHITD 80 EIFALLVGLPGDCLSILYKARQVALDYSYKYGINIPASVLCQKISDLNQVYTQHAYMRLHACTGLILSIEPDVGPKIYKF 160 DSSGWFAGYKACGIGAKEQESENALEKTLKRREAMSLQDAMKSNLHVNTEVHQLSQGQETKVTIEALRCMIDIDAFTKGL 240 GASSIEVAVASKDNPFFRQLSEEEIETYLTHITESD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA08070 3 ----MSR|AS 0.106 . TA08070 11 SHSGYDR|HI 0.103 . TA08070 21 IFSPEGK|LF 0.061 . TA08070 30 QLEYALK|AV 0.071 . TA08070 33 YALKAVK|NC 0.053 . TA08070 43 LTGLAIK|DD 0.072 . TA08070 54 IAVVAQK|KL 0.068 . TA08070 55 AVVAQKK|LP 0.097 . TA08070 99 CLSILYK|AR 0.079 . TA08070 101 SILYKAR|QV 0.108 . TA08070 110 ALDYSYK|YG 0.067 . TA08070 123 ASVLCQK|IS 0.062 . TA08070 138 TQHAYMR|LH 0.090 . TA08070 156 EPDVGPK|IY 0.054 . TA08070 159 VGPKIYK|FD 0.070 . TA08070 170 GWFAGYK|AC 0.073 . TA08070 177 ACGIGAK|EQ 0.064 . TA08070 187 SENALEK|TL 0.071 . TA08070 190 ALEKTLK|RR 0.061 . TA08070 191 LEKTLKR|RE 0.126 . TA08070 192 EKTLKRR|EA 0.185 . TA08070 202 SLQDAMK|SN 0.089 . TA08070 221 SQGQETK|VT 0.074 . TA08070 228 VTIEALR|CM 0.079 . TA08070 238 DIDAFTK|GL 0.073 . TA08070 252 EVAVASK|DN 0.060 . TA08070 258 KDNPFFR|QL 0.192 . ____________________________^_________________

  • Fasta :-

    >TA08070 ATGTCTAGAGCTTCTCATAGCGGTTATGATAGGCATATTACTATTTTTTCACCTGAGGGA AAGTTATTTCAACTTGAATATGCCCTCAAGGCTGTCAAGAACTGTAACCTAACTGGCTTG GCCATCAAGGACGATTCTGCAATTGCAGTTGTTGCCCAGAAAAAACTTCCTGCTCAACAA GGGAACCAGGATGTTTTGCTGGACACCTCCTCTGTGACAAGCCTCTACCATATCACTGAT GAGATATTTGCTTTACTCGTTGGCTTACCAGGGGACTGCCTGAGTATACTATACAAGGCA AGGCAGGTGGCCTTGGACTATTCCTATAAGTATGGAATTAATATTCCAGCCAGCGTCCTG TGCCAGAAGATCTCCGACCTTAACCAAGTTTATACACAACACGCCTATATGAGACTACAC GCCTGCACTGGCCTTATTTTATCAATTGAGCCGGATGTTGGCCCCAAGATATACAAGTTT GATTCCTCAGGATGGTTCGCAGGATACAAGGCTTGCGGAATAGGAGCTAAGGAGCAGGAG TCTGAAAACGCACTTGAGAAGACTTTGAAAAGGAGGGAAGCAATGAGTCTCCAAGACGCA ATGAAATCTAACCTCCACGTTAACACTGAGGTCCACCAGCTTTCTCAAGGACAGGAAACA AAAGTAACAATCGAAGCACTCAGGTGTATGATTGACATTGATGCCTTCACCAAGGGCCTC GGCGCTTCTAGTATTGAAGTCGCAGTTGCATCGAAGGATAACCCCTTCTTCAGACAACTT AGTGAGGAGGAAATTGAGACCTATCTCACCCACATTACTGAAAGTGATTAA
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  • Fasta :-

    MSRASHSGYDRHITIFSPEGKLFQLEYALKAVKNCNLTGLAIKDDSAIAVVAQKKLPAQQ GNQDVLLDTSSVTSLYHITDEIFALLVGLPGDCLSILYKARQVALDYSYKYGINIPASVL CQKISDLNQVYTQHAYMRLHACTGLILSIEPDVGPKIYKFDSSGWFAGYKACGIGAKEQE SENALEKTLKRREAMSLQDAMKSNLHVNTEVHQLSQGQETKVTIEALRCMIDIDAFTKGL GASSIEVAVASKDNPFFRQLSEEEIETYLTHITESD

    No Results
  • title: active site
  • coordinates: L37,Q53,K55,S74,A176
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA08070196 SREAMSLQDA0.993unspTA08070196 SREAMSLQDA0.993unspTA08070196 SREAMSLQDA0.993unspTA08070261 SFRQLSEEEI0.997unspTA080705 SMSRASHSGY0.992unspTA080707 SRASHSGYDR0.995unsp

TA08070      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India